Gene annotation
Transcriptome id Sobic.001G443100.1
Synonym Sb01g041640
Functional annotation Oxidoreductase superfamily protein( (PubMedID : 26759170,(PubMedID : 24597475)
oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt C5WRM3
Pfam PF00248
Panther DB PTHR11732 PTHR11732:SF237
NCBI CDD KOG1577; Aldo/keto reductase family proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G59960 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os03g13390.2 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a001482
Brachypodium KQK22674
Barley HORVU4Hr1G064720.1 , HORVU4Hr1G064720.2 , HORVU2Hr1G078570.15 , HORVU2Hr1G078570.12 , HORVU2Hr1G078570.11 , HORVU2Hr1G078570.10 , HORVU2Hr1G078570.9 , HORVU2Hr1G078570.8 , HORVU2Hr1G078570.7 , HORVU2Hr1G078570.6 , HORVU2Hr1G078570.5 , HORVU2Hr1G078570.4 , HORVU2Hr1G078570.3 , HORVU2Hr1G078570.2 , HORVU2Hr1G078570.1 , HORVU2Hr1G000050.2
Wheat TraesCS4D02G232200 , TraesCS4A02G074800 , TraesCS2B02G023500
Populus -


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cDNA sequences
Sobic.001G443100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G261500 phosphoribosyl transferase, putative, expressed -
2 Sobic.001G395900 Nicotianamine synthase 4("PubMedID : 26759170,PubMedID : 24597475")@nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
3 Sobic.005G101000 - -
4 Sobic.002G082000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
5 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
6 Sobic.003G154500 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.005G033000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
8 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
9 Sobic.008G058600 protein kinase family protein, putative, expressed -
10 Sobic.004G299500 - -
11 Sobic.007G202480 - -
12 Sobic.001G234100 expressed protein -
13 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.006G059800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
17 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
18 Sobic.006G229901 - -
19 Sobic.008G084800 major facilitator superfamily antiporter, putative, expressed -
20 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic001G443100 Sobic001G443100 Sobic004G261500 Sobic004G261500 Sobic001G443100--Sobic004G261500 Sobic001G395900 Sobic001G395900 Sobic001G443100--Sobic001G395900 Sobic005G101000 Sobic005G101000 Sobic001G443100--Sobic005G101000 Sobic002G082000 Sobic002G082000 Sobic001G443100--Sobic002G082000 Sobic006G230100 Sobic006G230100 Sobic001G443100--Sobic006G230100 Sobic003G154500 Sobic003G154500 Sobic001G443100--Sobic003G154500 Sobic005G033000 Sobic005G033000 Sobic001G443100--Sobic005G033000 Sobic006G230200 Sobic006G230200 Sobic001G443100--Sobic006G230200 Sobic008G058600 Sobic008G058600 Sobic001G443100--Sobic008G058600 Sobic004G261500--Sobic001G395900 Sobic004G261500--Sobic005G101000 Sobic004G261500--Sobic006G230100 Sobic004G299500 Sobic004G299500 Sobic004G261500--Sobic004G299500 Sobic004G261500--Sobic008G058600 Sobic007G202480 Sobic007G202480 Sobic004G261500--Sobic007G202480 Sobic004G261500--Sobic006G230200 Sobic001G153100 Sobic001G153100 Sobic004G261500--Sobic001G153100 Sobic004G261500--Sobic003G154500 Sobic001G395900--Sobic007G202480 Sobic001G395900--Sobic004G299500 Sobic001G395900--Sobic005G101000 Sobic001G395900--Sobic006G230100 Sobic001G395900--Sobic006G230200 Sobic001G395900--Sobic008G058600 Sobic006G229901 Sobic006G229901 Sobic001G395900--Sobic006G229901 Sobic001G395900--Sobic004G261500 Sobic005G069166 Sobic005G069166 Sobic001G395900--Sobic005G069166 Sobic001G234100 Sobic001G234100 Sobic005G101000--Sobic001G234100 Sobic005G101000--Sobic001G395900 Sobic005G101000--Sobic008G058600 Sobic008G084800 Sobic008G084800 Sobic005G101000--Sobic008G084800 Sobic006G047200 Sobic006G047200 Sobic005G101000--Sobic006G047200 Sobic005G212800 Sobic005G212800 Sobic005G101000--Sobic005G212800 Sobic005G205400 Sobic005G205400 Sobic005G101000--Sobic005G205400 Sobic005G101000--Sobic004G299500 Sobic005G101000--Sobic007G202480 Sobic002G029500 Sobic002G029500 Sobic002G082000--Sobic002G029500 Sobic002G391300 Sobic002G391300 Sobic002G082000--Sobic002G391300 Sobic002G111900 Sobic002G111900 Sobic002G082000--Sobic002G111900 Sobic005G134200 Sobic005G134200 Sobic002G082000--Sobic005G134200 Sobic002G082000--Sobic006G047200 Sobic006G059800 Sobic006G059800 Sobic002G082000--Sobic006G059800 Sobic002G289500 Sobic002G289500 Sobic002G082000--Sobic002G289500 Sobic006G171100 Sobic006G171100 Sobic002G082000--Sobic006G171100 Sobic005G035900 Sobic005G035900 Sobic002G082000--Sobic005G035900 Sobic006G230100--Sobic004G299500 Sobic006G230100--Sobic001G395900 Sobic006G230100--Sobic007G202480 Sobic007G015000 Sobic007G015000 Sobic006G230100--Sobic007G015000 Sobic006G230100--Sobic005G069166 Sobic009G055300 Sobic009G055300 Sobic006G230100--Sobic009G055300 Sobic006G230100--Sobic006G230200 Sobic006G230100--Sobic001G153100 Sobic006G230100--Sobic006G229901 Sobic001G181600 Sobic001G181600 Sobic003G154500--Sobic001G181600 Sobic005G119900 Sobic005G119900 Sobic003G154500--Sobic005G119900 Sobic003G154500--Sobic001G395900 Sobic003G154500--Sobic006G230200 Sobic003G154500--Sobic007G202480 Sobic003G154500--Sobic009G055300 Sobic003G154500--Sobic006G230100 Sobic001G218400 Sobic001G218400 Sobic003G154500--Sobic001G218400 Sobic003G154500--Sobic004G261500 Sobic010G097200 Sobic010G097200 Sobic005G033000--Sobic010G097200 Sobic005G033000--Sobic003G154500 Sobic005G033000--Sobic004G261500 Sobic009G065700 Sobic009G065700 Sobic005G033000--Sobic009G065700 Sobic005G033000--Sobic001G218400 Sobic001G414800 Sobic001G414800 Sobic005G033000--Sobic001G414800 Sobic002G096000 Sobic002G096000 Sobic005G033000--Sobic002G096000 Sobic004G079900 Sobic004G079900 Sobic005G033000--Sobic004G079900 Sobic001G499900 Sobic001G499900 Sobic005G033000--Sobic001G499900 Sobic006G230200--Sobic009G055300 Sobic006G230200--Sobic001G395900 Sobic006G230200--Sobic006G230100 Sobic006G230200--Sobic007G202480 Sobic006G230200--Sobic004G299500 Sobic005G069332 Sobic005G069332 Sobic006G230200--Sobic005G069332 Sobic008G105800 Sobic008G105800 Sobic006G230200--Sobic008G105800 Sobic006G230200--Sobic001G153100 Sobic006G230200--Sobic005G069166 Sobic008G058600--Sobic005G101000 Sobic003G045650 Sobic003G045650 Sobic008G058600--Sobic003G045650 Sobic008G058600--Sobic001G395900 Sobic008G058600--Sobic004G299500 Sobic008G058600--Sobic001G234100 Sobic005G176600 Sobic005G176600 Sobic008G058600--Sobic005G176600 Sobic008G058600--Sobic007G202480 Sobic008G058600--Sobic006G230100 Sobic008G058600--Sobic006G229901
Octagon: transcription factors


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