Gene annotation
Transcriptome id Sobic.004G256800.3,Sobic.004G256800.1,Sobic.004G256800.2
Synonym Sb04g029540, AAP7
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
amino acid transporter, putative, expressed
UniProt A0A1Z5RP09 , A0A1Z5RPI1 , C5XZS9
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF262
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23810 : amino acid permease 7
RAP-DB (Rice) LOC_Os02g49060.1 : amino acid transporter, putative, expressed
MaizeGDB (Corn) Zm00025a025708 , Zm00025a056273 , Zm00025a011043 , Zm00025a034135 , Zm00025a042315 , Zm00025a054084 , Zm00025a054082 , Zm00025a051049 , Zm00025a021860
Brachypodium PNT69502 , PNT69503 , PNT69500 , PNT69501 , KQK10874 , PNT61269 , PNT61268 , KQK01542 , KQK18008 , PNT69499 , PNT61270 , KQK18009
Barley HORVU7Hr1G088560.6 , HORVU7Hr1G088560.7 , HORVU7Hr1G088560.4 , HORVU7Hr1G088560.5 , HORVU7Hr1G088560.2 , HORVU7Hr1G088560.3 , HORVU7Hr1G088560.1 , HORVU6Hr1G071810.20 , HORVU6Hr1G071810.21 , HORVU6Hr1G071840.12 , HORVU6Hr1G071840.10 , HORVU3Hr1G081610.6 , HORVU3Hr1G081610.5 , HORVU3Hr1G081610.4 , HORVU6Hr1G071810.17 , HORVU6Hr1G071810.16 , HORVU6Hr1G071810.15 , HORVU6Hr1G071810.14 , HORVU6Hr1G071810.13 , HORVU6Hr1G071810.12 , HORVU6Hr1G071810.11 , HORVU6Hr1G071810.10 , HORVU6Hr1G071810.19 , HORVU6Hr1G071810.18 , HORVU2Hr1G084780.9 , HORVU2Hr1G084780.8 , HORVU2Hr1G084780.7 , HORVU2Hr1G084780.6 , HORVU2Hr1G084780.5 , HORVU2Hr1G084780.4 , HORVU2Hr1G084780.3 , HORVU2Hr1G084780.2 , HORVU2Hr1G084780.1 , HORVU3Hr1G081610.2 , HORVU6Hr1G071840.4 , HORVU6Hr1G071840.5 , HORVU6Hr1G071840.6 , HORVU6Hr1G071840.7 , HORVU6Hr1G071840.1 , HORVU6Hr1G071840.2 , HORVU6Hr1G071840.3 , HORVU6Hr1G071840.8 , HORVU6Hr1G071840.9 , HORVU7Hr1G088510.3 , HORVU7Hr1G088510.2 , HORVU7Hr1G088510.1 , HORVU7Hr1G088510.7 , HORVU7Hr1G088510.6 , HORVU7Hr1G088510.4 , HORVU7Hr1G088510.8 , HORVU6Hr1G071810.9 , HORVU6Hr1G071810.8 , HORVU6Hr1G071810.7 , HORVU6Hr1G071810.6 , HORVU6Hr1G071810.5 , HORVU6Hr1G071810.4 , HORVU6Hr1G071810.3 , HORVU6Hr1G071810.2 , HORVU6Hr1G071810.1 , HORVU6Hr1G071840.11 , HORVU2Hr1G081790.8 , HORVU2Hr1G081790.3 , HORVU2Hr1G081790.2 , HORVU2Hr1G081790.1 , HORVU2Hr1G081790.6 , HORVU2Hr1G081790.5 , HORVU2Hr1G081790.4
Wheat TraesCS2D02G500000 , TraesCS2D02G331800 , TraesCS2D02G331800 , TraesCS2B02G351100 , TraesCS1A02G264500 , TraesCS2A02G331100 , TraesCS2A02G331100 , TraesCS7A02G188200 , TraesCS2A02G499800 , TraesCS7D02G366000 , TraesCS7A02G356600 , TraesCS6D02G265800 , TraesCS6B02G314200 , TraesCS6D02G265600 , TraesCS2B02G527800 , TraesCS1D02G264700 , TraesCS7B02G271200 , TraesCS7B02G271151 , TraesCS2B02G351100 , TraesCS3A02G388100 , TraesCS1B02G275200 , TraesCS6B02G314000 , TraesCS3D02G381400 , TraesCS3B02G420600 , TraesCS7D02G189000 , TraesCS7D02G366200 , TraesCS7B02G093200 , TraesCS7A02G356639 , TraesCS6A02G285200 , TraesCS3A02G388000 , TraesCS6A02G285300
Populus -


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cDNA sequences
Sobic.004G256800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G061033 - -
2 Sobic.001G082500 cytochrome P450, putative, expressed -
3 Sobic.001G206300 dof zinc finger domain containing protein, putative, expressed -
4 Sobic.003G086500 expressed protein -
5 Sobic.003G224200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
6 Sobic.003G289900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ENTH domain containing protein, expressed K12471: epsin
7 Sobic.003G197300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AR791, putative, expressed -
8 Sobic.003G036700 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
9 Sobic.001G379000 aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
10 Sobic.001G417600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
11 Sobic.002G020900 GCRP5 - Glycine and cysteine rich family protein precursor, expressed -
12 Sobic.003G129400 glycosyltransferase family 43 protein, putative, expressed K00735: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1
13 Sobic.003G019700 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.006G133000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
15 Sobic.001G168500 serpin domain containing protein, putative, expressed K13963: serpin B
16 Sobic.006G160000 leucine-rich repeat family protein, putative, expressed -
17 Sobic.002G029800 UDP-arabinose 4-epimerase 1, putative, expressed K12448: UXE, UDP-arabinose 4-epimerase
18 Sobic.002G225300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CPuORF39 - conserved peptide uORF-containing transcript, expressed K09419: heat shock transcription factor, other eukaryote
19 Sobic.007G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger, C3HC4 type family protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
20 Sobic.006G018300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -


Gene co-expression network
sample Sobic004G256800 Sobic004G256800 Sobic005G061033 Sobic005G061033 Sobic004G256800--Sobic005G061033 Sobic001G082500 Sobic001G082500 Sobic004G256800--Sobic001G082500 Sobic001G206300 Sobic001G206300 Sobic004G256800--Sobic001G206300 Sobic003G086500 Sobic003G086500 Sobic004G256800--Sobic003G086500 Sobic003G224200 Sobic003G224200 Sobic004G256800--Sobic003G224200 Sobic003G289900 Sobic003G289900 Sobic004G256800--Sobic003G289900 Sobic003G197300 Sobic003G197300 Sobic004G256800--Sobic003G197300 Sobic003G036700 Sobic003G036700 Sobic004G256800--Sobic003G036700 Sobic001G379000 Sobic001G379000 Sobic004G256800--Sobic001G379000 Sobic005G061000 Sobic005G061000 Sobic005G061033--Sobic005G061000 Sobic001G237000 Sobic001G237000 Sobic005G061033--Sobic001G237000 Sobic005G061033--Sobic003G197300 Sobic006G119600 Sobic006G119600 Sobic005G061033--Sobic006G119600 Sobic005G061033--Sobic004G256800 Sobic005G061033--Sobic001G206300 Sobic001G502700 Sobic001G502700 Sobic005G061033--Sobic001G502700 Sobic002G225300 Sobic002G225300 Sobic005G061033--Sobic002G225300 Sobic005G061033--Sobic003G224200 Sobic001G082500--Sobic003G036700 Sobic001G417600 Sobic001G417600 Sobic001G082500--Sobic001G417600 Sobic010G133700 Sobic010G133700 Sobic001G082500--Sobic010G133700 Sobic006G147400 Sobic006G147400 Sobic001G082500--Sobic006G147400 Sobic006G132400 Sobic006G132400 Sobic001G082500--Sobic006G132400 Sobic001G196700 Sobic001G196700 Sobic001G082500--Sobic001G196700 Sobic006G139000 Sobic006G139000 Sobic001G082500--Sobic006G139000 Sobic007G194800 Sobic007G194800 Sobic001G082500--Sobic007G194800 Sobic001G280000 Sobic001G280000 Sobic001G082500--Sobic001G280000 Sobic001G206300--Sobic003G197300 Sobic001G206300--Sobic001G379000 Sobic007G034600 Sobic007G034600 Sobic001G206300--Sobic007G034600 Sobic003G436500 Sobic003G436500 Sobic001G206300--Sobic003G436500 Sobic003G358200 Sobic003G358200 Sobic001G206300--Sobic003G358200 Sobic006G096300 Sobic006G096300 Sobic001G206300--Sobic006G096300 Sobic003G129400 Sobic003G129400 Sobic001G206300--Sobic003G129400 Sobic006G164000 Sobic006G164000 Sobic001G206300--Sobic006G164000 Sobic002G400400 Sobic002G400400 Sobic001G206300--Sobic002G400400 Sobic004G232600 Sobic004G232600 Sobic003G086500--Sobic004G232600 Sobic005G036300 Sobic005G036300 Sobic003G086500--Sobic005G036300 Sobic006G160000 Sobic006G160000 Sobic003G086500--Sobic006G160000 Sobic006G187200 Sobic006G187200 Sobic003G086500--Sobic006G187200 Sobic001G203700 Sobic001G203700 Sobic003G086500--Sobic001G203700 Sobic002G096900 Sobic002G096900 Sobic003G086500--Sobic002G096900 Sobic003G229800 Sobic003G229800 Sobic003G086500--Sobic003G229800 Sobic005G226000 Sobic005G226000 Sobic003G086500--Sobic005G226000 Sobic001G467500 Sobic001G467500 Sobic003G086500--Sobic001G467500 Sobic003G224200--Sobic006G119600 Sobic003G281600 Sobic003G281600 Sobic003G224200--Sobic003G281600 Sobic009G238600 Sobic009G238600 Sobic003G224200--Sobic009G238600 Sobic003G224200--Sobic005G061033 Sobic003G224200--Sobic005G061000 Sobic003G224200--Sobic003G197300 Sobic010G146500 Sobic010G146500 Sobic003G224200--Sobic010G146500 Sobic001G027800 Sobic001G027800 Sobic003G224200--Sobic001G027800 Sobic010G114300 Sobic010G114300 Sobic003G224200--Sobic010G114300 Sobic003G289900--Sobic002G225300 Sobic009G153000 Sobic009G153000 Sobic003G289900--Sobic009G153000 Sobic003G033000 Sobic003G033000 Sobic003G289900--Sobic003G033000 Sobic004G353600 Sobic004G353600 Sobic003G289900--Sobic004G353600 Sobic009G179600 Sobic009G179600 Sobic003G289900--Sobic009G179600 Sobic003G332000 Sobic003G332000 Sobic003G289900--Sobic003G332000 Sobic009G118600 Sobic009G118600 Sobic003G289900--Sobic009G118600 Sobic003G289900--Sobic003G197300 Sobic004G039300 Sobic004G039300 Sobic003G289900--Sobic004G039300 Sobic005G110421 Sobic005G110421 Sobic003G197300--Sobic005G110421 Sobic003G197300--Sobic001G206300 Sobic003G197300--Sobic002G225300 Sobic001G510400 Sobic001G510400 Sobic003G197300--Sobic001G510400 Sobic003G197300--Sobic005G061033 Sobic002G185300 Sobic002G185300 Sobic003G197300--Sobic002G185300 Sobic003G197300--Sobic003G289900 Sobic003G197300--Sobic005G061000 Sobic003G197300--Sobic003G281600 Sobic003G036700--Sobic010G133700 Sobic003G036700--Sobic001G196700 Sobic003G036700--Sobic006G132400 Sobic003G095600 Sobic003G095600 Sobic003G036700--Sobic003G095600 Sobic010G168500 Sobic010G168500 Sobic003G036700--Sobic010G168500 Sobic003G036700--Sobic001G417600 Sobic003G036700--Sobic001G082500 Sobic003G376000 Sobic003G376000 Sobic003G036700--Sobic003G376000 Sobic003G036700--Sobic006G147400 Sobic001G379000--Sobic003G129400 Sobic001G379000--Sobic003G358200 Sobic009G156600 Sobic009G156600 Sobic001G379000--Sobic009G156600 Sobic001G379000--Sobic001G206300 Sobic007G152500 Sobic007G152500 Sobic001G379000--Sobic007G152500 Sobic004G155200 Sobic004G155200 Sobic001G379000--Sobic004G155200 Sobic001G379000--Sobic006G164000 Sobic008G092400 Sobic008G092400 Sobic001G379000--Sobic008G092400 Sobic010G093400 Sobic010G093400 Sobic001G379000--Sobic010G093400
Octagon: transcription factors


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