Gene annotation
Transcriptome id Sobic.001G284900.1
Synonym Sb01g027980
Functional annotation expressed protein
UniProt C5WQP6
Pfam -
Panther DB PTHR28039 PTHR28039:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66230 : Chalcone-flavanone isomerase family protein
RAP-DB (Rice) LOC_Os10g42660.1 : expressed protein
MaizeGDB (Corn) Zm00025a018074 , Zm00025a003529
Brachypodium -
Barley -
Wheat TraesCS1B02G210600 , TraesCS1A02G196000 , TraesCS1B02G210600 , TraesCS1A02G196000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G414400 expressed protein -
2 Sobic.005G056800 FHA domain containing protein, putative, expressed -
3 Sobic.003G047200 expressed protein -
4 Sobic.010G215300 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
5 Sobic.004G271300 DNA topoisomerase 2, putative, expressed K03164: DNA topoisomerase II
6 Sobic.009G025400 myosin heavy chain-related, putative, expressed -
7 Sobic.001G427400 AAA-type ATPase family protein, putative, expressed K11269: CTF18, chromosome transmission fidelity protein 18
8 Sobic.010G017400 DLT(Ortholog in rice:Tong et al. (2012))(PubMedID : 31659927)@DELLA protein SLR1, putative, expressed -
9 Sobic.001G098900 syntaxin-related protein, putative, expressed K08486: syntaxin 1B/2/3
10 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
11 Sobic.001G070200 - -
12 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
13 Sobic.001G140600 expressed protein -
14 Sobic.008G147500 cyclin, putative, expressed K18811: cyclin D5, plant
15 Sobic.001G458900 targeting protein-related, putative, expressed -
16 Sobic.004G198200 expressed protein -
17 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
18 Sobic.010G202100 expressed protein -
19 Sobic.007G168900 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
20 Sobic.006G176400 ATROPGEF7/ROPGEF7, putative, expressed -


Gene co-expression network
sample Sobic001G284900 Sobic001G284900 Sobic003G414400 Sobic003G414400 Sobic001G284900--Sobic003G414400 Sobic005G056800 Sobic005G056800 Sobic001G284900--Sobic005G056800 Sobic003G047200 Sobic003G047200 Sobic001G284900--Sobic003G047200 Sobic010G215300 Sobic010G215300 Sobic001G284900--Sobic010G215300 Sobic004G271300 Sobic004G271300 Sobic001G284900--Sobic004G271300 Sobic009G025400 Sobic009G025400 Sobic001G284900--Sobic009G025400 Sobic001G427400 Sobic001G427400 Sobic001G284900--Sobic001G427400 Sobic010G017400 Sobic010G017400 Sobic001G284900--Sobic010G017400 Sobic001G098900 Sobic001G098900 Sobic001G284900--Sobic001G098900 Sobic003G414400--Sobic001G284900 Sobic003G414400--Sobic010G215300 Sobic003G414400--Sobic001G098900 Sobic010G202100 Sobic010G202100 Sobic003G414400--Sobic010G202100 Sobic003G414400--Sobic003G047200 Sobic010G234800 Sobic010G234800 Sobic003G414400--Sobic010G234800 Sobic006G155900 Sobic006G155900 Sobic003G414400--Sobic006G155900 Sobic001G070200 Sobic001G070200 Sobic003G414400--Sobic001G070200 Sobic003G414400--Sobic004G271300 Sobic005G056800--Sobic001G284900 Sobic005G056800--Sobic009G025400 Sobic005G056800--Sobic004G271300 Sobic005G056800--Sobic003G047200 Sobic005G056800--Sobic003G414400 Sobic005G056800--Sobic010G215300 Sobic006G112800 Sobic006G112800 Sobic005G056800--Sobic006G112800 Sobic001G540900 Sobic001G540900 Sobic005G056800--Sobic001G540900 Sobic007G130000 Sobic007G130000 Sobic005G056800--Sobic007G130000 Sobic003G047200--Sobic010G234800 Sobic003G047200--Sobic001G098900 Sobic003G047200--Sobic010G215300 Sobic001G458900 Sobic001G458900 Sobic003G047200--Sobic001G458900 Sobic003G047200--Sobic001G284900 Sobic003G047200--Sobic003G414400 Sobic003G047200--Sobic006G155900 Sobic003G047200--Sobic010G202100 Sobic002G279300 Sobic002G279300 Sobic003G047200--Sobic002G279300 Sobic010G215300--Sobic001G098900 Sobic010G215300--Sobic010G234800 Sobic010G215300--Sobic003G414400 Sobic010G215300--Sobic010G202100 Sobic001G140600 Sobic001G140600 Sobic010G215300--Sobic001G140600 Sobic010G215300--Sobic003G047200 Sobic008G114500 Sobic008G114500 Sobic010G215300--Sobic008G114500 Sobic010G215300--Sobic001G540900 Sobic010G215300--Sobic001G284900 Sobic007G168900 Sobic007G168900 Sobic004G271300--Sobic007G168900 Sobic005G000500 Sobic005G000500 Sobic004G271300--Sobic005G000500 Sobic003G260700 Sobic003G260700 Sobic004G271300--Sobic003G260700 Sobic001G170800 Sobic001G170800 Sobic004G271300--Sobic001G170800 Sobic005G005700 Sobic005G005700 Sobic004G271300--Sobic005G005700 Sobic001G398400 Sobic001G398400 Sobic004G271300--Sobic001G398400 Sobic008G006800 Sobic008G006800 Sobic004G271300--Sobic008G006800 Sobic001G177900 Sobic001G177900 Sobic004G271300--Sobic001G177900 Sobic005G144600 Sobic005G144600 Sobic004G271300--Sobic005G144600 Sobic009G025400--Sobic005G056800 Sobic009G025400--Sobic010G202100 Sobic004G108400 Sobic004G108400 Sobic009G025400--Sobic004G108400 Sobic002G394200 Sobic002G394200 Sobic009G025400--Sobic002G394200 Sobic009G257900 Sobic009G257900 Sobic009G025400--Sobic009G257900 Sobic009G025400--Sobic006G112800 Sobic009G025400--Sobic003G414400 Sobic009G025400--Sobic001G284900 Sobic003G083500 Sobic003G083500 Sobic009G025400--Sobic003G083500 Sobic008G147500 Sobic008G147500 Sobic001G427400--Sobic008G147500 Sobic001G494300 Sobic001G494300 Sobic001G427400--Sobic001G494300 Sobic001G427400--Sobic003G414400 Sobic001G427400--Sobic007G130000 Sobic004G198200 Sobic004G198200 Sobic001G427400--Sobic004G198200 Sobic001G427400--Sobic001G284900 Sobic001G295400 Sobic001G295400 Sobic001G427400--Sobic001G295400 Sobic001G427400--Sobic006G112800 Sobic010G067900 Sobic010G067900 Sobic001G427400--Sobic010G067900 Sobic010G017400--Sobic008G006800 Sobic010G017400--Sobic005G005700 Sobic002G296000 Sobic002G296000 Sobic010G017400--Sobic002G296000 Sobic010G017400--Sobic001G170800 Sobic010G017400--Sobic001G177900 Sobic010G017400--Sobic001G398400 Sobic010G017400--Sobic004G271300 Sobic010G017400--Sobic007G168900 Sobic010G008900 Sobic010G008900 Sobic010G017400--Sobic010G008900 Sobic001G098900--Sobic010G215300 Sobic001G098900--Sobic010G234800 Sobic001G098900--Sobic010G202100 Sobic001G244400 Sobic001G244400 Sobic001G098900--Sobic001G244400 Sobic001G098900--Sobic003G047200 Sobic001G098900--Sobic003G414400 Sobic002G293800 Sobic002G293800 Sobic001G098900--Sobic002G293800 Sobic001G098900--Sobic008G114500 Sobic001G098900--Sobic006G155900
Octagon: transcription factors


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