Gene annotation
Transcriptome id Sobic.005G223700.1
Synonym Sb05g027280
Functional annotation RGH1A, putative, expressed
UniProt A0A1Z5RK09 , C5Y8F1
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF484
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46530 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g37880.1 : stripe rust resistance protein Yr10, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ86319 , PNT62521 , PNT62520 , PNT62519
Barley -
Wheat TraesCS7A02G064000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G226400 RGH1A, putative, expressed -
2 Sobic.006G171100 expansin precursor, putative, expressed -
3 Sobic.002G111900 receptor-like kinase, putative, expressed -
4 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
5 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
7 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -
8 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
9 Sobic.010G213600 histidine kinase, putative, expressed -
10 Sobic.005G035900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
11 Sobic.005G226350 - -
12 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
13 Sobic.001G342000 expressed protein -
14 Sobic.010G191700 cytochrome P450, putative, expressed -
15 Sobic.006G059800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
16 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
17 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.003G441601 - -
19 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic005G223700 Sobic005G223700 Sobic005G226400 Sobic005G226400 Sobic005G223700--Sobic005G226400 Sobic006G171100 Sobic006G171100 Sobic005G223700--Sobic006G171100 Sobic002G111900 Sobic002G111900 Sobic005G223700--Sobic002G111900 Sobic007G220400 Sobic007G220400 Sobic005G223700--Sobic007G220400 Sobic006G047200 Sobic006G047200 Sobic005G223700--Sobic006G047200 Sobic009G136800 Sobic009G136800 Sobic005G223700--Sobic009G136800 Sobic010G010000 Sobic010G010000 Sobic005G223700--Sobic010G010000 Sobic005G134200 Sobic005G134200 Sobic005G223700--Sobic005G134200 Sobic010G213600 Sobic010G213600 Sobic005G223700--Sobic010G213600 Sobic005G226400--Sobic005G134200 Sobic005G226400--Sobic009G136800 Sobic010G128300 Sobic010G128300 Sobic005G226400--Sobic010G128300 Sobic002G391300 Sobic002G391300 Sobic005G226400--Sobic002G391300 Sobic005G226400--Sobic006G171100 Sobic005G226400--Sobic005G223700 Sobic005G226400--Sobic006G047200 Sobic005G226350 Sobic005G226350 Sobic005G226400--Sobic005G226350 Sobic005G226400--Sobic010G010000 Sobic006G171100--Sobic009G136800 Sobic006G171100--Sobic002G391300 Sobic006G171100--Sobic010G010000 Sobic003G441601 Sobic003G441601 Sobic006G171100--Sobic003G441601 Sobic006G171100--Sobic002G111900 Sobic005G046400 Sobic005G046400 Sobic006G171100--Sobic005G046400 Sobic002G289500 Sobic002G289500 Sobic006G171100--Sobic002G289500 Sobic006G171100--Sobic005G226400 Sobic006G171100--Sobic006G047200 Sobic010G191700 Sobic010G191700 Sobic002G111900--Sobic010G191700 Sobic002G111900--Sobic002G391300 Sobic002G111900--Sobic003G441601 Sobic002G111900--Sobic007G220400 Sobic010G241900 Sobic010G241900 Sobic002G111900--Sobic010G241900 Sobic002G111900--Sobic010G010000 Sobic002G111900--Sobic006G171100 Sobic002G111900--Sobic005G046400 Sobic006G059800 Sobic006G059800 Sobic002G111900--Sobic006G059800 Sobic007G220400--Sobic010G241900 Sobic007G220400--Sobic010G191700 Sobic007G206800 Sobic007G206800 Sobic007G220400--Sobic007G206800 Sobic007G220400--Sobic002G111900 Sobic007G220400--Sobic005G226350 Sobic002G391400 Sobic002G391400 Sobic007G220400--Sobic002G391400 Sobic007G220400--Sobic005G134200 Sobic007G220400--Sobic010G128300 Sobic002G334000 Sobic002G334000 Sobic007G220400--Sobic002G334000 Sobic005G035900 Sobic005G035900 Sobic006G047200--Sobic005G035900 Sobic005G205400 Sobic005G205400 Sobic006G047200--Sobic005G205400 Sobic008G084800 Sobic008G084800 Sobic006G047200--Sobic008G084800 Sobic002G392000 Sobic002G392000 Sobic006G047200--Sobic002G392000 Sobic001G234100 Sobic001G234100 Sobic006G047200--Sobic001G234100 Sobic005G101000 Sobic005G101000 Sobic006G047200--Sobic005G101000 Sobic006G047200--Sobic009G136800 Sobic006G047200--Sobic010G241900 Sobic006G047200--Sobic005G134200 Sobic009G136800--Sobic006G171100 Sobic009G136800--Sobic002G391300 Sobic009G136800--Sobic005G226400 Sobic009G136800--Sobic010G010000 Sobic002G063700 Sobic002G063700 Sobic009G136800--Sobic002G063700 Sobic009G136800--Sobic010G128300 Sobic009G136800--Sobic006G047200 Sobic009G136800--Sobic002G392000 Sobic009G136800--Sobic002G289500 Sobic010G010000--Sobic006G171100 Sobic010G010000--Sobic002G111900 Sobic010G010000--Sobic003G441601 Sobic010G010000--Sobic002G391300 Sobic010G010000--Sobic009G136800 Sobic009G055300 Sobic009G055300 Sobic010G010000--Sobic009G055300 Sobic010G010000--Sobic002G289500 Sobic010G010000--Sobic005G226400 Sobic010G010000--Sobic002G063700 Sobic010G269000 Sobic010G269000 Sobic005G134200--Sobic010G269000 Sobic004G008600 Sobic004G008600 Sobic005G134200--Sobic004G008600 Sobic005G134200--Sobic005G226400 Sobic005G134200--Sobic002G391300 Sobic005G134200--Sobic010G191700 Sobic005G134200--Sobic010G241900 Sobic005G134200--Sobic010G128300 Sobic005G134200--Sobic007G220400 Sobic005G134200--Sobic006G047200 Sobic008G033100 Sobic008G033100 Sobic010G213600--Sobic008G033100 Sobic005G065700 Sobic005G065700 Sobic010G213600--Sobic005G065700 Sobic002G019000 Sobic002G019000 Sobic010G213600--Sobic002G019000 Sobic004G014600 Sobic004G014600 Sobic010G213600--Sobic004G014600 Sobic005G182900 Sobic005G182900 Sobic010G213600--Sobic005G182900 Sobic009G165100 Sobic009G165100 Sobic010G213600--Sobic009G165100 Sobic003G079100 Sobic003G079100 Sobic010G213600--Sobic003G079100 Sobic003G161400 Sobic003G161400 Sobic010G213600--Sobic003G161400 Sobic001G342000 Sobic001G342000 Sobic010G213600--Sobic001G342000
Octagon: transcription factors


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