Gene annotation
| Transcriptome id |
Sobic.006G117600.1 |
|---|
| Synonym |
BGLU12, Sb06g019880 |
|---|
| Functional annotation |
Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed |
|---|
| UniProt |
A0A1Z5RDE7 |
|---|
| Pfam |
PF00232 |
|---|
| Panther DB |
PTHR10353
PTHR10353:SF47 |
|---|
| NCBI CDD |
- |
|---|
| KEGG Orthology |
K01188; beta-glucosidase |
|---|
| Gene Ontology |
GO:0005975; carbohydrate metabolic process
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds |
|---|
Orthologs (automatic annotation)
| TAIR |
AT5G42260 : beta glucosidase 12 |
|---|
| RAP-DB (Rice) |
LOC_Os04g39880.1 : Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed |
|---|
| MaizeGDB (Corn) |
Zm00025a011022 |
|---|
| Brachypodium |
PNT61292 |
|---|
| Barley |
HORVU2Hr1G082150.12
, HORVU2Hr1G082150.13
, HORVU2Hr1G082150.10
, HORVU2Hr1G082150.11
, HORVU2Hr1G082170.19
, HORVU2Hr1G082170.14
, HORVU2Hr1G082170.16
, HORVU2Hr1G082170.17
, HORVU2Hr1G082170.10
, HORVU2Hr1G082170.11
, HORVU2Hr1G082170.12
, HORVU2Hr1G082170.13
, HORVU2Hr1G082150.8
, HORVU2Hr1G082150.9
, HORVU2Hr1G082150.1
, HORVU2Hr1G082150.2
, HORVU2Hr1G082150.3
, HORVU2Hr1G082150.4
, HORVU2Hr1G082150.5
, HORVU2Hr1G082150.6
, HORVU2Hr1G082150.7
, HORVU2Hr1G082170.6
, HORVU2Hr1G082170.7
, HORVU2Hr1G082170.4
, HORVU2Hr1G082170.2
, HORVU2Hr1G082170.1
, HORVU2Hr1G082170.8
, HORVU2Hr1G082170.9
, HORVU2Hr1G082170.21
, HORVU2Hr1G082170.20
, HORVU2Hr1G082170.23
, HORVU2Hr1G082170.22
, HORVU2Hr1G082170.25
, HORVU2Hr1G082170.24
, HORVU2Hr1G082170.27
, HORVU2Hr1G082170.26
, HORVU2Hr1G082170.29
, HORVU2Hr1G082170.28
, HORVU3Hr1G097010.11
, HORVU2Hr1G082170.18
, HORVU2Hr1G082170.15
, HORVU2Hr1G082170.34
, HORVU2Hr1G082170.32
, HORVU2Hr1G082170.33 |
|---|
| Wheat |
TraesCS2D02G333700
, TraesCS2D02G333700
, TraesCS2D02G522600
, TraesCS2A02G329100
, TraesCS2A02G329100
, TraesCS2B02G353200
, TraesCS2A02G520900
, TraesCS2A02G329000 |
|---|
| Populus |
- |
|---|
JBrowse
Expression pattern by RNA-Seq analysis
| FPKM plot |
 |
Find similar expressed genes
| Top 20 genes with similar expressed profiles |
 |
| Rank |
Gene |
Function |
KEGG orthology |
|---|
| 1 |
Sobic.006G009700 |
expressed protein |
- |
| 2 |
Sobic.008G084900 |
D-mannose binding lectin family protein, expressed |
- |
| 3 |
Sobic.004G008600 |
receptor protein kinase CLAVATA1 precursor, putative, expressed |
- |
| 4 |
Sobic.005G216500 |
plant protein of unknown function domain containing protein, expressed |
- |
| 5 |
Sobic.002G238700 |
- |
- |
| 6 |
Sobic.010G269000 |
bZIP transcription factor domain containing protein, expressed |
- |
| 7 |
Sobic.002G019100 |
xyloglucan fucosyltransferase, putative, expressed |
K13681: xyloglucan fucosyltransferase |
| 8 |
Sobic.004G126500 |
- |
- |
| 9 |
Sobic.005G134200 |
"domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed |
K14487: auxin responsive GH3 gene family |
| 10 |
Sobic.010G115000 |
SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@limonoid UDP-glucosyltransferase, putative, expressed |
- |
| 11 |
Sobic.005G071900 |
expressed protein |
K13457: RPM1, disease resistance protein RPM1 |
| 12 |
Sobic.003G134600 |
expressed protein |
- |
| 13 |
Sobic.005G065700 |
glycine-rich cell wall structural protein 2 precursor, putative, expressed |
- |
| 14 |
Sobic.005G120900 |
expressed protein |
- |
| 15 |
Sobic.002G003400 |
peroxidase precursor, putative, expressed |
K00430: peroxidase |
| 16 |
Sobic.008G138700 |
MLA12, putative, expressed |
- |
| 17 |
Sobic.002G029600 |
CBS domain containing membrane protein, putative, expressed |
K00088: IMPDH, IMP dehydrogenase |
| 18 |
Sobic.005G226350 |
- |
- |
| 19 |
Sobic.007G094100 |
OsWAK108 - OsWAK receptor-like protein kinase, expressed |
- |
| 20 |
Sobic.003G046700 |
expressed protein |
- |
Gene co-expression network
|
|
Octagon: transcription factors
