Gene annotation
Transcriptome id Sobic.007G038600.1
Synonym Sb07g003280, MDAR6
Functional annotation monodehydroascorbate reductase, putative, expressed
UniProt A0A1B6PFE9
Pfam PF00070
Panther DB PTHR22912 PTHR22912:SF97
NCBI CDD KOG1336; Monodehydroascorbate/ferredoxin reductase
KEGG Orthology K08232; monodehydroascorbate reductase (NADH)
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G63940 : monodehydroascorbate reductase 6
RAP-DB (Rice) LOC_Os08g05570.3 : monodehydroascorbate reductase, putative, expressed
MaizeGDB (Corn) Zm00025a055226
Brachypodium KQJ95422 , KQJ95423
Barley HORVU7Hr1G072240.8 , HORVU7Hr1G072240.9 , HORVU7Hr1G072240.6 , HORVU7Hr1G072240.7 , HORVU7Hr1G072240.4 , HORVU7Hr1G072240.5 , HORVU7Hr1G072240.2 , HORVU7Hr1G072240.3 , HORVU7Hr1G072240.10 , HORVU7Hr1G072240.11
Wheat TraesCS7D02G299500 , TraesCS7D02G299500 , TraesCS3A02G176700 , TraesCS7A02G304000 , TraesCS7B02G204400
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.007G038600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G034200 STRUBBELIG-RECEPTOR FAMILY 1 precursor, putative, expressed -
2 Sobic.008G091557 - -
3 Sobic.001G131001 - -
4 Sobic.007G106500 "C3 PTPC, unknown so far"(PubMedID : 2308851)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
5 Sobic.004G108800 cytochrome P450, putative, expressed -
6 Sobic.004G156250 - -
7 Sobic.007G038500 aquaporin protein, putative, expressed K09874: aquaporin NIP
8 Sobic.006G117500 polygalacturonase inhibitor 1 precursor, putative, expressed -
9 Sobic.009G015166 - -
10 Sobic.008G133000 expressed protein -
11 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.005G089200 gibberellin receptor GID1L2, putative, expressed -
13 Sobic.005G149600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -
14 Sobic.001G238500 similar to Putative uncharacterized protein(PubMedID : 29862293)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
15 Sobic.005G107500 peptide transporter PTR2, putative, expressed -
16 Sobic.007G156800 "SGL1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659907)@expressed protein -
17 Sobic.004G126500 - -
18 Sobic.010G274400 reticuline oxidase-like protein precursor, putative, expressed -
19 Sobic.007G172500 zinc finger family protein, putative, expressed -
20 Sobic.008G108950 - -


Gene co-expression network
sample Sobic007G038600 Sobic007G038600 Sobic004G034200 Sobic004G034200 Sobic007G038600--Sobic004G034200 Sobic008G091557 Sobic008G091557 Sobic007G038600--Sobic008G091557 Sobic001G131001 Sobic001G131001 Sobic007G038600--Sobic001G131001 Sobic007G106500 Sobic007G106500 Sobic007G038600--Sobic007G106500 Sobic004G108800 Sobic004G108800 Sobic007G038600--Sobic004G108800 Sobic004G156250 Sobic004G156250 Sobic007G038600--Sobic004G156250 Sobic007G038500 Sobic007G038500 Sobic007G038600--Sobic007G038500 Sobic006G117500 Sobic006G117500 Sobic007G038600--Sobic006G117500 Sobic009G015166 Sobic009G015166 Sobic007G038600--Sobic009G015166 Sobic005G089200 Sobic005G089200 Sobic004G034200--Sobic005G089200 Sobic005G149600 Sobic005G149600 Sobic004G034200--Sobic005G149600 Sobic001G026300 Sobic001G026300 Sobic004G034200--Sobic001G026300 Sobic004G034200--Sobic004G108800 Sobic007G156800 Sobic007G156800 Sobic004G034200--Sobic007G156800 Sobic003G015200 Sobic003G015200 Sobic004G034200--Sobic003G015200 Sobic004G034200--Sobic008G091557 Sobic004G034200--Sobic001G131001 Sobic004G034200--Sobic007G038600 Sobic008G091557--Sobic004G034200 Sobic008G091557--Sobic007G038600 Sobic008G133000 Sobic008G133000 Sobic008G091557--Sobic008G133000 Sobic009G221900 Sobic009G221900 Sobic008G091557--Sobic009G221900 Sobic008G091557--Sobic001G131001 Sobic005G107500 Sobic005G107500 Sobic008G091557--Sobic005G107500 Sobic008G072600 Sobic008G072600 Sobic008G091557--Sobic008G072600 Sobic009G125300 Sobic009G125300 Sobic008G091557--Sobic009G125300 Sobic001G263900 Sobic001G263900 Sobic008G091557--Sobic001G263900 Sobic001G131001--Sobic004G156250 Sobic005G104200 Sobic005G104200 Sobic001G131001--Sobic005G104200 Sobic001G238500 Sobic001G238500 Sobic001G131001--Sobic001G238500 Sobic001G348800 Sobic001G348800 Sobic001G131001--Sobic001G348800 Sobic001G131001--Sobic008G133000 Sobic004G126500 Sobic004G126500 Sobic001G131001--Sobic004G126500 Sobic001G464300 Sobic001G464300 Sobic001G131001--Sobic001G464300 Sobic005G115300 Sobic005G115300 Sobic001G131001--Sobic005G115300 Sobic001G131001--Sobic006G117500 Sobic007G106500--Sobic007G038600 Sobic001G173700 Sobic001G173700 Sobic007G106500--Sobic001G173700 Sobic007G106500--Sobic001G238500 Sobic007G106500--Sobic004G126500 Sobic007G106500--Sobic001G131001 Sobic007G106500--Sobic005G104200 Sobic007G172500 Sobic007G172500 Sobic007G106500--Sobic007G172500 Sobic007G020700 Sobic007G020700 Sobic007G106500--Sobic007G020700 Sobic007G106500--Sobic001G464300 Sobic004G108800--Sobic005G149600 Sobic004G108800--Sobic005G089200 Sobic004G108800--Sobic007G156800 Sobic004G108800--Sobic006G117500 Sobic004G108800--Sobic004G156250 Sobic004G108800--Sobic003G015200 Sobic004G108800--Sobic009G015166 Sobic005G152500 Sobic005G152500 Sobic004G108800--Sobic005G152500 Sobic004G108800--Sobic007G038500 Sobic004G156250--Sobic004G108800 Sobic004G156250--Sobic005G104200 Sobic004G156250--Sobic001G238500 Sobic004G156250--Sobic005G149600 Sobic004G156250--Sobic001G131001 Sobic004G156250--Sobic004G126500 Sobic004G156250--Sobic009G015166 Sobic004G156250--Sobic006G117500 Sobic004G156250--Sobic005G089200 Sobic007G038500--Sobic004G108800 Sobic007G038500--Sobic007G156800 Sobic007G038500--Sobic009G015166 Sobic008G108950 Sobic008G108950 Sobic007G038500--Sobic008G108950 Sobic005G064900 Sobic005G064900 Sobic007G038500--Sobic005G064900 Sobic007G038500--Sobic004G156250 Sobic007G038500--Sobic005G149600 Sobic007G038500--Sobic005G089200 Sobic007G038500--Sobic003G015200 Sobic006G117500--Sobic005G104200 Sobic010G274400 Sobic010G274400 Sobic006G117500--Sobic010G274400 Sobic006G117500--Sobic004G108800 Sobic001G506600 Sobic001G506600 Sobic006G117500--Sobic001G506600 Sobic006G117500--Sobic009G015166 Sobic005G066300 Sobic005G066300 Sobic006G117500--Sobic005G066300 Sobic010G096700 Sobic010G096700 Sobic006G117500--Sobic010G096700 Sobic006G205500 Sobic006G205500 Sobic006G117500--Sobic006G205500 Sobic002G163200 Sobic002G163200 Sobic006G117500--Sobic002G163200 Sobic009G015166--Sobic001G238500 Sobic009G015166--Sobic006G117500 Sobic009G015166--Sobic005G066300 Sobic009G015166--Sobic004G108800 Sobic009G015166--Sobic005G104200 Sobic009G015166--Sobic004G126500 Sobic002G411000 Sobic002G411000 Sobic009G015166--Sobic002G411000 Sobic009G015166--Sobic004G156250 Sobic006G009700 Sobic006G009700 Sobic009G015166--Sobic006G009700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.