Gene annotation
Transcriptome id Sobic.002G071600.2,Sobic.002G071600.1
Synonym ethylene response factor 17, Sb02g006023, RAP2.11, SbERF17
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt A0A1B6Q9T2 , A0A1W0W2M8
Pfam PF00847
Panther DB PTHR31194 PTHR31194:SF0 PTHR31194:SF0 PTHR31194
NCBI CDD -
KEGG Orthology K09286; EREBP-like factor
Gene Ontology GO:0003700; DNA-binding transcription factor activity GO:0006355regulation of transcription, DNA-templated GO:0006355regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G19790 : related to AP2 11
RAP-DB (Rice) LOC_Os07g10410.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a043851 , Zm00025a045338
Brachypodium KQK18045 , KQK15572
Barley HORVU6Hr1G090800.1 , HORVU6Hr1G090800.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G115000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@limonoid UDP-glucosyltransferase, putative, expressed -
2 Sobic.007G094100 OsWAK108 - OsWAK receptor-like protein kinase, expressed -
3 Sobic.004G126500 - -
4 Sobic.007G149000 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@cytochrome P450, putative, expressed -
5 Sobic.002G082700 DUF567 domain containing protein, putative, expressed -
6 Sobic.003G269900 OsSub12 - Putative Subtilisin homologue, expressed -
7 Sobic.006G171300 expansin precursor, putative, expressed -
8 Sobic.002G391200 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.002G019100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
10 Sobic.001G173700 universal stress protein domain containing protein, putative, expressed -
11 Sobic.010G256400 glycosyltransferase protein, putative, expressed -
12 Sobic.001G238500 similar to Putative uncharacterized protein(PubMedID : 29862293)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
13 Sobic.009G096300 ATOFP17/OFP17, putative, expressed -
14 Sobic.010G174100 expressed protein -
15 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -
16 Sobic.008G084900 D-mannose binding lectin family protein, expressed -
17 Sobic.001G464300 helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.006G009700 expressed protein -
19 Sobic.002G238700 - -
20 Sobic.002G118900 auxin-induced protein 5NG4, putative, expressed -


Gene co-expression network
sample Sobic002G071600 Sobic002G071600 Sobic010G115000 Sobic010G115000 Sobic002G071600--Sobic010G115000 Sobic007G094100 Sobic007G094100 Sobic002G071600--Sobic007G094100 Sobic004G126500 Sobic004G126500 Sobic002G071600--Sobic004G126500 Sobic007G149000 Sobic007G149000 Sobic002G071600--Sobic007G149000 Sobic002G082700 Sobic002G082700 Sobic002G071600--Sobic002G082700 Sobic003G269900 Sobic003G269900 Sobic002G071600--Sobic003G269900 Sobic006G171300 Sobic006G171300 Sobic002G071600--Sobic006G171300 Sobic002G391200 Sobic002G391200 Sobic002G071600--Sobic002G391200 Sobic002G019100 Sobic002G019100 Sobic002G071600--Sobic002G019100 Sobic010G115000--Sobic007G094100 Sobic010G115000--Sobic003G269900 Sobic005G216500 Sobic005G216500 Sobic010G115000--Sobic005G216500 Sobic003G046700 Sobic003G046700 Sobic010G115000--Sobic003G046700 Sobic004G008600 Sobic004G008600 Sobic010G115000--Sobic004G008600 Sobic010G115000--Sobic006G171300 Sobic010G139100 Sobic010G139100 Sobic010G115000--Sobic010G139100 Sobic010G269000 Sobic010G269000 Sobic010G115000--Sobic010G269000 Sobic008G084900 Sobic008G084900 Sobic010G115000--Sobic008G084900 Sobic007G094100--Sobic010G115000 Sobic007G094100--Sobic005G216500 Sobic007G094100--Sobic004G008600 Sobic007G094100--Sobic010G269000 Sobic004G009300 Sobic004G009300 Sobic007G094100--Sobic004G009300 Sobic007G094100--Sobic003G046700 Sobic007G094100--Sobic006G171300 Sobic009G018300 Sobic009G018300 Sobic007G094100--Sobic009G018300 Sobic005G120900 Sobic005G120900 Sobic007G094100--Sobic005G120900 Sobic001G238500 Sobic001G238500 Sobic004G126500--Sobic001G238500 Sobic006G009700 Sobic006G009700 Sobic004G126500--Sobic006G009700 Sobic005G104200 Sobic005G104200 Sobic004G126500--Sobic005G104200 Sobic002G238700 Sobic002G238700 Sobic004G126500--Sobic002G238700 Sobic004G126500--Sobic002G019100 Sobic001G348800 Sobic001G348800 Sobic004G126500--Sobic001G348800 Sobic004G126500--Sobic008G084900 Sobic004G312500 Sobic004G312500 Sobic004G126500--Sobic004G312500 Sobic009G015166 Sobic009G015166 Sobic004G126500--Sobic009G015166 Sobic005G049350 Sobic005G049350 Sobic007G149000--Sobic005G049350 Sobic007G149000--Sobic007G094100 Sobic001G521600 Sobic001G521600 Sobic007G149000--Sobic001G521600 Sobic007G149000--Sobic006G171300 Sobic003G176300 Sobic003G176300 Sobic007G149000--Sobic003G176300 Sobic004G337950 Sobic004G337950 Sobic007G149000--Sobic004G337950 Sobic005G012600 Sobic005G012600 Sobic007G149000--Sobic005G012600 Sobic009G098000 Sobic009G098000 Sobic007G149000--Sobic009G098000 Sobic007G149000--Sobic010G115000 Sobic006G212350 Sobic006G212350 Sobic002G082700--Sobic006G212350 Sobic002G082700--Sobic002G391200 Sobic009G096300 Sobic009G096300 Sobic002G082700--Sobic009G096300 Sobic001G464300 Sobic001G464300 Sobic002G082700--Sobic001G464300 Sobic010G021700 Sobic010G021700 Sobic002G082700--Sobic010G021700 Sobic002G082700--Sobic010G115000 Sobic010G174100 Sobic010G174100 Sobic002G082700--Sobic010G174100 Sobic001G301400 Sobic001G301400 Sobic002G082700--Sobic001G301400 Sobic001G212451 Sobic001G212451 Sobic002G082700--Sobic001G212451 Sobic002G118900 Sobic002G118900 Sobic003G269900--Sobic002G118900 Sobic003G269900--Sobic010G115000 Sobic003G269900--Sobic010G139100 Sobic009G032900 Sobic009G032900 Sobic003G269900--Sobic009G032900 Sobic003G269900--Sobic005G216500 Sobic002G115600 Sobic002G115600 Sobic003G269900--Sobic002G115600 Sobic010G158400 Sobic010G158400 Sobic003G269900--Sobic010G158400 Sobic005G216700 Sobic005G216700 Sobic003G269900--Sobic005G216700 Sobic003G185300 Sobic003G185300 Sobic003G269900--Sobic003G185300 Sobic006G171300--Sobic007G094100 Sobic006G171300--Sobic010G174100 Sobic006G171300--Sobic010G115000 Sobic006G171300--Sobic009G096300 Sobic006G171300--Sobic004G009300 Sobic006G171300--Sobic003G269900 Sobic006G171300--Sobic010G139100 Sobic002G392300 Sobic002G392300 Sobic006G171300--Sobic002G392300 Sobic006G171300--Sobic002G391200 Sobic002G391200--Sobic010G021700 Sobic002G391200--Sobic001G301400 Sobic002G307900 Sobic002G307900 Sobic002G391200--Sobic002G307900 Sobic002G391200--Sobic009G096300 Sobic002G391200--Sobic001G464300 Sobic002G391200--Sobic010G174100 Sobic002G391200--Sobic002G082700 Sobic002G391200--Sobic010G115000 Sobic002G391200--Sobic010G139100 Sobic002G019100--Sobic006G009700 Sobic002G019100--Sobic005G104200 Sobic009G060700 Sobic009G060700 Sobic002G019100--Sobic009G060700 Sobic006G108300 Sobic006G108300 Sobic002G019100--Sobic006G108300 Sobic008G138700 Sobic008G138700 Sobic002G019100--Sobic008G138700 Sobic002G019100--Sobic008G084900 Sobic001G506600 Sobic001G506600 Sobic002G019100--Sobic001G506600 Sobic001G506700 Sobic001G506700 Sobic002G019100--Sobic001G506700 Sobic002G029600 Sobic002G029600 Sobic002G019100--Sobic002G029600
Octagon: transcription factors


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