Gene annotation
Transcriptome id Sobic.003G134600.1
Synonym Sb03g011450
Functional annotation expressed protein
UniProt A0A1B6Q2X2
Pfam -
Panther DB PTHR33095 PTHR33095:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g17420.1 : expressed protein
MaizeGDB (Corn) Zm00025a035183
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G117600 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
2 Sobic.010G115000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@limonoid UDP-glucosyltransferase, putative, expressed -
3 Sobic.007G094100 OsWAK108 - OsWAK receptor-like protein kinase, expressed -
4 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -
5 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
6 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
7 Sobic.003G046700 expressed protein -
8 Sobic.005G079100 dirigent, putative -
9 Sobic.004G009300 expressed protein -
10 Sobic.003G269900 OsSub12 - Putative Subtilisin homologue, expressed -
11 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
12 Sobic.009G018300 vrga1, putative, expressed -
13 Sobic.005G120900 expressed protein -
14 Sobic.008G084900 D-mannose binding lectin family protein, expressed -
15 Sobic.006G171300 expansin precursor, putative, expressed -
16 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.004G337950 - -
18 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
19 Sobic.007G097550 - -
20 Sobic.002G238700 - -


Gene co-expression network
sample Sobic003G134600 Sobic003G134600 Sobic006G117600 Sobic006G117600 Sobic003G134600--Sobic006G117600 Sobic010G115000 Sobic010G115000 Sobic003G134600--Sobic010G115000 Sobic007G094100 Sobic007G094100 Sobic003G134600--Sobic007G094100 Sobic005G216500 Sobic005G216500 Sobic003G134600--Sobic005G216500 Sobic004G008600 Sobic004G008600 Sobic003G134600--Sobic004G008600 Sobic010G269000 Sobic010G269000 Sobic003G134600--Sobic010G269000 Sobic003G046700 Sobic003G046700 Sobic003G134600--Sobic003G046700 Sobic005G079100 Sobic005G079100 Sobic003G134600--Sobic005G079100 Sobic004G009300 Sobic004G009300 Sobic003G134600--Sobic004G009300 Sobic006G009700 Sobic006G009700 Sobic006G117600--Sobic006G009700 Sobic008G084900 Sobic008G084900 Sobic006G117600--Sobic008G084900 Sobic006G117600--Sobic004G008600 Sobic006G117600--Sobic005G216500 Sobic002G238700 Sobic002G238700 Sobic006G117600--Sobic002G238700 Sobic006G117600--Sobic010G269000 Sobic002G019100 Sobic002G019100 Sobic006G117600--Sobic002G019100 Sobic004G126500 Sobic004G126500 Sobic006G117600--Sobic004G126500 Sobic005G134200 Sobic005G134200 Sobic006G117600--Sobic005G134200 Sobic010G115000--Sobic007G094100 Sobic003G269900 Sobic003G269900 Sobic010G115000--Sobic003G269900 Sobic010G115000--Sobic005G216500 Sobic010G115000--Sobic003G046700 Sobic010G115000--Sobic004G008600 Sobic006G171300 Sobic006G171300 Sobic010G115000--Sobic006G171300 Sobic010G139100 Sobic010G139100 Sobic010G115000--Sobic010G139100 Sobic010G115000--Sobic010G269000 Sobic010G115000--Sobic008G084900 Sobic007G094100--Sobic010G115000 Sobic007G094100--Sobic005G216500 Sobic007G094100--Sobic004G008600 Sobic007G094100--Sobic010G269000 Sobic007G094100--Sobic004G009300 Sobic007G094100--Sobic003G046700 Sobic007G094100--Sobic006G171300 Sobic009G018300 Sobic009G018300 Sobic007G094100--Sobic009G018300 Sobic005G120900 Sobic005G120900 Sobic007G094100--Sobic005G120900 Sobic005G216500--Sobic004G008600 Sobic005G216500--Sobic010G269000 Sobic005G216500--Sobic003G046700 Sobic005G216500--Sobic005G134200 Sobic005G216500--Sobic008G084900 Sobic007G220400 Sobic007G220400 Sobic005G216500--Sobic007G220400 Sobic002G115600 Sobic002G115600 Sobic005G216500--Sobic002G115600 Sobic005G216500--Sobic007G094100 Sobic005G216500--Sobic010G115000 Sobic004G008600--Sobic010G269000 Sobic004G008600--Sobic005G134200 Sobic004G008600--Sobic005G216500 Sobic004G008600--Sobic003G046700 Sobic005G226350 Sobic005G226350 Sobic004G008600--Sobic005G226350 Sobic004G008600--Sobic005G120900 Sobic004G008600--Sobic007G220400 Sobic005G226400 Sobic005G226400 Sobic004G008600--Sobic005G226400 Sobic010G191700 Sobic010G191700 Sobic004G008600--Sobic010G191700 Sobic010G269000--Sobic004G008600 Sobic010G269000--Sobic005G134200 Sobic010G269000--Sobic003G046700 Sobic010G269000--Sobic005G120900 Sobic010G269000--Sobic005G216500 Sobic010G269000--Sobic005G226350 Sobic010G269000--Sobic007G220400 Sobic010G269000--Sobic005G226400 Sobic010G241900 Sobic010G241900 Sobic010G269000--Sobic010G241900 Sobic002G334000 Sobic002G334000 Sobic003G046700--Sobic002G334000 Sobic003G046700--Sobic010G269000 Sobic003G046700--Sobic004G008600 Sobic003G046700--Sobic005G216500 Sobic003G046700--Sobic005G226350 Sobic003G046700--Sobic007G220400 Sobic003G046700--Sobic010G191700 Sobic003G046700--Sobic009G018300 Sobic003G046700--Sobic010G241900 Sobic005G079100--Sobic005G216500 Sobic005G079100--Sobic005G134200 Sobic005G079100--Sobic007G220400 Sobic004G119900 Sobic004G119900 Sobic005G079100--Sobic004G119900 Sobic005G079100--Sobic010G269000 Sobic005G079100--Sobic010G241900 Sobic009G032900 Sobic009G032900 Sobic005G079100--Sobic009G032900 Sobic005G079100--Sobic003G046700 Sobic005G079100--Sobic002G334000 Sobic004G009300--Sobic009G018300 Sobic002G392300 Sobic002G392300 Sobic004G009300--Sobic002G392300 Sobic004G009300--Sobic007G094100 Sobic004G337950 Sobic004G337950 Sobic004G009300--Sobic004G337950 Sobic006G135500 Sobic006G135500 Sobic004G009300--Sobic006G135500 Sobic004G009300--Sobic003G046700 Sobic004G009300--Sobic004G119900 Sobic001G233100 Sobic001G233100 Sobic004G009300--Sobic001G233100 Sobic001G521600 Sobic001G521600 Sobic004G009300--Sobic001G521600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.