Gene annotation
Transcriptome id Sobic.002G387600.1
Synonym Sb02g040390, SUB1
Functional annotation expressed protein
UniProt C5X390
Pfam -
Panther DB PTHR31469 PTHR31469:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G08810 : calcium ion binding
RAP-DB (Rice) LOC_Os07g43990.1 : expressed protein
MaizeGDB (Corn) Zm00025a008911 , Zm00025a048874
Brachypodium KQK15053
Barley HORVU2Hr1G028070.1
Wheat -
Populus -


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cDNA sequences
Sobic.002G387600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G084200 expressed protein -
2 Sobic.004G274800 protein transport protein-related, putative, expressed -
3 Sobic.006G267800 WD-40 repeat family protein, putative, expressed -
4 Sobic.009G079100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
5 Sobic.001G480800 Protein strubbelig-receptor family 7(PubMedID : 31721651)@STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
6 Sobic.010G118300 auxin-independent growth promoter protein, putative, expressed -
7 Sobic.001G063500 fasciclin domain containing protein, expressed -
8 Sobic.009G102100 DUF538 domain containing protein, putative, expressed -
9 Sobic.001G257100 expressed protein -
10 Sobic.002G347900 GDP-fucose protein-O-fucosyltransferase 2, putative, expressed K03691: peptide-O-fucosyltransferase
11 Sobic.007G040301 - -
12 Sobic.010G004900 CWC15 homolog A, putative, expressed K12863: protein CWC15
13 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
14 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
15 Sobic.003G248300 kinase, pfkB family, putative, expressed K00852: rbsK, ribokinase
16 Sobic.006G191700 expansin precursor, putative, expressed -
17 Sobic.002G057500 C-Myc-binding protein, putative, expressed -
18 Sobic.008G039800 rhoGAP domain containing protein, expressed -
19 Sobic.008G174900 IQ calmodulin-binding motif domain containing protein, expressed -
20 Sobic.003G051100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic002G387600 Sobic002G387600 Sobic007G084200 Sobic007G084200 Sobic002G387600--Sobic007G084200 Sobic004G274800 Sobic004G274800 Sobic002G387600--Sobic004G274800 Sobic006G267800 Sobic006G267800 Sobic002G387600--Sobic006G267800 Sobic009G079100 Sobic009G079100 Sobic002G387600--Sobic009G079100 Sobic001G480800 Sobic001G480800 Sobic002G387600--Sobic001G480800 Sobic010G118300 Sobic010G118300 Sobic002G387600--Sobic010G118300 Sobic001G063500 Sobic001G063500 Sobic002G387600--Sobic001G063500 Sobic009G102100 Sobic009G102100 Sobic002G387600--Sobic009G102100 Sobic001G257100 Sobic001G257100 Sobic002G387600--Sobic001G257100 Sobic003G226700 Sobic003G226700 Sobic007G084200--Sobic003G226700 Sobic009G212100 Sobic009G212100 Sobic007G084200--Sobic009G212100 Sobic003G420300 Sobic003G420300 Sobic007G084200--Sobic003G420300 Sobic001G487200 Sobic001G487200 Sobic007G084200--Sobic001G487200 Sobic003G345000 Sobic003G345000 Sobic007G084200--Sobic003G345000 Sobic003G292700 Sobic003G292700 Sobic007G084200--Sobic003G292700 Sobic006G218900 Sobic006G218900 Sobic007G084200--Sobic006G218900 Sobic001G369800 Sobic001G369800 Sobic007G084200--Sobic001G369800 Sobic004G315700 Sobic004G315700 Sobic007G084200--Sobic004G315700 Sobic001G437500 Sobic001G437500 Sobic004G274800--Sobic001G437500 Sobic006G081000 Sobic006G081000 Sobic004G274800--Sobic006G081000 Sobic007G139500 Sobic007G139500 Sobic004G274800--Sobic007G139500 Sobic001G196000 Sobic001G196000 Sobic004G274800--Sobic001G196000 Sobic009G206500 Sobic009G206500 Sobic004G274800--Sobic009G206500 Sobic003G161500 Sobic003G161500 Sobic004G274800--Sobic003G161500 Sobic009G026101 Sobic009G026101 Sobic004G274800--Sobic009G026101 Sobic007G040301 Sobic007G040301 Sobic004G274800--Sobic007G040301 Sobic003G135400 Sobic003G135400 Sobic004G274800--Sobic003G135400 Sobic006G267800--Sobic007G084200 Sobic006G267800--Sobic001G369800 Sobic002G351100 Sobic002G351100 Sobic006G267800--Sobic002G351100 Sobic002G284100 Sobic002G284100 Sobic006G267800--Sobic002G284100 Sobic010G079100 Sobic010G079100 Sobic006G267800--Sobic010G079100 Sobic006G267800--Sobic003G226700 Sobic001G261549 Sobic001G261549 Sobic006G267800--Sobic001G261549 Sobic003G389100 Sobic003G389100 Sobic006G267800--Sobic003G389100 Sobic006G267800--Sobic001G487200 Sobic010G090500 Sobic010G090500 Sobic009G079100--Sobic010G090500 Sobic003G198500 Sobic003G198500 Sobic009G079100--Sobic003G198500 Sobic009G079100--Sobic009G026101 Sobic004G051300 Sobic004G051300 Sobic009G079100--Sobic004G051300 Sobic009G079100--Sobic007G040301 Sobic007G211600 Sobic007G211600 Sobic009G079100--Sobic007G211600 Sobic001G133900 Sobic001G133900 Sobic009G079100--Sobic001G133900 Sobic009G246700 Sobic009G246700 Sobic009G079100--Sobic009G246700 Sobic009G079100--Sobic009G206500 Sobic002G252000 Sobic002G252000 Sobic001G480800--Sobic002G252000 Sobic004G272200 Sobic004G272200 Sobic001G480800--Sobic004G272200 Sobic003G252900 Sobic003G252900 Sobic001G480800--Sobic003G252900 Sobic001G099100 Sobic001G099100 Sobic001G480800--Sobic001G099100 Sobic002G333800 Sobic002G333800 Sobic001G480800--Sobic002G333800 Sobic001G480800--Sobic009G079100 Sobic002G128800 Sobic002G128800 Sobic001G480800--Sobic002G128800 Sobic001G480800--Sobic002G387600 Sobic001G480800--Sobic004G051300 Sobic002G214200 Sobic002G214200 Sobic010G118300--Sobic002G214200 Sobic001G507000 Sobic001G507000 Sobic010G118300--Sobic001G507000 Sobic002G253900 Sobic002G253900 Sobic010G118300--Sobic002G253900 Sobic009G026800 Sobic009G026800 Sobic010G118300--Sobic009G026800 Sobic001G159800 Sobic001G159800 Sobic010G118300--Sobic001G159800 Sobic009G061000 Sobic009G061000 Sobic010G118300--Sobic009G061000 Sobic001G203700 Sobic001G203700 Sobic010G118300--Sobic001G203700 Sobic010G118300--Sobic007G139500 Sobic010G118300--Sobic001G437500 Sobic002G270000 Sobic002G270000 Sobic001G063500--Sobic002G270000 Sobic001G063500--Sobic002G128800 Sobic001G063500--Sobic009G026101 Sobic001G409100 Sobic001G409100 Sobic001G063500--Sobic001G409100 Sobic002G075500 Sobic002G075500 Sobic001G063500--Sobic002G075500 Sobic004G007600 Sobic004G007600 Sobic001G063500--Sobic004G007600 Sobic001G063500--Sobic002G252000 Sobic001G063500--Sobic001G133900 Sobic006G278100 Sobic006G278100 Sobic001G063500--Sobic006G278100 Sobic005G047000 Sobic005G047000 Sobic009G102100--Sobic005G047000 Sobic009G188300 Sobic009G188300 Sobic009G102100--Sobic009G188300 Sobic006G013900 Sobic006G013900 Sobic009G102100--Sobic006G013900 Sobic009G115100 Sobic009G115100 Sobic009G102100--Sobic009G115100 Sobic004G137900 Sobic004G137900 Sobic009G102100--Sobic004G137900 Sobic002G317600 Sobic002G317600 Sobic009G102100--Sobic002G317600 Sobic004G010700 Sobic004G010700 Sobic009G102100--Sobic004G010700 Sobic004G015300 Sobic004G015300 Sobic009G102100--Sobic004G015300 Sobic009G258600 Sobic009G258600 Sobic009G102100--Sobic009G258600 Sobic001G257100--Sobic002G387600 Sobic002G356800 Sobic002G356800 Sobic001G257100--Sobic002G356800 Sobic002G057500 Sobic002G057500 Sobic001G257100--Sobic002G057500 Sobic001G257100--Sobic001G480800 Sobic001G257100--Sobic001G203700 Sobic002G184900 Sobic002G184900 Sobic001G257100--Sobic002G184900 Sobic008G027700 Sobic008G027700 Sobic001G257100--Sobic008G027700 Sobic003G041500 Sobic003G041500 Sobic001G257100--Sobic003G041500 Sobic004G036800 Sobic004G036800 Sobic001G257100--Sobic004G036800
Octagon: transcription factors


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