Gene annotation
Transcriptome id Sobic.003G229800.1
Synonym Sb03g028790
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
X8 domain containing protein, expressed
UniProt C5XEG3
Pfam PF07983
Panther DB PTHR32227 PTHR32227:SF127
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30933 : Carbohydrate-binding X8 domain superfamily protein
RAP-DB (Rice) LOC_Os01g44090.1 : X8 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a036713 , Zm00025a057007 , Zm00025a028320 , Zm00025a038632
Brachypodium PNT70656 , KQK04688 , KQK08863 , PNT61837
Barley HORVU3Hr1G056800.2 , HORVU3Hr1G056800.3 , HORVU3Hr1G056800.1 , HORVU3Hr1G056800.6 , HORVU3Hr1G056800.7 , HORVU3Hr1G056800.4 , HORVU3Hr1G056800.5 , HORVU3Hr1G056800.8 , HORVU3Hr1G056800.9 , HORVU3Hr1G056800.10 , HORVU3Hr1G056800.11
Wheat TraesCS2A02G425000 , TraesCS3B02G257100 , TraesCS3A02G227300 , TraesCS2B02G444800 , TraesCS2D02G423000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G174200 KH domain containing protein, putative, expressed -
2 Sobic.005G170100 phosphoesterase family protein, putative, expressed K01114: phospholipase C
3 Sobic.003G083600 DNA binding protein, putative, expressed -
4 Sobic.010G234300 - -
5 Sobic.001G203700 formin-like protein 6 precursor, putative, expressed -
6 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -
7 Sobic.004G085700 expressed protein -
8 Sobic.004G232600 expressed protein -
9 Sobic.003G086500 expressed protein -
10 Sobic.001G227850 - -
11 Sobic.005G033000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
12 Sobic.008G135300 thaumatin family domain containing protein, expressed -
13 Sobic.001G467500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.010G097200 expressed protein -
15 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
16 Sobic.001G314000 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.001G443100 Oxidoreductase superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
18 Sobic.004G105100 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.008G062900 H-BTB8 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
20 Sobic.001G514300 Glutathione S-transferase("PubMedID : 26759170,PubMedID : 24597475")@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic003G229800 Sobic003G229800 Sobic006G174200 Sobic006G174200 Sobic003G229800--Sobic006G174200 Sobic005G170100 Sobic005G170100 Sobic003G229800--Sobic005G170100 Sobic003G083600 Sobic003G083600 Sobic003G229800--Sobic003G083600 Sobic010G234300 Sobic010G234300 Sobic003G229800--Sobic010G234300 Sobic001G203700 Sobic001G203700 Sobic003G229800--Sobic001G203700 Sobic001G471800 Sobic001G471800 Sobic003G229800--Sobic001G471800 Sobic004G085700 Sobic004G085700 Sobic003G229800--Sobic004G085700 Sobic004G232600 Sobic004G232600 Sobic003G229800--Sobic004G232600 Sobic003G086500 Sobic003G086500 Sobic003G229800--Sobic003G086500 Sobic001G160600 Sobic001G160600 Sobic006G174200--Sobic001G160600 Sobic006G174200--Sobic003G229800 Sobic007G075351 Sobic007G075351 Sobic006G174200--Sobic007G075351 Sobic009G130200 Sobic009G130200 Sobic006G174200--Sobic009G130200 Sobic006G174200--Sobic001G203700 Sobic002G008200 Sobic002G008200 Sobic006G174200--Sobic002G008200 Sobic005G226000 Sobic005G226000 Sobic006G174200--Sobic005G226000 Sobic001G368900 Sobic001G368900 Sobic006G174200--Sobic001G368900 Sobic002G021132 Sobic002G021132 Sobic006G174200--Sobic002G021132 Sobic006G225500 Sobic006G225500 Sobic005G170100--Sobic006G225500 Sobic001G300500 Sobic001G300500 Sobic005G170100--Sobic001G300500 Sobic002G183700 Sobic002G183700 Sobic005G170100--Sobic002G183700 Sobic005G127400 Sobic005G127400 Sobic005G170100--Sobic005G127400 Sobic010G027300 Sobic010G027300 Sobic005G170100--Sobic010G027300 Sobic004G110700 Sobic004G110700 Sobic005G170100--Sobic004G110700 Sobic003G140700 Sobic003G140700 Sobic005G170100--Sobic003G140700 Sobic001G502000 Sobic001G502000 Sobic005G170100--Sobic001G502000 Sobic007G158800 Sobic007G158800 Sobic005G170100--Sobic007G158800 Sobic005G231300 Sobic005G231300 Sobic003G083600--Sobic005G231300 Sobic001G514300 Sobic001G514300 Sobic003G083600--Sobic001G514300 Sobic009G079900 Sobic009G079900 Sobic003G083600--Sobic009G079900 Sobic008G099100 Sobic008G099100 Sobic003G083600--Sobic008G099100 Sobic002G029600 Sobic002G029600 Sobic003G083600--Sobic002G029600 Sobic001G169400 Sobic001G169400 Sobic003G083600--Sobic001G169400 Sobic003G382200 Sobic003G382200 Sobic003G083600--Sobic003G382200 Sobic001G274400 Sobic001G274400 Sobic003G083600--Sobic001G274400 Sobic008G014700 Sobic008G014700 Sobic003G083600--Sobic008G014700 Sobic001G443100 Sobic001G443100 Sobic010G234300--Sobic001G443100 Sobic010G234300--Sobic001G471800 Sobic003G255600 Sobic003G255600 Sobic010G234300--Sobic003G255600 Sobic008G079800 Sobic008G079800 Sobic010G234300--Sobic008G079800 Sobic005G219700 Sobic005G219700 Sobic010G234300--Sobic005G219700 Sobic009G106500 Sobic009G106500 Sobic010G234300--Sobic009G106500 Sobic003G082700 Sobic003G082700 Sobic010G234300--Sobic003G082700 Sobic002G207000 Sobic002G207000 Sobic010G234300--Sobic002G207000 Sobic007G064900 Sobic007G064900 Sobic010G234300--Sobic007G064900 Sobic010G118300 Sobic010G118300 Sobic001G203700--Sobic010G118300 Sobic001G203700--Sobic003G229800 Sobic002G238500 Sobic002G238500 Sobic001G203700--Sobic002G238500 Sobic002G081700 Sobic002G081700 Sobic001G203700--Sobic002G081700 Sobic007G129000 Sobic007G129000 Sobic001G203700--Sobic007G129000 Sobic002G091000 Sobic002G091000 Sobic001G203700--Sobic002G091000 Sobic001G203700--Sobic005G226000 Sobic001G203700--Sobic003G086500 Sobic003G419400 Sobic003G419400 Sobic001G203700--Sobic003G419400 Sobic002G146000 Sobic002G146000 Sobic001G471800--Sobic002G146000 Sobic004G047600 Sobic004G047600 Sobic001G471800--Sobic004G047600 Sobic006G224500 Sobic006G224500 Sobic001G471800--Sobic006G224500 Sobic004G193500 Sobic004G193500 Sobic001G471800--Sobic004G193500 Sobic003G183300 Sobic003G183300 Sobic001G471800--Sobic003G183300 Sobic001G471800--Sobic003G255600 Sobic001G360700 Sobic001G360700 Sobic001G471800--Sobic001G360700 Sobic006G031100 Sobic006G031100 Sobic001G471800--Sobic006G031100 Sobic010G093300 Sobic010G093300 Sobic001G471800--Sobic010G093300 Sobic004G085700--Sobic010G027300 Sobic001G161000 Sobic001G161000 Sobic004G085700--Sobic001G161000 Sobic006G096600 Sobic006G096600 Sobic004G085700--Sobic006G096600 Sobic004G085700--Sobic005G170100 Sobic002G393600 Sobic002G393600 Sobic004G085700--Sobic002G393600 Sobic005G123500 Sobic005G123500 Sobic004G085700--Sobic005G123500 Sobic004G024100 Sobic004G024100 Sobic004G085700--Sobic004G024100 Sobic005G120500 Sobic005G120500 Sobic004G085700--Sobic005G120500 Sobic009G170800 Sobic009G170800 Sobic004G085700--Sobic009G170800 Sobic009G153500 Sobic009G153500 Sobic004G232600--Sobic009G153500 Sobic003G256900 Sobic003G256900 Sobic004G232600--Sobic003G256900 Sobic004G232600--Sobic005G170100 Sobic004G232600--Sobic010G027300 Sobic004G232600--Sobic003G086500 Sobic003G205600 Sobic003G205600 Sobic004G232600--Sobic003G205600 Sobic008G062900 Sobic008G062900 Sobic004G232600--Sobic008G062900 Sobic004G232600--Sobic003G083600 Sobic001G348800 Sobic001G348800 Sobic004G232600--Sobic001G348800 Sobic003G086500--Sobic004G232600 Sobic005G036300 Sobic005G036300 Sobic003G086500--Sobic005G036300 Sobic006G160000 Sobic006G160000 Sobic003G086500--Sobic006G160000 Sobic006G187200 Sobic006G187200 Sobic003G086500--Sobic006G187200 Sobic003G086500--Sobic001G203700 Sobic002G096900 Sobic002G096900 Sobic003G086500--Sobic002G096900 Sobic003G086500--Sobic003G229800 Sobic003G086500--Sobic005G226000 Sobic001G467500 Sobic001G467500 Sobic003G086500--Sobic001G467500
Octagon: transcription factors


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