Gene annotation
Transcriptome id Sobic.001G464300.1
Synonym Sb01g043570
Functional annotation helix-loop-helix DNA-binding domain containing protein, expressed
UniProt A0A1B6QPS0
Pfam PF00010
Panther DB PTHR16223 PTHR16223:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G14760 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os03g10770.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a053136
Brachypodium KQK23035
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G212451 - -
2 Sobic.002G391200 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.004G248500 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.001G173700 universal stress protein domain containing protein, putative, expressed -
5 Sobic.010G021700 eukaryotic aspartyl protease domain containing protein, expressed -
6 Sobic.002G082700 DUF567 domain containing protein, putative, expressed -
7 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G348800 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
9 Sobic.001G301400 expansin precursor, putative, expressed -
10 Sobic.002G307900 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.004G156250 - -
12 Sobic.005G115300 expressed protein -
13 Sobic.007G087600 homeobox domain containing protein, expressed -
14 Sobic.001G026300 sex determination protein tasselseed-2, putative, expressed -
15 Sobic.001G131001 - -
16 Sobic.005G097600 gibberellin 20 oxidase 2, putative, expressed -
17 Sobic.005G036900 RCLEA6 - Root cap and Late embryogenesis related family protein precursor, expressed -
18 Sobic.004G126500 - -
19 Sobic.003G269900 OsSub12 - Putative Subtilisin homologue, expressed -
20 Sobic.007G109600 expressed protein -


Gene co-expression network
sample Sobic001G464300 Sobic001G464300 Sobic001G212451 Sobic001G212451 Sobic001G464300--Sobic001G212451 Sobic002G391200 Sobic002G391200 Sobic001G464300--Sobic002G391200 Sobic004G248500 Sobic004G248500 Sobic001G464300--Sobic004G248500 Sobic001G173700 Sobic001G173700 Sobic001G464300--Sobic001G173700 Sobic010G021700 Sobic010G021700 Sobic001G464300--Sobic010G021700 Sobic002G082700 Sobic002G082700 Sobic001G464300--Sobic002G082700 Sobic005G104200 Sobic005G104200 Sobic001G464300--Sobic005G104200 Sobic001G348800 Sobic001G348800 Sobic001G464300--Sobic001G348800 Sobic001G301400 Sobic001G301400 Sobic001G464300--Sobic001G301400 Sobic001G212451--Sobic001G464300 Sobic001G212451--Sobic004G248500 Sobic001G212451--Sobic002G391200 Sobic001G212451--Sobic010G021700 Sobic005G097600 Sobic005G097600 Sobic001G212451--Sobic005G097600 Sobic007G109600 Sobic007G109600 Sobic001G212451--Sobic007G109600 Sobic002G307900 Sobic002G307900 Sobic001G212451--Sobic002G307900 Sobic005G036900 Sobic005G036900 Sobic001G212451--Sobic005G036900 Sobic001G212451--Sobic001G301400 Sobic002G391200--Sobic010G021700 Sobic002G391200--Sobic001G301400 Sobic002G391200--Sobic002G307900 Sobic009G096300 Sobic009G096300 Sobic002G391200--Sobic009G096300 Sobic002G391200--Sobic001G464300 Sobic010G174100 Sobic010G174100 Sobic002G391200--Sobic010G174100 Sobic002G391200--Sobic002G082700 Sobic010G115000 Sobic010G115000 Sobic002G391200--Sobic010G115000 Sobic010G139100 Sobic010G139100 Sobic002G391200--Sobic010G139100 Sobic005G115300 Sobic005G115300 Sobic004G248500--Sobic005G115300 Sobic001G503000 Sobic001G503000 Sobic004G248500--Sobic001G503000 Sobic004G248500--Sobic001G464300 Sobic004G248500--Sobic007G109600 Sobic004G312200 Sobic004G312200 Sobic004G248500--Sobic004G312200 Sobic004G248500--Sobic001G348800 Sobic006G183900 Sobic006G183900 Sobic004G248500--Sobic006G183900 Sobic004G248500--Sobic005G104200 Sobic001G263300 Sobic001G263300 Sobic004G248500--Sobic001G263300 Sobic001G173700--Sobic001G464300 Sobic004G126500 Sobic004G126500 Sobic001G173700--Sobic004G126500 Sobic001G173700--Sobic005G104200 Sobic007G041600 Sobic007G041600 Sobic001G173700--Sobic007G041600 Sobic001G173700--Sobic004G248500 Sobic001G173700--Sobic001G348800 Sobic002G019100 Sobic002G019100 Sobic001G173700--Sobic002G019100 Sobic001G238500 Sobic001G238500 Sobic001G173700--Sobic001G238500 Sobic001G173700--Sobic005G115300 Sobic010G021700--Sobic001G301400 Sobic010G021700--Sobic002G307900 Sobic010G021700--Sobic002G391200 Sobic010G021700--Sobic009G096300 Sobic010G021700--Sobic010G174100 Sobic010G021700--Sobic010G139100 Sobic001G314100 Sobic001G314100 Sobic010G021700--Sobic001G314100 Sobic001G308600 Sobic001G308600 Sobic010G021700--Sobic001G308600 Sobic004G323000 Sobic004G323000 Sobic010G021700--Sobic004G323000 Sobic006G212350 Sobic006G212350 Sobic002G082700--Sobic006G212350 Sobic002G082700--Sobic002G391200 Sobic002G082700--Sobic009G096300 Sobic002G082700--Sobic001G464300 Sobic002G082700--Sobic010G021700 Sobic002G082700--Sobic010G115000 Sobic002G082700--Sobic010G174100 Sobic002G082700--Sobic001G301400 Sobic002G082700--Sobic001G212451 Sobic005G104200--Sobic001G238500 Sobic001G506600 Sobic001G506600 Sobic005G104200--Sobic001G506600 Sobic005G104200--Sobic002G019100 Sobic005G104200--Sobic001G503000 Sobic006G117500 Sobic006G117500 Sobic005G104200--Sobic006G117500 Sobic005G104200--Sobic004G126500 Sobic006G009700 Sobic006G009700 Sobic005G104200--Sobic006G009700 Sobic002G411000 Sobic002G411000 Sobic005G104200--Sobic002G411000 Sobic005G104200--Sobic001G348800 Sobic001G348800--Sobic005G104200 Sobic001G348800--Sobic005G115300 Sobic001G348800--Sobic001G238500 Sobic001G348800--Sobic004G126500 Sobic002G238700 Sobic002G238700 Sobic001G348800--Sobic002G238700 Sobic001G348800--Sobic001G503000 Sobic001G348800--Sobic004G248500 Sobic001G348800--Sobic002G019100 Sobic001G348800--Sobic006G009700 Sobic001G301400--Sobic010G021700 Sobic001G301400--Sobic002G307900 Sobic001G301400--Sobic002G391200 Sobic001G301400--Sobic001G314100 Sobic001G301400--Sobic009G096300 Sobic001G301400--Sobic010G174100 Sobic001G301400--Sobic004G323000 Sobic001G301400--Sobic010G139100 Sobic001G301400--Sobic001G308600
Octagon: transcription factors


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