Gene annotation
Transcriptome id Sobic.007G106500.2,Sobic.007G106500.1
Synonym PEPC1, -, ATPPC1, Sb07g014960, PPC1, ATPEPC1, phosphoenolpyruvate carboxylase 4 (SbPPC4)
Functional annotation "C3 PTPC, unknown so far" (PubMedID : 2308851)
phosphoenolpyruvate carboxylase, putative, expressed
UniProt A0A1Z5RA41 , C5YK81
Pfam PF00311
Panther DB PTHR30523 PTHR30523:SF8
NCBI CDD -
KEGG Orthology K01595; phosphoenolpyruvate carboxylase
Gene Ontology GO:0015977; carbon fixation GO:0008964phosphoenolpyruvate carboxylase activity GO:0006099tricarboxylic acid cycle


Orthologs (automatic annotation)
TAIR AT1G53310 : phosphoenolpyruvate carboxylase 1
RAP-DB (Rice) LOC_Os08g27840.1 : phosphoenolpyruvate carboxylase, putative, expressed
MaizeGDB (Corn) Zm00025a019988 , Zm00025a046442 , Zm00025a034476 , Zm00025a039995
Brachypodium KQJ94205 , KQK18155 , KQJ89819 , KQK18156
Barley HORVU5Hr1G055350.5 , HORVU5Hr1G055350.4 , HORVU5Hr1G055350.7 , HORVU5Hr1G055350.6 , HORVU5Hr1G055350.1 , HORVU5Hr1G055350.3 , HORVU5Hr1G055350.2 , HORVU5Hr1G055350.9 , HORVU5Hr1G055350.8 , HORVU3Hr1G073020.1 , HORVU3Hr1G073020.3 , HORVU3Hr1G073020.2 , HORVU3Hr1G073020.5 , HORVU3Hr1G073020.4 , HORVU3Hr1G073020.6 , HORVU6Hr1G048410.3 , HORVU6Hr1G048410.2 , HORVU6Hr1G048410.1 , HORVU6Hr1G048410.7 , HORVU6Hr1G048410.6 , HORVU6Hr1G048410.5 , HORVU6Hr1G048410.4 , HORVU6Hr1G048410.9 , HORVU6Hr1G048410.8 , HORVU6Hr1G048410.12 , HORVU6Hr1G048410.11 , HORVU6Hr1G048410.10 , HORVU6Hr1G048410.14 , HORVU7Hr1G080510.12 , HORVU7Hr1G080510.11 , HORVU7Hr1G080510.10 , HORVU7Hr1G080510.9 , HORVU7Hr1G080510.8 , HORVU5Hr1G055350.11 , HORVU5Hr1G055350.10 , HORVU7Hr1G080510.3 , HORVU7Hr1G080510.2 , HORVU7Hr1G080510.1 , HORVU7Hr1G080510.7 , HORVU7Hr1G080510.6 , HORVU7Hr1G080510.5 , HORVU7Hr1G080510.4
Wheat TraesCS3D02G295200 , TraesCS3B02G329800 , TraesCS7D02G333900 , TraesCS6A02G195600 , TraesCS7A02G345400 , TraesCS3A02G306700 , TraesCS6D02G183200 , TraesCS6B02G223100 , TraesCS6D02G183200 , TraesCS5A02G181800 , TraesCS7B02G237900 , TraesCS5D02G186200
Populus PNT59122 , PNT59121 , PNT59120 , PNT12858 , PNT12859 , PNT12856 , PNT12857 , PNT12854 , PNT12855 , PNT59119


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G038600 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
2 Sobic.001G173700 universal stress protein domain containing protein, putative, expressed -
3 Sobic.001G238500 similar to Putative uncharacterized protein(PubMedID : 29862293)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
4 Sobic.004G126500 - -
5 Sobic.001G131001 - -
6 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.007G172500 zinc finger family protein, putative, expressed -
8 Sobic.007G020700 ACT domain containing protein, expressed -
9 Sobic.001G464300 helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.008G133000 expressed protein -
11 Sobic.004G156250 - -
12 Sobic.001G348800 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
13 Sobic.006G009700 expressed protein -
14 Sobic.004G094000 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
15 Sobic.005G115300 expressed protein -
16 Sobic.005G022500 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
17 Sobic.002G383900 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
18 Sobic.001G506600 exostosin family domain containing protein, expressed -
19 Sobic.002G019100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
20 Sobic.003G287450 - -


Gene co-expression network
sample Sobic007G106500 Sobic007G106500 Sobic007G038600 Sobic007G038600 Sobic007G106500--Sobic007G038600 Sobic001G173700 Sobic001G173700 Sobic007G106500--Sobic001G173700 Sobic001G238500 Sobic001G238500 Sobic007G106500--Sobic001G238500 Sobic004G126500 Sobic004G126500 Sobic007G106500--Sobic004G126500 Sobic001G131001 Sobic001G131001 Sobic007G106500--Sobic001G131001 Sobic005G104200 Sobic005G104200 Sobic007G106500--Sobic005G104200 Sobic007G172500 Sobic007G172500 Sobic007G106500--Sobic007G172500 Sobic007G020700 Sobic007G020700 Sobic007G106500--Sobic007G020700 Sobic001G464300 Sobic001G464300 Sobic007G106500--Sobic001G464300 Sobic004G034200 Sobic004G034200 Sobic007G038600--Sobic004G034200 Sobic008G091557 Sobic008G091557 Sobic007G038600--Sobic008G091557 Sobic007G038600--Sobic001G131001 Sobic007G038600--Sobic007G106500 Sobic004G108800 Sobic004G108800 Sobic007G038600--Sobic004G108800 Sobic004G156250 Sobic004G156250 Sobic007G038600--Sobic004G156250 Sobic007G038500 Sobic007G038500 Sobic007G038600--Sobic007G038500 Sobic006G117500 Sobic006G117500 Sobic007G038600--Sobic006G117500 Sobic009G015166 Sobic009G015166 Sobic007G038600--Sobic009G015166 Sobic001G173700--Sobic001G464300 Sobic001G173700--Sobic004G126500 Sobic001G173700--Sobic005G104200 Sobic007G041600 Sobic007G041600 Sobic001G173700--Sobic007G041600 Sobic004G248500 Sobic004G248500 Sobic001G173700--Sobic004G248500 Sobic001G348800 Sobic001G348800 Sobic001G173700--Sobic001G348800 Sobic002G019100 Sobic002G019100 Sobic001G173700--Sobic002G019100 Sobic001G173700--Sobic001G238500 Sobic005G115300 Sobic005G115300 Sobic001G173700--Sobic005G115300 Sobic001G238500--Sobic004G126500 Sobic001G238500--Sobic005G104200 Sobic006G009700 Sobic006G009700 Sobic001G238500--Sobic006G009700 Sobic002G238700 Sobic002G238700 Sobic001G238500--Sobic002G238700 Sobic001G238500--Sobic002G019100 Sobic001G238500--Sobic001G348800 Sobic002G411000 Sobic002G411000 Sobic001G238500--Sobic002G411000 Sobic001G238500--Sobic009G015166 Sobic001G506700 Sobic001G506700 Sobic001G238500--Sobic001G506700 Sobic004G126500--Sobic001G238500 Sobic004G126500--Sobic006G009700 Sobic004G126500--Sobic005G104200 Sobic004G126500--Sobic002G238700 Sobic004G126500--Sobic002G019100 Sobic004G126500--Sobic001G348800 Sobic008G084900 Sobic008G084900 Sobic004G126500--Sobic008G084900 Sobic004G312500 Sobic004G312500 Sobic004G126500--Sobic004G312500 Sobic004G126500--Sobic009G015166 Sobic001G131001--Sobic004G156250 Sobic001G131001--Sobic005G104200 Sobic001G131001--Sobic001G238500 Sobic001G131001--Sobic001G348800 Sobic008G133000 Sobic008G133000 Sobic001G131001--Sobic008G133000 Sobic001G131001--Sobic004G126500 Sobic001G131001--Sobic001G464300 Sobic001G131001--Sobic005G115300 Sobic001G131001--Sobic006G117500 Sobic005G104200--Sobic001G238500 Sobic001G506600 Sobic001G506600 Sobic005G104200--Sobic001G506600 Sobic005G104200--Sobic002G019100 Sobic001G503000 Sobic001G503000 Sobic005G104200--Sobic001G503000 Sobic005G104200--Sobic006G117500 Sobic005G104200--Sobic004G126500 Sobic005G104200--Sobic006G009700 Sobic005G104200--Sobic002G411000 Sobic005G104200--Sobic001G348800 Sobic007G172500--Sobic001G238500 Sobic007G172500--Sobic004G126500 Sobic007G172500--Sobic006G009700 Sobic007G172500--Sobic004G312500 Sobic007G172500--Sobic005G104200 Sobic006G108300 Sobic006G108300 Sobic007G172500--Sobic006G108300 Sobic007G172500--Sobic007G020700 Sobic005G022500 Sobic005G022500 Sobic007G172500--Sobic005G022500 Sobic007G172500--Sobic002G411000 Sobic002G029600 Sobic002G029600 Sobic007G020700--Sobic002G029600 Sobic005G071900 Sobic005G071900 Sobic007G020700--Sobic005G071900 Sobic007G020700--Sobic006G009700 Sobic007G020700--Sobic004G312500 Sobic009G060700 Sobic009G060700 Sobic007G020700--Sobic009G060700 Sobic007G020700--Sobic002G019100 Sobic007G020700--Sobic006G108300 Sobic009G079900 Sobic009G079900 Sobic007G020700--Sobic009G079900 Sobic003G079100 Sobic003G079100 Sobic007G020700--Sobic003G079100 Sobic001G212451 Sobic001G212451 Sobic001G464300--Sobic001G212451 Sobic002G391200 Sobic002G391200 Sobic001G464300--Sobic002G391200 Sobic001G464300--Sobic004G248500 Sobic001G464300--Sobic001G173700 Sobic010G021700 Sobic010G021700 Sobic001G464300--Sobic010G021700 Sobic002G082700 Sobic002G082700 Sobic001G464300--Sobic002G082700 Sobic001G464300--Sobic005G104200 Sobic001G464300--Sobic001G348800 Sobic001G301400 Sobic001G301400 Sobic001G464300--Sobic001G301400
Octagon: transcription factors


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