Gene annotation
Transcriptome id Sobic.003G017601.1
Synonym -
Functional annotation -
UniProt A0A1B6Q0Z4
Pfam PF00010
Panther DB PTHR12565 PTHR12565:SF181
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G68810 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os01g11910.1 : basic helix-loop-helix, putative, expressed
MaizeGDB (Corn) Zm00025a022896
Brachypodium -
Barley HORVU3Hr1G027630.1 , HORVU3Hr1G027630.2 , HORVU3Hr1G027630.3
Wheat TraesCS3A02G142900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G218500 MATH domain containing protein, expressed -
2 Sobic.001G342000 expressed protein -
3 Sobic.002G183750 - -
4 Sobic.002G111900 receptor-like kinase, putative, expressed -
5 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
6 Sobic.010G213600 histidine kinase, putative, expressed -
7 Sobic.003G020500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.005G223700 RGH1A, putative, expressed -
9 Sobic.005G175900 expressed protein -
10 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
11 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
12 Sobic.001G218400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MATH domain containing protein, expressed -
13 Sobic.002G082000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
14 Sobic.005G071900 expressed protein K13457: RPM1, disease resistance protein RPM1
15 Sobic.006G171100 expansin precursor, putative, expressed -
16 Sobic.007G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed -
17 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
18 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -
19 Sobic.010G152500 glycosyltransferase, putative, expressed -
20 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase


Gene co-expression network
sample Sobic003G017601 Sobic003G017601 Sobic001G218500 Sobic001G218500 Sobic003G017601--Sobic001G218500 Sobic001G342000 Sobic001G342000 Sobic003G017601--Sobic001G342000 Sobic002G183750 Sobic002G183750 Sobic003G017601--Sobic002G183750 Sobic002G111900 Sobic002G111900 Sobic003G017601--Sobic002G111900 Sobic003G079100 Sobic003G079100 Sobic003G017601--Sobic003G079100 Sobic010G213600 Sobic010G213600 Sobic003G017601--Sobic010G213600 Sobic003G020500 Sobic003G020500 Sobic003G017601--Sobic003G020500 Sobic005G223700 Sobic005G223700 Sobic003G017601--Sobic005G223700 Sobic005G175900 Sobic005G175900 Sobic003G017601--Sobic005G175900 Sobic001G218500--Sobic003G020500 Sobic004G014600 Sobic004G014600 Sobic001G218500--Sobic004G014600 Sobic001G218500--Sobic003G079100 Sobic001G218500--Sobic001G342000 Sobic001G218500--Sobic002G111900 Sobic009G165100 Sobic009G165100 Sobic001G218500--Sobic009G165100 Sobic002G029600 Sobic002G029600 Sobic001G218500--Sobic002G029600 Sobic001G218500--Sobic003G017601 Sobic003G441601 Sobic003G441601 Sobic001G218500--Sobic003G441601 Sobic001G342000--Sobic004G014600 Sobic001G342000--Sobic010G213600 Sobic008G033100 Sobic008G033100 Sobic001G342000--Sobic008G033100 Sobic002G166150 Sobic002G166150 Sobic001G342000--Sobic002G166150 Sobic002G029500 Sobic002G029500 Sobic001G342000--Sobic002G029500 Sobic001G342000--Sobic009G165100 Sobic001G342000--Sobic003G079100 Sobic001G272800 Sobic001G272800 Sobic001G342000--Sobic001G272800 Sobic003G255600 Sobic003G255600 Sobic001G342000--Sobic003G255600 Sobic010G028100 Sobic010G028100 Sobic002G183750--Sobic010G028100 Sobic001G218400 Sobic001G218400 Sobic002G183750--Sobic001G218400 Sobic004G119800 Sobic004G119800 Sobic002G183750--Sobic004G119800 Sobic006G135300 Sobic006G135300 Sobic002G183750--Sobic006G135300 Sobic001G274400 Sobic001G274400 Sobic002G183750--Sobic001G274400 Sobic002G183750--Sobic003G017601 Sobic010G070400 Sobic010G070400 Sobic002G183750--Sobic010G070400 Sobic006G092700 Sobic006G092700 Sobic002G183750--Sobic006G092700 Sobic004G121600 Sobic004G121600 Sobic002G183750--Sobic004G121600 Sobic010G191700 Sobic010G191700 Sobic002G111900--Sobic010G191700 Sobic002G391300 Sobic002G391300 Sobic002G111900--Sobic002G391300 Sobic002G111900--Sobic003G441601 Sobic007G220400 Sobic007G220400 Sobic002G111900--Sobic007G220400 Sobic010G241900 Sobic010G241900 Sobic002G111900--Sobic010G241900 Sobic010G010000 Sobic010G010000 Sobic002G111900--Sobic010G010000 Sobic006G171100 Sobic006G171100 Sobic002G111900--Sobic006G171100 Sobic005G046400 Sobic005G046400 Sobic002G111900--Sobic005G046400 Sobic006G059800 Sobic006G059800 Sobic002G111900--Sobic006G059800 Sobic003G079100--Sobic002G029600 Sobic003G079100--Sobic004G014600 Sobic005G065700 Sobic005G065700 Sobic003G079100--Sobic005G065700 Sobic003G079100--Sobic002G029500 Sobic005G182800 Sobic005G182800 Sobic003G079100--Sobic005G182800 Sobic003G079100--Sobic010G213600 Sobic005G182900 Sobic005G182900 Sobic003G079100--Sobic005G182900 Sobic010G152500 Sobic010G152500 Sobic003G079100--Sobic010G152500 Sobic005G071900 Sobic005G071900 Sobic003G079100--Sobic005G071900 Sobic010G213600--Sobic008G033100 Sobic010G213600--Sobic005G065700 Sobic002G019000 Sobic002G019000 Sobic010G213600--Sobic002G019000 Sobic010G213600--Sobic004G014600 Sobic010G213600--Sobic005G182900 Sobic010G213600--Sobic009G165100 Sobic010G213600--Sobic003G079100 Sobic003G161400 Sobic003G161400 Sobic010G213600--Sobic003G161400 Sobic010G213600--Sobic001G342000 Sobic003G020500--Sobic001G218500 Sobic003G020500--Sobic002G111900 Sobic003G020500--Sobic003G079100 Sobic003G020500--Sobic002G391300 Sobic003G020500--Sobic003G441601 Sobic003G020500--Sobic004G014600 Sobic002G289500 Sobic002G289500 Sobic003G020500--Sobic002G289500 Sobic003G020500--Sobic006G171100 Sobic003G020500--Sobic002G029500 Sobic005G226400 Sobic005G226400 Sobic005G223700--Sobic005G226400 Sobic005G223700--Sobic006G171100 Sobic005G223700--Sobic002G111900 Sobic005G223700--Sobic007G220400 Sobic006G047200 Sobic006G047200 Sobic005G223700--Sobic006G047200 Sobic009G136800 Sobic009G136800 Sobic005G223700--Sobic009G136800 Sobic005G223700--Sobic010G010000 Sobic005G134200 Sobic005G134200 Sobic005G223700--Sobic005G134200 Sobic005G223700--Sobic010G213600 Sobic001G263300 Sobic001G263300 Sobic005G175900--Sobic001G263300 Sobic006G196400 Sobic006G196400 Sobic005G175900--Sobic006G196400 Sobic002G115600 Sobic002G115600 Sobic005G175900--Sobic002G115600 Sobic003G215300 Sobic003G215300 Sobic005G175900--Sobic003G215300 Sobic007G090600 Sobic007G090600 Sobic005G175900--Sobic007G090600 Sobic006G031100 Sobic006G031100 Sobic005G175900--Sobic006G031100 Sobic002G003400 Sobic002G003400 Sobic005G175900--Sobic002G003400 Sobic010G082000 Sobic010G082000 Sobic005G175900--Sobic010G082000 Sobic003G240400 Sobic003G240400 Sobic005G175900--Sobic003G240400
Octagon: transcription factors


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