Gene annotation
Transcriptome id Sobic.002G238700.1
Synonym Sb02g027650
Functional annotation -
UniProt C5X3P4
Pfam -
Panther DB PTHR35420
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G009700 expressed protein -
2 Sobic.001G238500 similar to Putative uncharacterized protein(PubMedID : 29862293)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
3 Sobic.005G066500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
4 Sobic.008G084900 D-mannose binding lectin family protein, expressed -
5 Sobic.004G126500 - -
6 Sobic.005G065700 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
7 Sobic.005G071900 expressed protein K13457: RPM1, disease resistance protein RPM1
8 Sobic.008G138700 MLA12, putative, expressed -
9 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G348800 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
11 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
12 Sobic.002G019100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
13 Sobic.001G506700 exostosin family domain containing protein, expressed -
14 Sobic.004G312500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@nitrate reductase, putative, expressed K10534: nitrate reductase (NAD(P)H)
15 Sobic.002G411000 AP2 domain containing protein, expressed -
16 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -
17 Sobic.007G020700 ACT domain containing protein, expressed -
18 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
19 Sobic.006G117600 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
20 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -


Gene co-expression network
sample Sobic002G238700 Sobic002G238700 Sobic006G009700 Sobic006G009700 Sobic002G238700--Sobic006G009700 Sobic001G238500 Sobic001G238500 Sobic002G238700--Sobic001G238500 Sobic005G066500 Sobic005G066500 Sobic002G238700--Sobic005G066500 Sobic008G084900 Sobic008G084900 Sobic002G238700--Sobic008G084900 Sobic004G126500 Sobic004G126500 Sobic002G238700--Sobic004G126500 Sobic005G065700 Sobic005G065700 Sobic002G238700--Sobic005G065700 Sobic005G071900 Sobic005G071900 Sobic002G238700--Sobic005G071900 Sobic008G138700 Sobic008G138700 Sobic002G238700--Sobic008G138700 Sobic005G104200 Sobic005G104200 Sobic002G238700--Sobic005G104200 Sobic006G009700--Sobic008G138700 Sobic004G312500 Sobic004G312500 Sobic006G009700--Sobic004G312500 Sobic006G009700--Sobic005G071900 Sobic002G019100 Sobic002G019100 Sobic006G009700--Sobic002G019100 Sobic006G009700--Sobic004G126500 Sobic006G009700--Sobic001G238500 Sobic006G009700--Sobic005G066500 Sobic006G009700--Sobic002G238700 Sobic006G108300 Sobic006G108300 Sobic006G009700--Sobic006G108300 Sobic001G238500--Sobic004G126500 Sobic001G238500--Sobic005G104200 Sobic001G238500--Sobic006G009700 Sobic001G238500--Sobic002G238700 Sobic001G238500--Sobic002G019100 Sobic001G348800 Sobic001G348800 Sobic001G238500--Sobic001G348800 Sobic002G411000 Sobic002G411000 Sobic001G238500--Sobic002G411000 Sobic009G015166 Sobic009G015166 Sobic001G238500--Sobic009G015166 Sobic001G506700 Sobic001G506700 Sobic001G238500--Sobic001G506700 Sobic005G110511 Sobic005G110511 Sobic005G066500--Sobic005G110511 Sobic005G066500--Sobic005G065700 Sobic005G066500--Sobic005G071900 Sobic005G066500--Sobic008G138700 Sobic005G066500--Sobic004G312500 Sobic005G197350 Sobic005G197350 Sobic005G066500--Sobic005G197350 Sobic005G066500--Sobic006G009700 Sobic002G019000 Sobic002G019000 Sobic005G066500--Sobic002G019000 Sobic005G066500--Sobic002G411000 Sobic005G216500 Sobic005G216500 Sobic008G084900--Sobic005G216500 Sobic004G008600 Sobic004G008600 Sobic008G084900--Sobic004G008600 Sobic010G269000 Sobic010G269000 Sobic008G084900--Sobic010G269000 Sobic008G084900--Sobic002G238700 Sobic008G084900--Sobic002G019100 Sobic008G084900--Sobic006G009700 Sobic005G134200 Sobic005G134200 Sobic008G084900--Sobic005G134200 Sobic002G115600 Sobic002G115600 Sobic008G084900--Sobic002G115600 Sobic002G003400 Sobic002G003400 Sobic008G084900--Sobic002G003400 Sobic004G126500--Sobic001G238500 Sobic004G126500--Sobic006G009700 Sobic004G126500--Sobic005G104200 Sobic004G126500--Sobic002G238700 Sobic004G126500--Sobic002G019100 Sobic004G126500--Sobic001G348800 Sobic004G126500--Sobic008G084900 Sobic004G126500--Sobic004G312500 Sobic004G126500--Sobic009G015166 Sobic005G065700--Sobic002G019000 Sobic005G065700--Sobic005G071900 Sobic005G182900 Sobic005G182900 Sobic005G065700--Sobic005G182900 Sobic005G065700--Sobic005G066500 Sobic005G065700--Sobic005G110511 Sobic010G213600 Sobic010G213600 Sobic005G065700--Sobic010G213600 Sobic003G079100 Sobic003G079100 Sobic005G065700--Sobic003G079100 Sobic008G033100 Sobic008G033100 Sobic005G065700--Sobic008G033100 Sobic010G242800 Sobic010G242800 Sobic005G065700--Sobic010G242800 Sobic005G071900--Sobic005G065700 Sobic005G071900--Sobic004G312500 Sobic005G071900--Sobic005G066500 Sobic005G071900--Sobic005G110511 Sobic005G071900--Sobic006G108300 Sobic005G071900--Sobic006G009700 Sobic005G071900--Sobic008G138700 Sobic005G071900--Sobic003G079100 Sobic002G029600 Sobic002G029600 Sobic005G071900--Sobic002G029600 Sobic008G138700--Sobic006G009700 Sobic009G060700 Sobic009G060700 Sobic008G138700--Sobic009G060700 Sobic008G138700--Sobic005G066500 Sobic008G138700--Sobic005G065700 Sobic008G138700--Sobic005G110511 Sobic008G138700--Sobic005G071900 Sobic008G138700--Sobic004G312500 Sobic006G092100 Sobic006G092100 Sobic008G138700--Sobic006G092100 Sobic008G138700--Sobic010G213600 Sobic005G104200--Sobic001G238500 Sobic001G506600 Sobic001G506600 Sobic005G104200--Sobic001G506600 Sobic005G104200--Sobic002G019100 Sobic001G503000 Sobic001G503000 Sobic005G104200--Sobic001G503000 Sobic006G117500 Sobic006G117500 Sobic005G104200--Sobic006G117500 Sobic005G104200--Sobic004G126500 Sobic005G104200--Sobic006G009700 Sobic005G104200--Sobic002G411000 Sobic005G104200--Sobic001G348800
Octagon: transcription factors


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