Gene annotation
Transcriptome id Sobic.008G133000.1
Synonym Sb08g018510
Functional annotation expressed protein
UniProt C5YPW4
Pfam -
Panther DB PTHR34658 PTHR34658:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G07795 : -
RAP-DB (Rice) LOC_Os12g37900.1 : expressed protein
MaizeGDB (Corn) Zm00025a004198
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
2 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.004G248500 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.005G115300 expressed protein -
5 Sobic.001G131001 - -
6 Sobic.001G506600 exostosin family domain containing protein, expressed -
7 Sobic.006G117500 polygalacturonase inhibitor 1 precursor, putative, expressed -
8 Sobic.001G348800 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
9 Sobic.001G002800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
10 Sobic.005G219700 Leucine Rich Repeat family protein, expressed -
11 Sobic.003G287200 WRKY23, expressed -
12 Sobic.010G096700 leaf senescence related protein, putative, expressed -
13 Sobic.001G238500 similar to Putative uncharacterized protein(PubMedID : 29862293)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
14 Sobic.001G514700 "Cytochrome P450, family 78,"("PubMedID : 26759170,PubMedID : 24597475")@cytochrome P450, putative, expressed -
15 Sobic.005G107500 peptide transporter PTR2, putative, expressed -
16 Sobic.002G019100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
17 Sobic.002G163200 - -
18 Sobic.005G022500 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
19 Sobic.009G122300 white-brown complex homolog protein 16, putative, expressed -
20 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -


Gene co-expression network
sample Sobic008G133000 Sobic008G133000 Sobic001G503000 Sobic001G503000 Sobic008G133000--Sobic001G503000 Sobic005G104200 Sobic005G104200 Sobic008G133000--Sobic005G104200 Sobic004G248500 Sobic004G248500 Sobic008G133000--Sobic004G248500 Sobic005G115300 Sobic005G115300 Sobic008G133000--Sobic005G115300 Sobic001G131001 Sobic001G131001 Sobic008G133000--Sobic001G131001 Sobic001G506600 Sobic001G506600 Sobic008G133000--Sobic001G506600 Sobic006G117500 Sobic006G117500 Sobic008G133000--Sobic006G117500 Sobic001G348800 Sobic001G348800 Sobic008G133000--Sobic001G348800 Sobic001G002800 Sobic001G002800 Sobic008G133000--Sobic001G002800 Sobic001G503000--Sobic001G506600 Sobic010G096700 Sobic010G096700 Sobic001G503000--Sobic010G096700 Sobic001G503000--Sobic005G115300 Sobic003G215300 Sobic003G215300 Sobic001G503000--Sobic003G215300 Sobic001G503000--Sobic005G104200 Sobic006G209000 Sobic006G209000 Sobic001G503000--Sobic006G209000 Sobic008G138900 Sobic008G138900 Sobic001G503000--Sobic008G138900 Sobic010G082000 Sobic010G082000 Sobic001G503000--Sobic010G082000 Sobic004G322000 Sobic004G322000 Sobic001G503000--Sobic004G322000 Sobic001G238500 Sobic001G238500 Sobic005G104200--Sobic001G238500 Sobic005G104200--Sobic001G506600 Sobic002G019100 Sobic002G019100 Sobic005G104200--Sobic002G019100 Sobic005G104200--Sobic001G503000 Sobic005G104200--Sobic006G117500 Sobic004G126500 Sobic004G126500 Sobic005G104200--Sobic004G126500 Sobic006G009700 Sobic006G009700 Sobic005G104200--Sobic006G009700 Sobic002G411000 Sobic002G411000 Sobic005G104200--Sobic002G411000 Sobic005G104200--Sobic001G348800 Sobic004G248500--Sobic005G115300 Sobic004G248500--Sobic001G503000 Sobic001G464300 Sobic001G464300 Sobic004G248500--Sobic001G464300 Sobic007G109600 Sobic007G109600 Sobic004G248500--Sobic007G109600 Sobic004G312200 Sobic004G312200 Sobic004G248500--Sobic004G312200 Sobic004G248500--Sobic001G348800 Sobic006G183900 Sobic006G183900 Sobic004G248500--Sobic006G183900 Sobic004G248500--Sobic005G104200 Sobic001G263300 Sobic001G263300 Sobic004G248500--Sobic001G263300 Sobic005G115300--Sobic001G503000 Sobic005G115300--Sobic004G312200 Sobic005G115300--Sobic004G248500 Sobic005G115300--Sobic005G104200 Sobic005G115300--Sobic001G506600 Sobic006G229100 Sobic006G229100 Sobic005G115300--Sobic006G229100 Sobic005G115300--Sobic001G348800 Sobic005G115300--Sobic010G096700 Sobic005G115300--Sobic010G082000 Sobic004G156250 Sobic004G156250 Sobic001G131001--Sobic004G156250 Sobic001G131001--Sobic005G104200 Sobic001G131001--Sobic001G238500 Sobic001G131001--Sobic001G348800 Sobic001G131001--Sobic008G133000 Sobic001G131001--Sobic004G126500 Sobic001G131001--Sobic001G464300 Sobic001G131001--Sobic005G115300 Sobic001G131001--Sobic006G117500 Sobic001G506600--Sobic010G096700 Sobic001G506600--Sobic001G503000 Sobic001G506600--Sobic005G104200 Sobic002G029600 Sobic002G029600 Sobic001G506600--Sobic002G029600 Sobic001G506600--Sobic002G411000 Sobic001G506600--Sobic002G019100 Sobic001G506600--Sobic004G322000 Sobic001G506600--Sobic006G209000 Sobic001G506600--Sobic003G215300 Sobic006G117500--Sobic005G104200 Sobic010G274400 Sobic010G274400 Sobic006G117500--Sobic010G274400 Sobic004G108800 Sobic004G108800 Sobic006G117500--Sobic004G108800 Sobic006G117500--Sobic001G506600 Sobic009G015166 Sobic009G015166 Sobic006G117500--Sobic009G015166 Sobic005G066300 Sobic005G066300 Sobic006G117500--Sobic005G066300 Sobic006G117500--Sobic010G096700 Sobic006G205500 Sobic006G205500 Sobic006G117500--Sobic006G205500 Sobic002G163200 Sobic002G163200 Sobic006G117500--Sobic002G163200 Sobic001G348800--Sobic005G104200 Sobic001G348800--Sobic005G115300 Sobic001G348800--Sobic001G238500 Sobic001G348800--Sobic004G126500 Sobic002G238700 Sobic002G238700 Sobic001G348800--Sobic002G238700 Sobic001G348800--Sobic001G503000 Sobic001G348800--Sobic004G248500 Sobic001G348800--Sobic002G019100 Sobic001G348800--Sobic006G009700 Sobic002G254900 Sobic002G254900 Sobic001G002800--Sobic002G254900 Sobic001G002800--Sobic001G503000 Sobic007G090472 Sobic007G090472 Sobic001G002800--Sobic007G090472 Sobic003G287200 Sobic003G287200 Sobic001G002800--Sobic003G287200 Sobic005G107500 Sobic005G107500 Sobic001G002800--Sobic005G107500 Sobic001G002800--Sobic006G209000 Sobic001G002800--Sobic010G096700 Sobic007G073000 Sobic007G073000 Sobic001G002800--Sobic007G073000 Sobic001G002800--Sobic001G506600
Octagon: transcription factors


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