Gene annotation
Transcriptome id Sobic.001G480800.1
Synonym SORBI_3001G480800, SRF7, Sb01g045010, SORBIDRAFT_01g045010
Functional annotation Protein strubbelig-receptor family 7 (PubMedID : 31721651)
STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed
UniProt C5WVR0
Pfam PF08263 PF13855 PF07714
Panther DB PTHR27001 PTHR27001:SF64
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G14350 : STRUBBELIG-receptor family 7
RAP-DB (Rice) LOC_Os03g08550.1 : STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a053255 , Zm00025a000960
Brachypodium KQK04177 , KQK23279 , KQK23280 , KQK23281
Barley HORVU4Hr1G077420.2 , HORVU4Hr1G077420.3 , HORVU4Hr1G077420.1 , HORVU4Hr1G077420.6 , HORVU4Hr1G077420.7 , HORVU4Hr1G077420.4 , HORVU4Hr1G077420.5 , HORVU4Hr1G077420.8 , HORVU4Hr1G077420.9 , HORVU4Hr1G077420.10 , HORVU4Hr1G077420.11 , HORVU4Hr1G077420.12 , HORVU4Hr1G077420.13
Wheat TraesCS4B02G299900 , TraesCS4B02G299900 , TraesCS4A02G005100 , TraesCS4A02G005100 , TraesCS4A02G005100 , TraesCS4A02G005100 , TraesCS4D02G298800
Populus -


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cDNA sequences
Sobic.001G480800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
2 Sobic.004G272200 secretory carrier-associated membrane protein, putative, expressed -
3 Sobic.003G252900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
4 Sobic.001G099100 endoglucanase, putative, expressed K01179: endoglucanase
5 Sobic.002G333800 CSLF8 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed K00770: 1,4-beta-D-xylan synthase
6 Sobic.009G079100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
7 Sobic.002G128800 fiber protein Fb34, putative, expressed -
8 Sobic.002G387600 expressed protein -
9 Sobic.004G051300 galactosyltransferase, putative, expressed -
10 Sobic.006G236500 RNA recognition motif containing protein, putative, expressed -
11 Sobic.001G352500 expressed protein -
12 Sobic.001G063500 fasciclin domain containing protein, expressed -
13 Sobic.001G168600 serpin domain containing protein, putative, expressed K13963: serpin B
14 Sobic.008G043500 harpin-induced protein 1 domain containing protein, expressed -
15 Sobic.008G174900 IQ calmodulin-binding motif domain containing protein, expressed -
16 Sobic.003G094800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinacetylesterase domain containing protein, expressed -
17 Sobic.009G201800 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
18 Sobic.009G102100 DUF538 domain containing protein, putative, expressed -
19 Sobic.002G184900 SCO1 protein homolog, mitochondrial precursor, putative, expressed K07152: protein SCO1
20 Sobic.004G036800 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -


Gene co-expression network
sample Sobic001G480800 Sobic001G480800 Sobic002G252000 Sobic002G252000 Sobic001G480800--Sobic002G252000 Sobic004G272200 Sobic004G272200 Sobic001G480800--Sobic004G272200 Sobic003G252900 Sobic003G252900 Sobic001G480800--Sobic003G252900 Sobic001G099100 Sobic001G099100 Sobic001G480800--Sobic001G099100 Sobic002G333800 Sobic002G333800 Sobic001G480800--Sobic002G333800 Sobic009G079100 Sobic009G079100 Sobic001G480800--Sobic009G079100 Sobic002G128800 Sobic002G128800 Sobic001G480800--Sobic002G128800 Sobic002G387600 Sobic002G387600 Sobic001G480800--Sobic002G387600 Sobic004G051300 Sobic004G051300 Sobic001G480800--Sobic004G051300 Sobic002G252000--Sobic002G128800 Sobic002G338400 Sobic002G338400 Sobic002G252000--Sobic002G338400 Sobic001G418100 Sobic001G418100 Sobic002G252000--Sobic001G418100 Sobic002G396400 Sobic002G396400 Sobic002G252000--Sobic002G396400 Sobic006G156000 Sobic006G156000 Sobic002G252000--Sobic006G156000 Sobic001G038300 Sobic001G038300 Sobic002G252000--Sobic001G038300 Sobic001G107100 Sobic001G107100 Sobic002G252000--Sobic001G107100 Sobic003G443300 Sobic003G443300 Sobic002G252000--Sobic003G443300 Sobic003G219800 Sobic003G219800 Sobic002G252000--Sobic003G219800 Sobic008G103700 Sobic008G103700 Sobic004G272200--Sobic008G103700 Sobic004G272200--Sobic002G252000 Sobic001G007600 Sobic001G007600 Sobic004G272200--Sobic001G007600 Sobic010G238800 Sobic010G238800 Sobic004G272200--Sobic010G238800 Sobic004G272200--Sobic006G156000 Sobic004G138800 Sobic004G138800 Sobic004G272200--Sobic004G138800 Sobic004G272200--Sobic002G128800 Sobic006G236500 Sobic006G236500 Sobic004G272200--Sobic006G236500 Sobic001G096100 Sobic001G096100 Sobic004G272200--Sobic001G096100 Sobic008G058700 Sobic008G058700 Sobic003G252900--Sobic008G058700 Sobic003G312400 Sobic003G312400 Sobic003G252900--Sobic003G312400 Sobic003G126800 Sobic003G126800 Sobic003G252900--Sobic003G126800 Sobic003G319000 Sobic003G319000 Sobic003G252900--Sobic003G319000 Sobic003G410400 Sobic003G410400 Sobic003G252900--Sobic003G410400 Sobic001G294600 Sobic001G294600 Sobic003G252900--Sobic001G294600 Sobic006G129000 Sobic006G129000 Sobic003G252900--Sobic006G129000 Sobic009G182200 Sobic009G182200 Sobic003G252900--Sobic009G182200 Sobic010G088300 Sobic010G088300 Sobic003G252900--Sobic010G088300 Sobic001G099100--Sobic004G051300 Sobic002G118700 Sobic002G118700 Sobic001G099100--Sobic002G118700 Sobic002G276600 Sobic002G276600 Sobic001G099100--Sobic002G276600 Sobic002G075500 Sobic002G075500 Sobic001G099100--Sobic002G075500 Sobic010G090500 Sobic010G090500 Sobic001G099100--Sobic010G090500 Sobic009G026101 Sobic009G026101 Sobic001G099100--Sobic009G026101 Sobic009G125900 Sobic009G125900 Sobic001G099100--Sobic009G125900 Sobic003G353400 Sobic003G353400 Sobic001G099100--Sobic003G353400 Sobic001G099100--Sobic009G079100 Sobic002G333800--Sobic001G107100 Sobic002G333800--Sobic001G038300 Sobic001G409100 Sobic001G409100 Sobic002G333800--Sobic001G409100 Sobic006G191700 Sobic006G191700 Sobic002G333800--Sobic006G191700 Sobic002G333800--Sobic002G128800 Sobic002G251100 Sobic002G251100 Sobic002G333800--Sobic002G251100 Sobic002G333800--Sobic002G396400 Sobic006G278100 Sobic006G278100 Sobic002G333800--Sobic006G278100 Sobic003G340100 Sobic003G340100 Sobic002G333800--Sobic003G340100 Sobic009G079100--Sobic010G090500 Sobic003G198500 Sobic003G198500 Sobic009G079100--Sobic003G198500 Sobic009G079100--Sobic009G026101 Sobic009G079100--Sobic004G051300 Sobic007G040301 Sobic007G040301 Sobic009G079100--Sobic007G040301 Sobic007G211600 Sobic007G211600 Sobic009G079100--Sobic007G211600 Sobic001G133900 Sobic001G133900 Sobic009G079100--Sobic001G133900 Sobic009G246700 Sobic009G246700 Sobic009G079100--Sobic009G246700 Sobic009G206500 Sobic009G206500 Sobic009G079100--Sobic009G206500 Sobic002G128800--Sobic002G252000 Sobic007G150800 Sobic007G150800 Sobic002G128800--Sobic007G150800 Sobic002G128800--Sobic001G418100 Sobic002G128800--Sobic002G396400 Sobic001G475500 Sobic001G475500 Sobic002G128800--Sobic001G475500 Sobic010G052200 Sobic010G052200 Sobic002G128800--Sobic010G052200 Sobic002G128800--Sobic006G156000 Sobic002G128800--Sobic003G219800 Sobic002G128800--Sobic003G443300 Sobic007G084200 Sobic007G084200 Sobic002G387600--Sobic007G084200 Sobic004G274800 Sobic004G274800 Sobic002G387600--Sobic004G274800 Sobic006G267800 Sobic006G267800 Sobic002G387600--Sobic006G267800 Sobic002G387600--Sobic009G079100 Sobic002G387600--Sobic001G480800 Sobic010G118300 Sobic010G118300 Sobic002G387600--Sobic010G118300 Sobic001G063500 Sobic001G063500 Sobic002G387600--Sobic001G063500 Sobic009G102100 Sobic009G102100 Sobic002G387600--Sobic009G102100 Sobic001G257100 Sobic001G257100 Sobic002G387600--Sobic001G257100 Sobic004G051300--Sobic001G099100 Sobic004G051300--Sobic002G118700 Sobic004G051300--Sobic009G125900 Sobic004G051300--Sobic002G075500 Sobic004G051300--Sobic009G026101 Sobic004G051300--Sobic002G276600 Sobic004G051300--Sobic009G079100 Sobic004G051300--Sobic010G090500 Sobic009G063400 Sobic009G063400 Sobic004G051300--Sobic009G063400
Octagon: transcription factors


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