Gene annotation
Transcriptome id Sobic.001G168500.1
Synonym Sb01g014730
Functional annotation serpin domain containing protein, putative, expressed
UniProt C5WT45
Pfam PF00079
Panther DB PTHR11461 PTHR11461:SF171
NCBI CDD KOG2392; Serpin
KEGG Orthology K13963; serpin B
Gene Ontology GO:0005615; extracellular space


Orthologs (automatic annotation)
TAIR AT1G47710 : Serine protease inhibitor (SERPIN) family protein
RAP-DB (Rice) LOC_Os03g41438.1 : serpin domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK14207
Barley -
Wheat TraesCS4B02G079100
Populus PNT02856


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G193600 endoglucanase, putative, expressed -
2 Sobic.001G294600 RNA recognition motif containing protein, putative, expressed K14396: PABPN1, polyadenylate-binding protein 2
3 Sobic.003G252900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
4 Sobic.003G226300 Ceramidase family protein (At)(PubMedID : 27208977)@neutral ceramidase precursor, putative, expressed K12349: neutral ceramidase
5 Sobic.001G168600 serpin domain containing protein, putative, expressed K13963: serpin B
6 Sobic.004G264600 expressed protein -
7 Sobic.007G225300 2-nitropropane dioxygenase family, putative, expressed -
8 Sobic.004G172100 serine/threonine-protein kinase, putative, expressed -
9 Sobic.001G480800 Protein strubbelig-receptor family 7(PubMedID : 31721651)@STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
10 Sobic.006G148700 kinase, pfkB family, putative, expressed K00856: E2.7.1.20, adenosine kinase
11 Sobic.008G043500 harpin-induced protein 1 domain containing protein, expressed -
12 Sobic.006G242100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
13 Sobic.010G250100 "CIL, CIA2 like (Chloroplast import apparatus)"(PubMedID : 28640841)@CCT motif family protein, expressed -
14 Sobic.003G094800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinacetylesterase domain containing protein, expressed -
15 Sobic.003G414600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thiamin pyrophosphokinase 1, putative, expressed K00949: thiN, TPK1, thiamine pyrophosphokinase
16 Sobic.009G182200 domain of unknown function, DUF250 domain containing protein, expressed -
17 Sobic.009G102600 DUF640 domain containing protein, putative, expressed -
18 Sobic.004G333100 expressed protein -
19 Sobic.002G321500 ras-related protein, putative, expressed K07976: Rab family, other
20 Sobic.008G058700 metal cation transporter, putative, expressed -


Gene co-expression network
sample Sobic001G168500 Sobic001G168500 Sobic002G193600 Sobic002G193600 Sobic001G168500--Sobic002G193600 Sobic001G294600 Sobic001G294600 Sobic001G168500--Sobic001G294600 Sobic003G252900 Sobic003G252900 Sobic001G168500--Sobic003G252900 Sobic003G226300 Sobic003G226300 Sobic001G168500--Sobic003G226300 Sobic001G168600 Sobic001G168600 Sobic001G168500--Sobic001G168600 Sobic004G264600 Sobic004G264600 Sobic001G168500--Sobic004G264600 Sobic007G225300 Sobic007G225300 Sobic001G168500--Sobic007G225300 Sobic004G172100 Sobic004G172100 Sobic001G168500--Sobic004G172100 Sobic001G480800 Sobic001G480800 Sobic001G168500--Sobic001G480800 Sobic002G193600--Sobic001G168500 Sobic005G121200 Sobic005G121200 Sobic002G193600--Sobic005G121200 Sobic008G029300 Sobic008G029300 Sobic002G193600--Sobic008G029300 Sobic002G193600--Sobic003G226300 Sobic002G173800 Sobic002G173800 Sobic002G193600--Sobic002G173800 Sobic002G075800 Sobic002G075800 Sobic002G193600--Sobic002G075800 Sobic004G203500 Sobic004G203500 Sobic002G193600--Sobic004G203500 Sobic005G061033 Sobic005G061033 Sobic002G193600--Sobic005G061033 Sobic002G193600--Sobic001G294600 Sobic003G358200 Sobic003G358200 Sobic001G294600--Sobic003G358200 Sobic001G294600--Sobic003G252900 Sobic008G058700 Sobic008G058700 Sobic001G294600--Sobic008G058700 Sobic006G107400 Sobic006G107400 Sobic001G294600--Sobic006G107400 Sobic005G084900 Sobic005G084900 Sobic001G294600--Sobic005G084900 Sobic001G067000 Sobic001G067000 Sobic001G294600--Sobic001G067000 Sobic001G294600--Sobic001G168500 Sobic001G379000 Sobic001G379000 Sobic001G294600--Sobic001G379000 Sobic006G164000 Sobic006G164000 Sobic001G294600--Sobic006G164000 Sobic003G252900--Sobic008G058700 Sobic003G312400 Sobic003G312400 Sobic003G252900--Sobic003G312400 Sobic003G126800 Sobic003G126800 Sobic003G252900--Sobic003G126800 Sobic003G319000 Sobic003G319000 Sobic003G252900--Sobic003G319000 Sobic003G410400 Sobic003G410400 Sobic003G252900--Sobic003G410400 Sobic003G252900--Sobic001G294600 Sobic006G129000 Sobic006G129000 Sobic003G252900--Sobic006G129000 Sobic009G182200 Sobic009G182200 Sobic003G252900--Sobic009G182200 Sobic010G088300 Sobic010G088300 Sobic003G252900--Sobic010G088300 Sobic003G226300--Sobic001G168500 Sobic003G226300--Sobic002G193600 Sobic003G226300--Sobic001G294600 Sobic003G226300--Sobic003G252900 Sobic001G401900 Sobic001G401900 Sobic003G226300--Sobic001G401900 Sobic003G226300--Sobic005G121200 Sobic004G108100 Sobic004G108100 Sobic003G226300--Sobic004G108100 Sobic003G222200 Sobic003G222200 Sobic003G226300--Sobic003G222200 Sobic001G452200 Sobic001G452200 Sobic003G226300--Sobic001G452200 Sobic003G400800 Sobic003G400800 Sobic001G168600--Sobic003G400800 Sobic004G282700 Sobic004G282700 Sobic001G168600--Sobic004G282700 Sobic007G076300 Sobic007G076300 Sobic001G168600--Sobic007G076300 Sobic002G252000 Sobic002G252000 Sobic001G168600--Sobic002G252000 Sobic006G008400 Sobic006G008400 Sobic001G168600--Sobic006G008400 Sobic003G410500 Sobic003G410500 Sobic001G168600--Sobic003G410500 Sobic009G236100 Sobic009G236100 Sobic001G168600--Sobic009G236100 Sobic001G096100 Sobic001G096100 Sobic001G168600--Sobic001G096100 Sobic003G130600 Sobic003G130600 Sobic001G168600--Sobic003G130600 Sobic010G008600 Sobic010G008600 Sobic004G264600--Sobic010G008600 Sobic006G242100 Sobic006G242100 Sobic004G264600--Sobic006G242100 Sobic004G303600 Sobic004G303600 Sobic004G264600--Sobic004G303600 Sobic004G264600--Sobic003G319000 Sobic004G264600--Sobic009G182200 Sobic004G264600--Sobic004G172100 Sobic004G264600--Sobic003G410400 Sobic010G030900 Sobic010G030900 Sobic004G264600--Sobic010G030900 Sobic009G194200 Sobic009G194200 Sobic004G264600--Sobic009G194200 Sobic003G353400 Sobic003G353400 Sobic007G225300--Sobic003G353400 Sobic005G195600 Sobic005G195600 Sobic007G225300--Sobic005G195600 Sobic003G052400 Sobic003G052400 Sobic007G225300--Sobic003G052400 Sobic004G337900 Sobic004G337900 Sobic007G225300--Sobic004G337900 Sobic007G148700 Sobic007G148700 Sobic007G225300--Sobic007G148700 Sobic009G229300 Sobic009G229300 Sobic007G225300--Sobic009G229300 Sobic007G225300--Sobic009G182200 Sobic007G225300--Sobic003G319000 Sobic001G237500 Sobic001G237500 Sobic007G225300--Sobic001G237500 Sobic004G172100--Sobic006G242100 Sobic003G095400 Sobic003G095400 Sobic004G172100--Sobic003G095400 Sobic009G030200 Sobic009G030200 Sobic004G172100--Sobic009G030200 Sobic006G087900 Sobic006G087900 Sobic004G172100--Sobic006G087900 Sobic009G102600 Sobic009G102600 Sobic004G172100--Sobic009G102600 Sobic003G278700 Sobic003G278700 Sobic004G172100--Sobic003G278700 Sobic009G099000 Sobic009G099000 Sobic004G172100--Sobic009G099000 Sobic004G257800 Sobic004G257800 Sobic004G172100--Sobic004G257800 Sobic001G294400 Sobic001G294400 Sobic004G172100--Sobic001G294400 Sobic001G480800--Sobic002G252000 Sobic004G272200 Sobic004G272200 Sobic001G480800--Sobic004G272200 Sobic001G480800--Sobic003G252900 Sobic001G099100 Sobic001G099100 Sobic001G480800--Sobic001G099100 Sobic002G333800 Sobic002G333800 Sobic001G480800--Sobic002G333800 Sobic009G079100 Sobic009G079100 Sobic001G480800--Sobic009G079100 Sobic002G128800 Sobic002G128800 Sobic001G480800--Sobic002G128800 Sobic002G387600 Sobic002G387600 Sobic001G480800--Sobic002G387600 Sobic004G051300 Sobic004G051300 Sobic001G480800--Sobic004G051300
Octagon: transcription factors


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