Gene annotation
Transcriptome id Sobic.004G034200.5,Sobic.004G034200.3,Sobic.004G034200.4,Sobic.004G034200.1
Synonym Sb04g002950, SRF1
Functional annotation STRUBBELIG-RECEPTOR FAMILY 1 precursor, putative, expressed
UniProt A0A1Z5RKQ3 , A0A194YMG7 , A0A1Z5RKR5 , A0A1Z5RL88
Pfam PF08263 PF13855 PF07714 PF08263 PF07714 PF08263 PF07714 PF13855
Panther DB PTHR27001 PTHR27001:SF58
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0005515protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0004672protein kinase activity GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT4G03390 : STRUBBELIG-receptor family 3
RAP-DB (Rice) LOC_Os02g04430.1 : STRUBBELIG-RECEPTOR FAMILY 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a018910
Brachypodium KQJ93218
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G089200 gibberellin receptor GID1L2, putative, expressed -
2 Sobic.005G149600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -
3 Sobic.001G026300 sex determination protein tasselseed-2, putative, expressed -
4 Sobic.004G108800 cytochrome P450, putative, expressed -
5 Sobic.007G156800 "SGL1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659907)@expressed protein -
6 Sobic.003G015200 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
7 Sobic.008G091557 - -
8 Sobic.001G131001 - -
9 Sobic.007G038600 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
10 Sobic.008G108950 - -
11 Sobic.008G133000 expressed protein -
12 Sobic.005G064900 cytochrome P450, putative, expressed -
13 Sobic.005G107500 peptide transporter PTR2, putative, expressed -
14 Sobic.010G170300 Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed K01188: beta-glucosidase
15 Sobic.006G117500 polygalacturonase inhibitor 1 precursor, putative, expressed -
16 Sobic.004G156250 - -
17 Sobic.005G152500 - -
18 Sobic.007G038500 aquaporin protein, putative, expressed K09874: aquaporin NIP
19 Sobic.009G015500 - -
20 Sobic.004G126700 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase


Gene co-expression network
sample Sobic004G034200 Sobic004G034200 Sobic005G089200 Sobic005G089200 Sobic004G034200--Sobic005G089200 Sobic005G149600 Sobic005G149600 Sobic004G034200--Sobic005G149600 Sobic001G026300 Sobic001G026300 Sobic004G034200--Sobic001G026300 Sobic004G108800 Sobic004G108800 Sobic004G034200--Sobic004G108800 Sobic007G156800 Sobic007G156800 Sobic004G034200--Sobic007G156800 Sobic003G015200 Sobic003G015200 Sobic004G034200--Sobic003G015200 Sobic008G091557 Sobic008G091557 Sobic004G034200--Sobic008G091557 Sobic001G131001 Sobic001G131001 Sobic004G034200--Sobic001G131001 Sobic007G038600 Sobic007G038600 Sobic004G034200--Sobic007G038600 Sobic005G089200--Sobic005G149600 Sobic005G089200--Sobic004G108800 Sobic005G089200--Sobic001G026300 Sobic005G152500 Sobic005G152500 Sobic005G089200--Sobic005G152500 Sobic005G089200--Sobic003G015200 Sobic006G117500 Sobic006G117500 Sobic005G089200--Sobic006G117500 Sobic010G170300 Sobic010G170300 Sobic005G089200--Sobic010G170300 Sobic005G089200--Sobic007G156800 Sobic005G089200--Sobic004G034200 Sobic005G149600--Sobic005G089200 Sobic005G149600--Sobic004G108800 Sobic005G149600--Sobic001G026300 Sobic005G149600--Sobic003G015200 Sobic005G149600--Sobic006G117500 Sobic004G156250 Sobic004G156250 Sobic005G149600--Sobic004G156250 Sobic005G149600--Sobic005G152500 Sobic005G149600--Sobic007G156800 Sobic005G149600--Sobic004G034200 Sobic001G026300--Sobic005G149600 Sobic001G026300--Sobic005G089200 Sobic001G026300--Sobic003G015200 Sobic001G026300--Sobic004G034200 Sobic001G026300--Sobic004G108800 Sobic001G026300--Sobic007G156800 Sobic001G026300--Sobic010G170300 Sobic004G126700 Sobic004G126700 Sobic001G026300--Sobic004G126700 Sobic001G464300 Sobic001G464300 Sobic001G026300--Sobic001G464300 Sobic004G108800--Sobic005G149600 Sobic004G108800--Sobic005G089200 Sobic004G108800--Sobic007G156800 Sobic004G108800--Sobic006G117500 Sobic004G108800--Sobic004G156250 Sobic004G108800--Sobic003G015200 Sobic009G015166 Sobic009G015166 Sobic004G108800--Sobic009G015166 Sobic004G108800--Sobic005G152500 Sobic007G038500 Sobic007G038500 Sobic004G108800--Sobic007G038500 Sobic007G156800--Sobic004G108800 Sobic005G064900 Sobic005G064900 Sobic007G156800--Sobic005G064900 Sobic007G156800--Sobic003G015200 Sobic008G108950 Sobic008G108950 Sobic007G156800--Sobic008G108950 Sobic005G088700 Sobic005G088700 Sobic007G156800--Sobic005G088700 Sobic007G156800--Sobic007G038500 Sobic007G156800--Sobic005G089200 Sobic007G156800--Sobic005G149600 Sobic009G015500 Sobic009G015500 Sobic007G156800--Sobic009G015500 Sobic007G058600 Sobic007G058600 Sobic003G015200--Sobic007G058600 Sobic003G015200--Sobic004G108800 Sobic003G015200--Sobic005G064900 Sobic003G015200--Sobic009G015500 Sobic003G015200--Sobic005G149600 Sobic003G015200--Sobic007G156800 Sobic003G015200--Sobic005G152500 Sobic003G015200--Sobic005G089200 Sobic009G006500 Sobic009G006500 Sobic003G015200--Sobic009G006500 Sobic008G091557--Sobic004G034200 Sobic008G091557--Sobic007G038600 Sobic008G133000 Sobic008G133000 Sobic008G091557--Sobic008G133000 Sobic009G221900 Sobic009G221900 Sobic008G091557--Sobic009G221900 Sobic008G091557--Sobic001G131001 Sobic005G107500 Sobic005G107500 Sobic008G091557--Sobic005G107500 Sobic008G072600 Sobic008G072600 Sobic008G091557--Sobic008G072600 Sobic009G125300 Sobic009G125300 Sobic008G091557--Sobic009G125300 Sobic001G263900 Sobic001G263900 Sobic008G091557--Sobic001G263900 Sobic001G131001--Sobic004G156250 Sobic005G104200 Sobic005G104200 Sobic001G131001--Sobic005G104200 Sobic001G238500 Sobic001G238500 Sobic001G131001--Sobic001G238500 Sobic001G348800 Sobic001G348800 Sobic001G131001--Sobic001G348800 Sobic001G131001--Sobic008G133000 Sobic004G126500 Sobic004G126500 Sobic001G131001--Sobic004G126500 Sobic001G131001--Sobic001G464300 Sobic005G115300 Sobic005G115300 Sobic001G131001--Sobic005G115300 Sobic001G131001--Sobic006G117500 Sobic007G038600--Sobic004G034200 Sobic007G038600--Sobic008G091557 Sobic007G038600--Sobic001G131001 Sobic007G106500 Sobic007G106500 Sobic007G038600--Sobic007G106500 Sobic007G038600--Sobic004G108800 Sobic007G038600--Sobic004G156250 Sobic007G038600--Sobic007G038500 Sobic007G038600--Sobic006G117500 Sobic007G038600--Sobic009G015166
Octagon: transcription factors


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