Gene annotation
Transcriptome id Sobic.001G239200.1
Synonym Sb01g021170
Functional annotation hsp20/alpha crystallin family protein, putative, expressed
UniProt C5X0J4
Pfam PF00011
Panther DB PTHR11527 PTHR11527:SF117
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G27140 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os10g30180.1 : hsp20/alpha crystallin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a017754
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G219600 protein kinase domain containing protein, expressed -
2 Sobic.006G135300 expressed protein -
3 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
4 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
5 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
6 Sobic.001G067800 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
7 Sobic.007G073000 - -
8 Sobic.006G266800 aspartic proteinase nepenthesin precursor, putative, expressed -
9 Sobic.009G259800 zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
10 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
11 Sobic.001G218500 MATH domain containing protein, expressed -
12 Sobic.001G149400 ankyrin repeat domain-containing protein 50, putative, expressed -
13 Sobic.002G259100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@auxin responsive protein, putative, expressed K14488: SAUR family protein
14 Sobic.004G322000 hypro1, putative, expressed -
15 Sobic.009G165100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
16 Sobic.006G196400 U-box, putative, expressed -
17 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
18 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
19 Sobic.005G052700 ZOS11-01 - C2H2 zinc finger protein, expressed -
20 Sobic.002G195600 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase


Gene co-expression network
sample Sobic001G239200 Sobic001G239200 Sobic005G219600 Sobic005G219600 Sobic001G239200--Sobic005G219600 Sobic006G135300 Sobic006G135300 Sobic001G239200--Sobic006G135300 Sobic001G274400 Sobic001G274400 Sobic001G239200--Sobic001G274400 Sobic004G014600 Sobic004G014600 Sobic001G239200--Sobic004G014600 Sobic003G215300 Sobic003G215300 Sobic001G239200--Sobic003G215300 Sobic001G067800 Sobic001G067800 Sobic001G239200--Sobic001G067800 Sobic007G073000 Sobic007G073000 Sobic001G239200--Sobic007G073000 Sobic006G266800 Sobic006G266800 Sobic001G239200--Sobic006G266800 Sobic009G259800 Sobic009G259800 Sobic001G239200--Sobic009G259800 Sobic005G219600--Sobic001G067800 Sobic001G218500 Sobic001G218500 Sobic005G219600--Sobic001G218500 Sobic005G219600--Sobic001G239200 Sobic003G020500 Sobic003G020500 Sobic005G219600--Sobic003G020500 Sobic003G255600 Sobic003G255600 Sobic005G219600--Sobic003G255600 Sobic005G219600--Sobic001G274400 Sobic005G219600--Sobic006G135300 Sobic004G271800 Sobic004G271800 Sobic005G219600--Sobic004G271800 Sobic004G322000 Sobic004G322000 Sobic005G219600--Sobic004G322000 Sobic006G092700 Sobic006G092700 Sobic006G135300--Sobic006G092700 Sobic010G082000 Sobic010G082000 Sobic006G135300--Sobic010G082000 Sobic006G135300--Sobic007G073000 Sobic010G028100 Sobic010G028100 Sobic006G135300--Sobic010G028100 Sobic006G019700 Sobic006G019700 Sobic006G135300--Sobic006G019700 Sobic010G152400 Sobic010G152400 Sobic006G135300--Sobic010G152400 Sobic003G322100 Sobic003G322100 Sobic006G135300--Sobic003G322100 Sobic004G306900 Sobic004G306900 Sobic006G135300--Sobic004G306900 Sobic002G146000 Sobic002G146000 Sobic006G135300--Sobic002G146000 Sobic001G274400--Sobic004G014600 Sobic009G165100 Sobic009G165100 Sobic001G274400--Sobic009G165100 Sobic010G152500 Sobic010G152500 Sobic001G274400--Sobic010G152500 Sobic001G274400--Sobic004G322000 Sobic003G382200 Sobic003G382200 Sobic001G274400--Sobic003G382200 Sobic007G090600 Sobic007G090600 Sobic001G274400--Sobic007G090600 Sobic002G029600 Sobic002G029600 Sobic001G274400--Sobic002G029600 Sobic006G031100 Sobic006G031100 Sobic001G274400--Sobic006G031100 Sobic001G274400--Sobic006G135300 Sobic003G441601 Sobic003G441601 Sobic004G014600--Sobic003G441601 Sobic004G014600--Sobic007G090600 Sobic004G014600--Sobic009G165100 Sobic005G182800 Sobic005G182800 Sobic004G014600--Sobic005G182800 Sobic003G079100 Sobic003G079100 Sobic004G014600--Sobic003G079100 Sobic010G213600 Sobic010G213600 Sobic004G014600--Sobic010G213600 Sobic005G182900 Sobic005G182900 Sobic004G014600--Sobic005G182900 Sobic004G014600--Sobic006G031100 Sobic002G289500 Sobic002G289500 Sobic004G014600--Sobic002G289500 Sobic003G215300--Sobic007G090600 Sobic003G215300--Sobic006G031100 Sobic002G115600 Sobic002G115600 Sobic003G215300--Sobic002G115600 Sobic003G240400 Sobic003G240400 Sobic003G215300--Sobic003G240400 Sobic006G196400 Sobic006G196400 Sobic003G215300--Sobic006G196400 Sobic001G263300 Sobic001G263300 Sobic003G215300--Sobic001G263300 Sobic003G215300--Sobic007G073000 Sobic001G503000 Sobic001G503000 Sobic003G215300--Sobic001G503000 Sobic003G215300--Sobic002G029600 Sobic001G067800--Sobic005G219600 Sobic001G067800--Sobic001G218500 Sobic001G067800--Sobic003G255600 Sobic001G067800--Sobic001G239200 Sobic004G193500 Sobic004G193500 Sobic001G067800--Sobic004G193500 Sobic009G079900 Sobic009G079900 Sobic001G067800--Sobic009G079900 Sobic001G067800--Sobic003G079100 Sobic001G067800--Sobic002G029600 Sobic001G067800--Sobic003G020500 Sobic007G073000--Sobic006G092700 Sobic007G073000--Sobic003G322100 Sobic007G073000--Sobic003G215300 Sobic007G073000--Sobic002G146000 Sobic007G073000--Sobic006G135300 Sobic002G195600 Sobic002G195600 Sobic007G073000--Sobic002G195600 Sobic007G073000--Sobic010G082000 Sobic007G090472 Sobic007G090472 Sobic007G073000--Sobic007G090472 Sobic007G073000--Sobic003G240400 Sobic006G266800--Sobic002G195600 Sobic006G266800--Sobic003G215300 Sobic007G007300 Sobic007G007300 Sobic006G266800--Sobic007G007300 Sobic006G266800--Sobic001G503000 Sobic006G266800--Sobic007G073000 Sobic006G266800--Sobic006G196400 Sobic006G266800--Sobic002G115600 Sobic006G266800--Sobic004G322000 Sobic008G138900 Sobic008G138900 Sobic006G266800--Sobic008G138900 Sobic005G080600 Sobic005G080600 Sobic009G259800--Sobic005G080600 Sobic003G185300 Sobic003G185300 Sobic009G259800--Sobic003G185300 Sobic007G206800 Sobic007G206800 Sobic009G259800--Sobic007G206800 Sobic009G259800--Sobic006G019700 Sobic007G100700 Sobic007G100700 Sobic009G259800--Sobic007G100700 Sobic009G259800--Sobic006G196400 Sobic002G068000 Sobic002G068000 Sobic009G259800--Sobic002G068000 Sobic010G234500 Sobic010G234500 Sobic009G259800--Sobic010G234500 Sobic003G426500 Sobic003G426500 Sobic009G259800--Sobic003G426500
Octagon: transcription factors


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