Gene annotation
Transcriptome id Sobic.004G094000.1
Synonym ATCKX6, CKX5, Sb04g007740, ATCKX5
Functional annotation cytokinin dehydrogenase precursor, putative, expressed
UniProt C5XY41
Pfam PF01565 PF09265
Panther DB PTHR13878 PTHR13878:SF55
NCBI CDD KOG1231; Proteins containing the FAD binding domain
KEGG Orthology K00279; cytokinin dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0009690cytokinin metabolic process


Orthologs (automatic annotation)
TAIR AT1G75450 : cytokinin oxidase 5
RAP-DB (Rice) LOC_Os02g12780.1 : cytokinin dehydrogenase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a034558 , Zm00025a034559
Brachypodium KQJ94054 , KQK17898 , PNT66185
Barley -
Wheat TraesCS7B02G455000 , TraesCSU02G106300 , TraesCS6D02G172900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G126500 - -
2 Sobic.007G106500 "C3 PTPC, unknown so far"(PubMedID : 2308851)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
3 Sobic.001G238500 similar to Putative uncharacterized protein(PubMedID : 29862293)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
4 Sobic.007G020700 ACT domain containing protein, expressed -
5 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.004G156250 - -
7 Sobic.002G082700 DUF567 domain containing protein, putative, expressed -
8 Sobic.006G009700 expressed protein -
9 Sobic.010G115000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@limonoid UDP-glucosyltransferase, putative, expressed -
10 Sobic.001G464300 helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.002G071600 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
12 Sobic.002G238700 - -
13 Sobic.001G173700 universal stress protein domain containing protein, putative, expressed -
14 Sobic.002G019100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
15 Sobic.001G348800 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
16 Sobic.003G269900 OsSub12 - Putative Subtilisin homologue, expressed -
17 Sobic.005G012600 LTPL10 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.009G015166 - -
19 Sobic.010G256400 glycosyltransferase protein, putative, expressed -
20 Sobic.007G094100 OsWAK108 - OsWAK receptor-like protein kinase, expressed -


Gene co-expression network
sample Sobic004G094000 Sobic004G094000 Sobic004G126500 Sobic004G126500 Sobic004G094000--Sobic004G126500 Sobic007G106500 Sobic007G106500 Sobic004G094000--Sobic007G106500 Sobic001G238500 Sobic001G238500 Sobic004G094000--Sobic001G238500 Sobic007G020700 Sobic007G020700 Sobic004G094000--Sobic007G020700 Sobic005G104200 Sobic005G104200 Sobic004G094000--Sobic005G104200 Sobic004G156250 Sobic004G156250 Sobic004G094000--Sobic004G156250 Sobic002G082700 Sobic002G082700 Sobic004G094000--Sobic002G082700 Sobic006G009700 Sobic006G009700 Sobic004G094000--Sobic006G009700 Sobic010G115000 Sobic010G115000 Sobic004G094000--Sobic010G115000 Sobic004G126500--Sobic001G238500 Sobic004G126500--Sobic006G009700 Sobic004G126500--Sobic005G104200 Sobic002G238700 Sobic002G238700 Sobic004G126500--Sobic002G238700 Sobic002G019100 Sobic002G019100 Sobic004G126500--Sobic002G019100 Sobic001G348800 Sobic001G348800 Sobic004G126500--Sobic001G348800 Sobic008G084900 Sobic008G084900 Sobic004G126500--Sobic008G084900 Sobic004G312500 Sobic004G312500 Sobic004G126500--Sobic004G312500 Sobic009G015166 Sobic009G015166 Sobic004G126500--Sobic009G015166 Sobic007G038600 Sobic007G038600 Sobic007G106500--Sobic007G038600 Sobic001G173700 Sobic001G173700 Sobic007G106500--Sobic001G173700 Sobic007G106500--Sobic001G238500 Sobic007G106500--Sobic004G126500 Sobic001G131001 Sobic001G131001 Sobic007G106500--Sobic001G131001 Sobic007G106500--Sobic005G104200 Sobic007G172500 Sobic007G172500 Sobic007G106500--Sobic007G172500 Sobic007G106500--Sobic007G020700 Sobic001G464300 Sobic001G464300 Sobic007G106500--Sobic001G464300 Sobic001G238500--Sobic004G126500 Sobic001G238500--Sobic005G104200 Sobic001G238500--Sobic006G009700 Sobic001G238500--Sobic002G238700 Sobic001G238500--Sobic002G019100 Sobic001G238500--Sobic001G348800 Sobic002G411000 Sobic002G411000 Sobic001G238500--Sobic002G411000 Sobic001G238500--Sobic009G015166 Sobic001G506700 Sobic001G506700 Sobic001G238500--Sobic001G506700 Sobic002G029600 Sobic002G029600 Sobic007G020700--Sobic002G029600 Sobic005G071900 Sobic005G071900 Sobic007G020700--Sobic005G071900 Sobic007G020700--Sobic006G009700 Sobic007G020700--Sobic004G312500 Sobic009G060700 Sobic009G060700 Sobic007G020700--Sobic009G060700 Sobic007G020700--Sobic002G019100 Sobic006G108300 Sobic006G108300 Sobic007G020700--Sobic006G108300 Sobic009G079900 Sobic009G079900 Sobic007G020700--Sobic009G079900 Sobic003G079100 Sobic003G079100 Sobic007G020700--Sobic003G079100 Sobic005G104200--Sobic001G238500 Sobic001G506600 Sobic001G506600 Sobic005G104200--Sobic001G506600 Sobic005G104200--Sobic002G019100 Sobic001G503000 Sobic001G503000 Sobic005G104200--Sobic001G503000 Sobic006G117500 Sobic006G117500 Sobic005G104200--Sobic006G117500 Sobic005G104200--Sobic004G126500 Sobic005G104200--Sobic006G009700 Sobic005G104200--Sobic002G411000 Sobic005G104200--Sobic001G348800 Sobic004G108800 Sobic004G108800 Sobic004G156250--Sobic004G108800 Sobic004G156250--Sobic005G104200 Sobic004G156250--Sobic001G238500 Sobic005G149600 Sobic005G149600 Sobic004G156250--Sobic005G149600 Sobic004G156250--Sobic001G131001 Sobic004G156250--Sobic004G126500 Sobic004G156250--Sobic009G015166 Sobic004G156250--Sobic006G117500 Sobic005G089200 Sobic005G089200 Sobic004G156250--Sobic005G089200 Sobic006G212350 Sobic006G212350 Sobic002G082700--Sobic006G212350 Sobic002G391200 Sobic002G391200 Sobic002G082700--Sobic002G391200 Sobic009G096300 Sobic009G096300 Sobic002G082700--Sobic009G096300 Sobic002G082700--Sobic001G464300 Sobic010G021700 Sobic010G021700 Sobic002G082700--Sobic010G021700 Sobic002G082700--Sobic010G115000 Sobic010G174100 Sobic010G174100 Sobic002G082700--Sobic010G174100 Sobic001G301400 Sobic001G301400 Sobic002G082700--Sobic001G301400 Sobic001G212451 Sobic001G212451 Sobic002G082700--Sobic001G212451 Sobic008G138700 Sobic008G138700 Sobic006G009700--Sobic008G138700 Sobic006G009700--Sobic004G312500 Sobic006G009700--Sobic005G071900 Sobic006G009700--Sobic002G019100 Sobic006G009700--Sobic004G126500 Sobic006G009700--Sobic001G238500 Sobic005G066500 Sobic005G066500 Sobic006G009700--Sobic005G066500 Sobic006G009700--Sobic002G238700 Sobic006G009700--Sobic006G108300 Sobic007G094100 Sobic007G094100 Sobic010G115000--Sobic007G094100 Sobic003G269900 Sobic003G269900 Sobic010G115000--Sobic003G269900 Sobic005G216500 Sobic005G216500 Sobic010G115000--Sobic005G216500 Sobic003G046700 Sobic003G046700 Sobic010G115000--Sobic003G046700 Sobic004G008600 Sobic004G008600 Sobic010G115000--Sobic004G008600 Sobic006G171300 Sobic006G171300 Sobic010G115000--Sobic006G171300 Sobic010G139100 Sobic010G139100 Sobic010G115000--Sobic010G139100 Sobic010G269000 Sobic010G269000 Sobic010G115000--Sobic010G269000 Sobic010G115000--Sobic008G084900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.