Gene annotation
Transcriptome id Sobic.005G012600.1
Synonym LTP1, ATLTP1, LP1
Functional annotation LTPL10 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5Y3G2
Pfam PF00234
Panther DB PTHR33076 PTHR33076:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38540 : lipid transfer protein 1
RAP-DB (Rice) LOC_Os11g24070.1 : LTPL10 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a053814 , Zm00025a029018
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G149000 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@cytochrome P450, putative, expressed -
2 Sobic.002G076700 IPP transferase, putative, expressed K10760: adenylate dimethylallyltransferase (cytokinin synthase)
3 Sobic.001G521600 Leucine-rich repeat family protein("PubMedID : 26759170,PubMedID : 24597475")@leucine-rich repeat family protein, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
4 Sobic.006G092100 no apical meristem protein, putative, expressed -
5 Sobic.004G337950 - -
6 Sobic.007G094100 OsWAK108 - OsWAK receptor-like protein kinase, expressed -
7 Sobic.008G138700 MLA12, putative, expressed -
8 Sobic.009G018300 vrga1, putative, expressed -
9 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
10 Sobic.009G060700 receptor-like protein kinase 2 precursor, putative, expressed -
11 Sobic.010G152300 glycosyltransferase, putative, expressed -
12 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
13 Sobic.003G046700 expressed protein -
14 Sobic.009G084400 transporter family protein, putative, expressed -
15 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
16 Sobic.008G084900 D-mannose binding lectin family protein, expressed -
17 Sobic.002G197000 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase
18 Sobic.005G226400 RGH1A, putative, expressed -
19 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -
20 Sobic.002G118900 auxin-induced protein 5NG4, putative, expressed -


Gene co-expression network
sample Sobic005G012600 Sobic005G012600 Sobic007G149000 Sobic007G149000 Sobic005G012600--Sobic007G149000 Sobic002G076700 Sobic002G076700 Sobic005G012600--Sobic002G076700 Sobic001G521600 Sobic001G521600 Sobic005G012600--Sobic001G521600 Sobic006G092100 Sobic006G092100 Sobic005G012600--Sobic006G092100 Sobic004G337950 Sobic004G337950 Sobic005G012600--Sobic004G337950 Sobic007G094100 Sobic007G094100 Sobic005G012600--Sobic007G094100 Sobic008G138700 Sobic008G138700 Sobic005G012600--Sobic008G138700 Sobic009G018300 Sobic009G018300 Sobic005G012600--Sobic009G018300 Sobic004G008600 Sobic004G008600 Sobic005G012600--Sobic004G008600 Sobic005G049350 Sobic005G049350 Sobic007G149000--Sobic005G049350 Sobic007G149000--Sobic007G094100 Sobic007G149000--Sobic001G521600 Sobic006G171300 Sobic006G171300 Sobic007G149000--Sobic006G171300 Sobic003G176300 Sobic003G176300 Sobic007G149000--Sobic003G176300 Sobic007G149000--Sobic004G337950 Sobic007G149000--Sobic005G012600 Sobic009G098000 Sobic009G098000 Sobic007G149000--Sobic009G098000 Sobic010G115000 Sobic010G115000 Sobic007G149000--Sobic010G115000 Sobic010G152300 Sobic010G152300 Sobic002G076700--Sobic010G152300 Sobic009G060700 Sobic009G060700 Sobic002G076700--Sobic009G060700 Sobic005G222600 Sobic005G222600 Sobic002G076700--Sobic005G222600 Sobic009G058400 Sobic009G058400 Sobic002G076700--Sobic009G058400 Sobic002G076700--Sobic006G092100 Sobic001G232000 Sobic001G232000 Sobic002G076700--Sobic001G232000 Sobic003G001300 Sobic003G001300 Sobic002G076700--Sobic003G001300 Sobic005G134200 Sobic005G134200 Sobic002G076700--Sobic005G134200 Sobic002G076700--Sobic001G521600 Sobic001G521600--Sobic009G018300 Sobic001G521600--Sobic004G337950 Sobic003G046700 Sobic003G046700 Sobic001G521600--Sobic003G046700 Sobic010G128300 Sobic010G128300 Sobic001G521600--Sobic010G128300 Sobic001G506100 Sobic001G506100 Sobic001G521600--Sobic001G506100 Sobic004G119900 Sobic004G119900 Sobic001G521600--Sobic004G119900 Sobic007G097550 Sobic007G097550 Sobic001G521600--Sobic007G097550 Sobic001G233100 Sobic001G233100 Sobic001G521600--Sobic001G233100 Sobic001G521600--Sobic005G134200 Sobic010G213600 Sobic010G213600 Sobic006G092100--Sobic010G213600 Sobic006G092100--Sobic010G152300 Sobic001G293100 Sobic001G293100 Sobic006G092100--Sobic001G293100 Sobic008G033100 Sobic008G033100 Sobic006G092100--Sobic008G033100 Sobic006G092100--Sobic008G138700 Sobic005G097900 Sobic005G097900 Sobic006G092100--Sobic005G097900 Sobic005G182900 Sobic005G182900 Sobic006G092100--Sobic005G182900 Sobic002G029500 Sobic002G029500 Sobic006G092100--Sobic002G029500 Sobic002G019000 Sobic002G019000 Sobic006G092100--Sobic002G019000 Sobic004G337950--Sobic009G018300 Sobic004G337950--Sobic001G521600 Sobic004G337950--Sobic007G097550 Sobic004G009300 Sobic004G009300 Sobic004G337950--Sobic004G009300 Sobic004G337950--Sobic001G233100 Sobic004G337950--Sobic007G094100 Sobic004G337950--Sobic001G506100 Sobic004G337950--Sobic003G046700 Sobic009G004900 Sobic009G004900 Sobic004G337950--Sobic009G004900 Sobic007G094100--Sobic010G115000 Sobic005G216500 Sobic005G216500 Sobic007G094100--Sobic005G216500 Sobic007G094100--Sobic004G008600 Sobic010G269000 Sobic010G269000 Sobic007G094100--Sobic010G269000 Sobic007G094100--Sobic004G009300 Sobic007G094100--Sobic003G046700 Sobic007G094100--Sobic006G171300 Sobic007G094100--Sobic009G018300 Sobic005G120900 Sobic005G120900 Sobic007G094100--Sobic005G120900 Sobic006G009700 Sobic006G009700 Sobic008G138700--Sobic006G009700 Sobic008G138700--Sobic009G060700 Sobic005G066500 Sobic005G066500 Sobic008G138700--Sobic005G066500 Sobic005G065700 Sobic005G065700 Sobic008G138700--Sobic005G065700 Sobic005G110511 Sobic005G110511 Sobic008G138700--Sobic005G110511 Sobic005G071900 Sobic005G071900 Sobic008G138700--Sobic005G071900 Sobic004G312500 Sobic004G312500 Sobic008G138700--Sobic004G312500 Sobic008G138700--Sobic006G092100 Sobic008G138700--Sobic010G213600 Sobic009G018300--Sobic007G097550 Sobic009G018300--Sobic001G233100 Sobic009G018300--Sobic001G506100 Sobic009G018300--Sobic009G004900 Sobic009G018300--Sobic003G046700 Sobic009G018300--Sobic001G521600 Sobic009G018300--Sobic004G337950 Sobic009G018300--Sobic004G009300 Sobic009G018300--Sobic010G269000 Sobic004G008600--Sobic010G269000 Sobic004G008600--Sobic005G134200 Sobic004G008600--Sobic005G216500 Sobic004G008600--Sobic003G046700 Sobic005G226350 Sobic005G226350 Sobic004G008600--Sobic005G226350 Sobic004G008600--Sobic005G120900 Sobic007G220400 Sobic007G220400 Sobic004G008600--Sobic007G220400 Sobic005G226400 Sobic005G226400 Sobic004G008600--Sobic005G226400 Sobic010G191700 Sobic010G191700 Sobic004G008600--Sobic010G191700
Octagon: transcription factors


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