Gene annotation
Transcriptome id Sobic.005G219600.3,Sobic.005G219600.2,Sobic.005G219600.1
Synonym CRK10, RLK4
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1B6PU17 , A0A1Z5RKC2 , A0A1Z5RJU3
Pfam PF00069 PF07714
Panther DB PTHR27002 PTHR27002:SF115
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G61440 : S-locus lectin protein kinase family protein,Leucine-rich repeat transmembrane protein kinase,cysteine-rich RLK (RECEPTOR-like protein kinase) 10
RAP-DB (Rice) LOC_Os12g14699.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G067800 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
2 Sobic.001G218500 MATH domain containing protein, expressed -
3 Sobic.001G239200 hsp20/alpha crystallin family protein, putative, expressed -
4 Sobic.003G020500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.003G255600 expressed protein -
6 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
7 Sobic.006G135300 expressed protein -
8 Sobic.004G271800 WRKY66, expressed -
9 Sobic.004G322000 hypro1, putative, expressed -
10 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
11 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
12 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
13 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
14 Sobic.005G175900 expressed protein -
15 Sobic.009G259800 zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
16 Sobic.002G111900 receptor-like kinase, putative, expressed -
17 Sobic.003G017601 - -
18 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
19 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
20 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -


Gene co-expression network
sample Sobic005G219600 Sobic005G219600 Sobic001G067800 Sobic001G067800 Sobic005G219600--Sobic001G067800 Sobic001G218500 Sobic001G218500 Sobic005G219600--Sobic001G218500 Sobic001G239200 Sobic001G239200 Sobic005G219600--Sobic001G239200 Sobic003G020500 Sobic003G020500 Sobic005G219600--Sobic003G020500 Sobic003G255600 Sobic003G255600 Sobic005G219600--Sobic003G255600 Sobic001G274400 Sobic001G274400 Sobic005G219600--Sobic001G274400 Sobic006G135300 Sobic006G135300 Sobic005G219600--Sobic006G135300 Sobic004G271800 Sobic004G271800 Sobic005G219600--Sobic004G271800 Sobic004G322000 Sobic004G322000 Sobic005G219600--Sobic004G322000 Sobic001G067800--Sobic005G219600 Sobic001G067800--Sobic001G218500 Sobic001G067800--Sobic003G255600 Sobic001G067800--Sobic001G239200 Sobic004G193500 Sobic004G193500 Sobic001G067800--Sobic004G193500 Sobic009G079900 Sobic009G079900 Sobic001G067800--Sobic009G079900 Sobic003G079100 Sobic003G079100 Sobic001G067800--Sobic003G079100 Sobic002G029600 Sobic002G029600 Sobic001G067800--Sobic002G029600 Sobic001G067800--Sobic003G020500 Sobic001G218500--Sobic003G020500 Sobic004G014600 Sobic004G014600 Sobic001G218500--Sobic004G014600 Sobic001G218500--Sobic003G079100 Sobic001G342000 Sobic001G342000 Sobic001G218500--Sobic001G342000 Sobic002G111900 Sobic002G111900 Sobic001G218500--Sobic002G111900 Sobic009G165100 Sobic009G165100 Sobic001G218500--Sobic009G165100 Sobic001G218500--Sobic002G029600 Sobic003G017601 Sobic003G017601 Sobic001G218500--Sobic003G017601 Sobic003G441601 Sobic003G441601 Sobic001G218500--Sobic003G441601 Sobic001G239200--Sobic005G219600 Sobic001G239200--Sobic006G135300 Sobic001G239200--Sobic001G274400 Sobic001G239200--Sobic004G014600 Sobic003G215300 Sobic003G215300 Sobic001G239200--Sobic003G215300 Sobic001G239200--Sobic001G067800 Sobic007G073000 Sobic007G073000 Sobic001G239200--Sobic007G073000 Sobic006G266800 Sobic006G266800 Sobic001G239200--Sobic006G266800 Sobic009G259800 Sobic009G259800 Sobic001G239200--Sobic009G259800 Sobic003G020500--Sobic001G218500 Sobic003G020500--Sobic002G111900 Sobic003G020500--Sobic003G079100 Sobic002G391300 Sobic002G391300 Sobic003G020500--Sobic002G391300 Sobic003G020500--Sobic003G441601 Sobic003G020500--Sobic004G014600 Sobic002G289500 Sobic002G289500 Sobic003G020500--Sobic002G289500 Sobic006G171100 Sobic006G171100 Sobic003G020500--Sobic006G171100 Sobic002G029500 Sobic002G029500 Sobic003G020500--Sobic002G029500 Sobic009G106500 Sobic009G106500 Sobic003G255600--Sobic009G106500 Sobic003G255600--Sobic001G342000 Sobic001G293100 Sobic001G293100 Sobic003G255600--Sobic001G293100 Sobic005G182900 Sobic005G182900 Sobic003G255600--Sobic005G182900 Sobic006G097900 Sobic006G097900 Sobic003G255600--Sobic006G097900 Sobic003G255600--Sobic004G014600 Sobic003G255600--Sobic006G171100 Sobic003G255600--Sobic002G029500 Sobic008G033100 Sobic008G033100 Sobic003G255600--Sobic008G033100 Sobic001G274400--Sobic004G014600 Sobic001G274400--Sobic009G165100 Sobic010G152500 Sobic010G152500 Sobic001G274400--Sobic010G152500 Sobic001G274400--Sobic004G322000 Sobic003G382200 Sobic003G382200 Sobic001G274400--Sobic003G382200 Sobic007G090600 Sobic007G090600 Sobic001G274400--Sobic007G090600 Sobic001G274400--Sobic002G029600 Sobic006G031100 Sobic006G031100 Sobic001G274400--Sobic006G031100 Sobic001G274400--Sobic006G135300 Sobic006G092700 Sobic006G092700 Sobic006G135300--Sobic006G092700 Sobic010G082000 Sobic010G082000 Sobic006G135300--Sobic010G082000 Sobic006G135300--Sobic007G073000 Sobic010G028100 Sobic010G028100 Sobic006G135300--Sobic010G028100 Sobic006G019700 Sobic006G019700 Sobic006G135300--Sobic006G019700 Sobic010G152400 Sobic010G152400 Sobic006G135300--Sobic010G152400 Sobic003G322100 Sobic003G322100 Sobic006G135300--Sobic003G322100 Sobic004G306900 Sobic004G306900 Sobic006G135300--Sobic004G306900 Sobic002G146000 Sobic002G146000 Sobic006G135300--Sobic002G146000 Sobic003G000100 Sobic003G000100 Sobic004G271800--Sobic003G000100 Sobic003G240400 Sobic003G240400 Sobic004G271800--Sobic003G240400 Sobic004G271800--Sobic010G152400 Sobic004G322100 Sobic004G322100 Sobic004G271800--Sobic004G322100 Sobic004G271800--Sobic006G019700 Sobic004G271800--Sobic006G092700 Sobic004G271800--Sobic003G215300 Sobic008G035800 Sobic008G035800 Sobic004G271800--Sobic008G035800 Sobic004G106100 Sobic004G106100 Sobic004G271800--Sobic004G106100 Sobic004G322000--Sobic007G090600 Sobic004G322000--Sobic003G215300 Sobic004G322000--Sobic006G031100 Sobic003G140200 Sobic003G140200 Sobic004G322000--Sobic003G140200 Sobic003G282300 Sobic003G282300 Sobic004G322000--Sobic003G282300 Sobic004G322000--Sobic003G240400 Sobic004G322000--Sobic008G035800 Sobic004G322000--Sobic010G082000 Sobic004G322000--Sobic004G014600
Octagon: transcription factors


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