Gene annotation
Transcriptome id Sobic.001G373500.3,Sobic.001G373500.1,Sobic.001G373500.2
Synonym Sb01g035480
Functional annotation BTBN6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
UniProt A0A1B6QN88 , A0A1Z5S9K7
Pfam PF03000
Panther DB PTHR32370 PTHR32370:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G03010 : Phototropic-responsive NPH3 family protein
RAP-DB (Rice) LOC_Os03g22600.1 : BTBN6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
MaizeGDB (Corn) Zm00025a052386
Brachypodium KQK21702 , KQK21563 , PNT77351 , PNT77352 , PNT77353
Barley HORVU1Hr1G055870.8 , HORVU1Hr1G055870.1 , HORVU1Hr1G055870.2 , HORVU1Hr1G055870.3 , HORVU1Hr1G055870.4 , HORVU1Hr1G055870.5 , HORVU1Hr1G055870.6 , HORVU1Hr1G055870.7
Wheat TraesCS5D02G463700 , TraesCS5D02G463700 , TraesCS5D02G463700 , TraesCS5B02G461900 , TraesCS5B02G461900 , TraesCS5B02G461900 , TraesCS5B02G461900 , TraesCS7A02G184200 , TraesCS7A02G184200 , TraesCS7A02G184200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G035000 DNA binding protein, putative, expressed -
2 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
3 Sobic.007G015000 methyltransferase domain containing protein, expressed -
4 Sobic.001G415100 terpene synthase, putative, expressed -
5 Sobic.006G171100 expansin precursor, putative, expressed -
6 Sobic.002G029500 cytochrome P450 84A1, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
7 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
8 Sobic.004G299500 - -
9 Sobic.001G293100 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.006G097900 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
11 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
13 Sobic.003G441601 - -
14 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.005G106300 expressed protein -
16 Sobic.001G189500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
17 Sobic.001G342000 expressed protein -
18 Sobic.001G181600 dehydrogenase/reductase, putative, expressed -
19 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -
20 Sobic.007G111800 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -


Gene co-expression network
sample Sobic001G373500 Sobic001G373500 Sobic005G035000 Sobic005G035000 Sobic001G373500--Sobic005G035000 Sobic006G230100 Sobic006G230100 Sobic001G373500--Sobic006G230100 Sobic007G015000 Sobic007G015000 Sobic001G373500--Sobic007G015000 Sobic001G415100 Sobic001G415100 Sobic001G373500--Sobic001G415100 Sobic006G171100 Sobic006G171100 Sobic001G373500--Sobic006G171100 Sobic002G029500 Sobic002G029500 Sobic001G373500--Sobic002G029500 Sobic002G289500 Sobic002G289500 Sobic001G373500--Sobic002G289500 Sobic004G299500 Sobic004G299500 Sobic001G373500--Sobic004G299500 Sobic001G293100 Sobic001G293100 Sobic001G373500--Sobic001G293100 Sobic005G035000--Sobic001G373500 Sobic001G189500 Sobic001G189500 Sobic005G035000--Sobic001G189500 Sobic004G099600 Sobic004G099600 Sobic005G035000--Sobic004G099600 Sobic003G226100 Sobic003G226100 Sobic005G035000--Sobic003G226100 Sobic001G349900 Sobic001G349900 Sobic005G035000--Sobic001G349900 Sobic010G194500 Sobic010G194500 Sobic005G035000--Sobic010G194500 Sobic001G302300 Sobic001G302300 Sobic005G035000--Sobic001G302300 Sobic003G256900 Sobic003G256900 Sobic005G035000--Sobic003G256900 Sobic004G176800 Sobic004G176800 Sobic005G035000--Sobic004G176800 Sobic006G230100--Sobic004G299500 Sobic001G395900 Sobic001G395900 Sobic006G230100--Sobic001G395900 Sobic007G202480 Sobic007G202480 Sobic006G230100--Sobic007G202480 Sobic006G230100--Sobic007G015000 Sobic005G069166 Sobic005G069166 Sobic006G230100--Sobic005G069166 Sobic009G055300 Sobic009G055300 Sobic006G230100--Sobic009G055300 Sobic006G230200 Sobic006G230200 Sobic006G230100--Sobic006G230200 Sobic001G153100 Sobic001G153100 Sobic006G230100--Sobic001G153100 Sobic006G229901 Sobic006G229901 Sobic006G230100--Sobic006G229901 Sobic007G015000--Sobic006G230100 Sobic007G015000--Sobic004G299500 Sobic007G015000--Sobic001G293100 Sobic007G015000--Sobic001G415100 Sobic007G212000 Sobic007G212000 Sobic007G015000--Sobic007G212000 Sobic005G097900 Sobic005G097900 Sobic007G015000--Sobic005G097900 Sobic007G015000--Sobic005G069166 Sobic007G015000--Sobic007G202480 Sobic008G105800 Sobic008G105800 Sobic007G015000--Sobic008G105800 Sobic001G415100--Sobic007G015000 Sobic001G415100--Sobic002G289500 Sobic001G415100--Sobic006G230100 Sobic001G415100--Sobic009G055300 Sobic002G063700 Sobic002G063700 Sobic001G415100--Sobic002G063700 Sobic001G415100--Sobic004G299500 Sobic005G182900 Sobic005G182900 Sobic001G415100--Sobic005G182900 Sobic001G415100--Sobic001G153100 Sobic001G415100--Sobic005G097900 Sobic009G136800 Sobic009G136800 Sobic006G171100--Sobic009G136800 Sobic002G391300 Sobic002G391300 Sobic006G171100--Sobic002G391300 Sobic010G010000 Sobic010G010000 Sobic006G171100--Sobic010G010000 Sobic003G441601 Sobic003G441601 Sobic006G171100--Sobic003G441601 Sobic002G111900 Sobic002G111900 Sobic006G171100--Sobic002G111900 Sobic005G046400 Sobic005G046400 Sobic006G171100--Sobic005G046400 Sobic006G171100--Sobic002G289500 Sobic005G226400 Sobic005G226400 Sobic006G171100--Sobic005G226400 Sobic006G047200 Sobic006G047200 Sobic006G171100--Sobic006G047200 Sobic002G029500--Sobic005G182900 Sobic007G064900 Sobic007G064900 Sobic002G029500--Sobic007G064900 Sobic002G029500--Sobic005G097900 Sobic005G106300 Sobic005G106300 Sobic002G029500--Sobic005G106300 Sobic008G033100 Sobic008G033100 Sobic002G029500--Sobic008G033100 Sobic002G029500--Sobic002G289500 Sobic002G029500--Sobic001G415100 Sobic002G029500--Sobic007G015000 Sobic002G082000 Sobic002G082000 Sobic002G029500--Sobic002G082000 Sobic002G289500--Sobic002G391300 Sobic002G289500--Sobic001G415100 Sobic002G289500--Sobic003G441601 Sobic002G289500--Sobic006G171100 Sobic002G289500--Sobic001G153100 Sobic002G289500--Sobic009G136800 Sobic002G289500--Sobic002G029500 Sobic002G289500--Sobic006G230100 Sobic002G289500--Sobic002G063700 Sobic004G299500--Sobic006G230100 Sobic004G299500--Sobic001G395900 Sobic004G299500--Sobic007G202480 Sobic004G299500--Sobic005G069166 Sobic004G299500--Sobic006G229901 Sobic004G299500--Sobic007G015000 Sobic005G069332 Sobic005G069332 Sobic004G299500--Sobic005G069332 Sobic004G299500--Sobic001G153100 Sobic008G058600 Sobic008G058600 Sobic004G299500--Sobic008G058600 Sobic001G293100--Sobic007G015000 Sobic001G293100--Sobic005G097900 Sobic001G293100--Sobic008G033100 Sobic010G242800 Sobic010G242800 Sobic001G293100--Sobic010G242800 Sobic003G161400 Sobic003G161400 Sobic001G293100--Sobic003G161400 Sobic001G293100--Sobic005G182900 Sobic001G293100--Sobic001G415100 Sobic001G293100--Sobic002G029500 Sobic001G293100--Sobic006G230100
Octagon: transcription factors


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