Gene annotation
Transcriptome id Sobic.003G086500.1
Synonym Sb03g007260
Functional annotation expressed protein
UniProt C5XQW0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g03900.1 : expressed protein
MaizeGDB (Corn) Zm00025a023630
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G232600 expressed protein -
2 Sobic.005G036300 expressed protein -
3 Sobic.006G160000 leucine-rich repeat family protein, putative, expressed -
4 Sobic.006G187200 rhoGAP domain containing protein, expressed -
5 Sobic.001G203700 formin-like protein 6 precursor, putative, expressed -
6 Sobic.002G096900 autophagy-related protein 3, putative, expressed -
7 Sobic.003G229800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@X8 domain containing protein, expressed -
8 Sobic.005G226000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@S-domain receptor-like protein kinase, putative, expressed -
9 Sobic.001G467500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.010G230300 galactosyltransferase, putative, expressed -
11 Sobic.002G308400 "MYB transcription factor(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659858)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.010G250100 "CIL, CIA2 like (Chloroplast import apparatus)"(PubMedID : 28640841)@CCT motif family protein, expressed -
13 Sobic.008G062900 H-BTB8 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
14 Sobic.002G155700 - -
15 Sobic.006G133000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
16 Sobic.001G106400 serine esterase family protein, putative, expressed K10606: FANCL, E3 ubiquitin-protein ligase FANCL
17 Sobic.001G082500 cytochrome P450, putative, expressed -
18 Sobic.004G256800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid transporter, putative, expressed -
19 Sobic.004G085700 expressed protein -
20 Sobic.006G018300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -


Gene co-expression network
sample Sobic003G086500 Sobic003G086500 Sobic004G232600 Sobic004G232600 Sobic003G086500--Sobic004G232600 Sobic005G036300 Sobic005G036300 Sobic003G086500--Sobic005G036300 Sobic006G160000 Sobic006G160000 Sobic003G086500--Sobic006G160000 Sobic006G187200 Sobic006G187200 Sobic003G086500--Sobic006G187200 Sobic001G203700 Sobic001G203700 Sobic003G086500--Sobic001G203700 Sobic002G096900 Sobic002G096900 Sobic003G086500--Sobic002G096900 Sobic003G229800 Sobic003G229800 Sobic003G086500--Sobic003G229800 Sobic005G226000 Sobic005G226000 Sobic003G086500--Sobic005G226000 Sobic001G467500 Sobic001G467500 Sobic003G086500--Sobic001G467500 Sobic009G153500 Sobic009G153500 Sobic004G232600--Sobic009G153500 Sobic003G256900 Sobic003G256900 Sobic004G232600--Sobic003G256900 Sobic005G170100 Sobic005G170100 Sobic004G232600--Sobic005G170100 Sobic010G027300 Sobic010G027300 Sobic004G232600--Sobic010G027300 Sobic004G232600--Sobic003G086500 Sobic003G205600 Sobic003G205600 Sobic004G232600--Sobic003G205600 Sobic008G062900 Sobic008G062900 Sobic004G232600--Sobic008G062900 Sobic003G083600 Sobic003G083600 Sobic004G232600--Sobic003G083600 Sobic001G348800 Sobic001G348800 Sobic004G232600--Sobic001G348800 Sobic001G442200 Sobic001G442200 Sobic005G036300--Sobic001G442200 Sobic005G003750 Sobic005G003750 Sobic005G036300--Sobic005G003750 Sobic005G036300--Sobic005G226000 Sobic010G168500 Sobic010G168500 Sobic005G036300--Sobic010G168500 Sobic010G230300 Sobic010G230300 Sobic005G036300--Sobic010G230300 Sobic005G036300--Sobic003G086500 Sobic007G194100 Sobic007G194100 Sobic005G036300--Sobic007G194100 Sobic009G025100 Sobic009G025100 Sobic005G036300--Sobic009G025100 Sobic003G036700 Sobic003G036700 Sobic005G036300--Sobic003G036700 Sobic006G160000--Sobic006G187200 Sobic002G153100 Sobic002G153100 Sobic006G160000--Sobic002G153100 Sobic006G160000--Sobic003G086500 Sobic004G079700 Sobic004G079700 Sobic006G160000--Sobic004G079700 Sobic006G109500 Sobic006G109500 Sobic006G160000--Sobic006G109500 Sobic006G018300 Sobic006G018300 Sobic006G160000--Sobic006G018300 Sobic006G160000--Sobic001G203700 Sobic006G160000--Sobic008G062900 Sobic009G079100 Sobic009G079100 Sobic006G160000--Sobic009G079100 Sobic006G187200--Sobic008G062900 Sobic006G187200--Sobic003G083600 Sobic006G187200--Sobic006G160000 Sobic006G187200--Sobic001G348800 Sobic006G078100 Sobic006G078100 Sobic006G187200--Sobic006G078100 Sobic001G460400 Sobic001G460400 Sobic006G187200--Sobic001G460400 Sobic001G002800 Sobic001G002800 Sobic006G187200--Sobic001G002800 Sobic007G172500 Sobic007G172500 Sobic006G187200--Sobic007G172500 Sobic001G227850 Sobic001G227850 Sobic006G187200--Sobic001G227850 Sobic010G118300 Sobic010G118300 Sobic001G203700--Sobic010G118300 Sobic001G203700--Sobic003G229800 Sobic002G238500 Sobic002G238500 Sobic001G203700--Sobic002G238500 Sobic002G081700 Sobic002G081700 Sobic001G203700--Sobic002G081700 Sobic007G129000 Sobic007G129000 Sobic001G203700--Sobic007G129000 Sobic002G091000 Sobic002G091000 Sobic001G203700--Sobic002G091000 Sobic001G203700--Sobic005G226000 Sobic001G203700--Sobic003G086500 Sobic003G419400 Sobic003G419400 Sobic001G203700--Sobic003G419400 Sobic002G155700 Sobic002G155700 Sobic002G096900--Sobic002G155700 Sobic007G087400 Sobic007G087400 Sobic002G096900--Sobic007G087400 Sobic010G062400 Sobic010G062400 Sobic002G096900--Sobic010G062400 Sobic008G014700 Sobic008G014700 Sobic002G096900--Sobic008G014700 Sobic007G154100 Sobic007G154100 Sobic002G096900--Sobic007G154100 Sobic002G096900--Sobic009G153500 Sobic002G096900--Sobic010G230300 Sobic005G066366 Sobic005G066366 Sobic002G096900--Sobic005G066366 Sobic005G110511 Sobic005G110511 Sobic002G096900--Sobic005G110511 Sobic006G174200 Sobic006G174200 Sobic003G229800--Sobic006G174200 Sobic003G229800--Sobic005G170100 Sobic003G229800--Sobic003G083600 Sobic010G234300 Sobic010G234300 Sobic003G229800--Sobic010G234300 Sobic003G229800--Sobic001G203700 Sobic001G471800 Sobic001G471800 Sobic003G229800--Sobic001G471800 Sobic004G085700 Sobic004G085700 Sobic003G229800--Sobic004G085700 Sobic003G229800--Sobic004G232600 Sobic003G229800--Sobic003G086500 Sobic002G247300 Sobic002G247300 Sobic005G226000--Sobic002G247300 Sobic005G226000--Sobic005G003750 Sobic001G368900 Sobic001G368900 Sobic005G226000--Sobic001G368900 Sobic001G484100 Sobic001G484100 Sobic005G226000--Sobic001G484100 Sobic005G226000--Sobic009G025100 Sobic002G008200 Sobic002G008200 Sobic005G226000--Sobic002G008200 Sobic003G430100 Sobic003G430100 Sobic005G226000--Sobic003G430100 Sobic001G518700 Sobic001G518700 Sobic005G226000--Sobic001G518700 Sobic007G091200 Sobic007G091200 Sobic005G226000--Sobic007G091200 Sobic001G503000 Sobic001G503000 Sobic001G467500--Sobic001G503000 Sobic006G209000 Sobic006G209000 Sobic001G467500--Sobic006G209000 Sobic001G467500--Sobic001G002800 Sobic001G467500--Sobic001G348800 Sobic010G096700 Sobic010G096700 Sobic001G467500--Sobic010G096700 Sobic003G215300 Sobic003G215300 Sobic001G467500--Sobic003G215300 Sobic001G467500--Sobic001G471800 Sobic007G073000 Sobic007G073000 Sobic001G467500--Sobic007G073000 Sobic001G506600 Sobic001G506600 Sobic001G467500--Sobic001G506600
Octagon: transcription factors


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