Gene annotation
Transcriptome id Sobic.001G467500.1
Synonym Sb01g043850
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6QPW9
Pfam PF14009
Panther DB PTHR33413 PTHR33413:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G67620 : -
RAP-DB (Rice) LOC_Os03g10320.1 : expressed protein
MaizeGDB (Corn) Zm00025a001177 , Zm00025a053155 , Zm00025a021997
Brachypodium KQK23089
Barley HORVU4Hr1G070470.8 , HORVU4Hr1G070470.9 , HORVU4Hr1G070470.4 , HORVU4Hr1G070470.6 , HORVU4Hr1G070470.7
Wheat TraesCS4A02G039700 , TraesCS4B02G260900 , TraesCS4D02G260500
Populus -


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cDNA sequences
Sobic.001G467500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
2 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
3 Sobic.001G002800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
4 Sobic.001G348800 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
5 Sobic.010G096700 leaf senescence related protein, putative, expressed -
6 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
7 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -
8 Sobic.007G073000 - -
9 Sobic.001G506600 exostosin family domain containing protein, expressed -
10 Sobic.010G260600 CAMK_CAMK_like_CG18020d.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
11 Sobic.001G514700 "Cytochrome P450, family 78,"("PubMedID : 26759170,PubMedID : 24597475")@cytochrome P450, putative, expressed -
12 Sobic.007G154100 aspartic proteinase nepenthesin precursor, putative, expressed -
13 Sobic.005G177400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
14 Sobic.008G138900 MLA12, putative, expressed -
15 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
16 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.001G413700 white-brown complex homolog protein, putative, expressed -
18 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
19 Sobic.001G263300 glycosyltransferase, putative, expressed K18207: POMGNT2, protein O-mannose beta-1,4-N-acetylglucosaminyltransferase
20 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase


Gene co-expression network
sample Sobic001G467500 Sobic001G467500 Sobic001G503000 Sobic001G503000 Sobic001G467500--Sobic001G503000 Sobic006G209000 Sobic006G209000 Sobic001G467500--Sobic006G209000 Sobic001G002800 Sobic001G002800 Sobic001G467500--Sobic001G002800 Sobic001G348800 Sobic001G348800 Sobic001G467500--Sobic001G348800 Sobic010G096700 Sobic010G096700 Sobic001G467500--Sobic010G096700 Sobic003G215300 Sobic003G215300 Sobic001G467500--Sobic003G215300 Sobic001G471800 Sobic001G471800 Sobic001G467500--Sobic001G471800 Sobic007G073000 Sobic007G073000 Sobic001G467500--Sobic007G073000 Sobic001G506600 Sobic001G506600 Sobic001G467500--Sobic001G506600 Sobic001G503000--Sobic001G506600 Sobic001G503000--Sobic010G096700 Sobic005G115300 Sobic005G115300 Sobic001G503000--Sobic005G115300 Sobic001G503000--Sobic003G215300 Sobic005G104200 Sobic005G104200 Sobic001G503000--Sobic005G104200 Sobic001G503000--Sobic006G209000 Sobic008G138900 Sobic008G138900 Sobic001G503000--Sobic008G138900 Sobic010G082000 Sobic010G082000 Sobic001G503000--Sobic010G082000 Sobic004G322000 Sobic004G322000 Sobic001G503000--Sobic004G322000 Sobic007G154100 Sobic007G154100 Sobic006G209000--Sobic007G154100 Sobic006G108300 Sobic006G108300 Sobic006G209000--Sobic006G108300 Sobic005G071900 Sobic005G071900 Sobic006G209000--Sobic005G071900 Sobic004G312500 Sobic004G312500 Sobic006G209000--Sobic004G312500 Sobic006G209000--Sobic001G503000 Sobic002G029600 Sobic002G029600 Sobic006G209000--Sobic002G029600 Sobic006G209000--Sobic010G096700 Sobic006G209000--Sobic001G506600 Sobic009G106100 Sobic009G106100 Sobic006G209000--Sobic009G106100 Sobic002G254900 Sobic002G254900 Sobic001G002800--Sobic002G254900 Sobic001G002800--Sobic001G503000 Sobic007G090472 Sobic007G090472 Sobic001G002800--Sobic007G090472 Sobic003G287200 Sobic003G287200 Sobic001G002800--Sobic003G287200 Sobic005G107500 Sobic005G107500 Sobic001G002800--Sobic005G107500 Sobic001G002800--Sobic006G209000 Sobic001G002800--Sobic010G096700 Sobic001G002800--Sobic007G073000 Sobic001G002800--Sobic001G506600 Sobic001G348800--Sobic005G104200 Sobic001G348800--Sobic005G115300 Sobic001G238500 Sobic001G238500 Sobic001G348800--Sobic001G238500 Sobic004G126500 Sobic004G126500 Sobic001G348800--Sobic004G126500 Sobic002G238700 Sobic002G238700 Sobic001G348800--Sobic002G238700 Sobic001G348800--Sobic001G503000 Sobic004G248500 Sobic004G248500 Sobic001G348800--Sobic004G248500 Sobic002G019100 Sobic002G019100 Sobic001G348800--Sobic002G019100 Sobic006G009700 Sobic006G009700 Sobic001G348800--Sobic006G009700 Sobic010G096700--Sobic001G506600 Sobic010G096700--Sobic001G503000 Sobic010G096700--Sobic006G209000 Sobic010G096700--Sobic004G322000 Sobic010G096700--Sobic003G215300 Sobic010G096700--Sobic005G104200 Sobic005G066300 Sobic005G066300 Sobic010G096700--Sobic005G066300 Sobic001G274400 Sobic001G274400 Sobic010G096700--Sobic001G274400 Sobic010G096700--Sobic005G115300 Sobic007G090600 Sobic007G090600 Sobic003G215300--Sobic007G090600 Sobic006G031100 Sobic006G031100 Sobic003G215300--Sobic006G031100 Sobic002G115600 Sobic002G115600 Sobic003G215300--Sobic002G115600 Sobic003G240400 Sobic003G240400 Sobic003G215300--Sobic003G240400 Sobic006G196400 Sobic006G196400 Sobic003G215300--Sobic006G196400 Sobic001G263300 Sobic001G263300 Sobic003G215300--Sobic001G263300 Sobic003G215300--Sobic007G073000 Sobic003G215300--Sobic001G503000 Sobic003G215300--Sobic002G029600 Sobic002G146000 Sobic002G146000 Sobic001G471800--Sobic002G146000 Sobic004G047600 Sobic004G047600 Sobic001G471800--Sobic004G047600 Sobic006G224500 Sobic006G224500 Sobic001G471800--Sobic006G224500 Sobic004G193500 Sobic004G193500 Sobic001G471800--Sobic004G193500 Sobic003G183300 Sobic003G183300 Sobic001G471800--Sobic003G183300 Sobic003G255600 Sobic003G255600 Sobic001G471800--Sobic003G255600 Sobic001G360700 Sobic001G360700 Sobic001G471800--Sobic001G360700 Sobic001G471800--Sobic006G031100 Sobic010G093300 Sobic010G093300 Sobic001G471800--Sobic010G093300 Sobic006G092700 Sobic006G092700 Sobic007G073000--Sobic006G092700 Sobic003G322100 Sobic003G322100 Sobic007G073000--Sobic003G322100 Sobic007G073000--Sobic003G215300 Sobic007G073000--Sobic002G146000 Sobic006G135300 Sobic006G135300 Sobic007G073000--Sobic006G135300 Sobic002G195600 Sobic002G195600 Sobic007G073000--Sobic002G195600 Sobic007G073000--Sobic010G082000 Sobic007G073000--Sobic007G090472 Sobic007G073000--Sobic003G240400 Sobic001G506600--Sobic010G096700 Sobic001G506600--Sobic001G503000 Sobic001G506600--Sobic005G104200 Sobic001G506600--Sobic002G029600 Sobic002G411000 Sobic002G411000 Sobic001G506600--Sobic002G411000 Sobic001G506600--Sobic002G019100 Sobic001G506600--Sobic004G322000 Sobic001G506600--Sobic006G209000 Sobic001G506600--Sobic003G215300
Octagon: transcription factors


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