Gene annotation
Transcriptome id Sobic.003G051100.1
Synonym NIK3, Sb03g004450
Functional annotation BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
UniProt C5XNE5
Pfam PF08263 PF13855 PF07714
Panther DB PTHR27001 PTHR27001:SF49
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G60800 : NSP-interacting kinase 3
RAP-DB (Rice) LOC_Os01g07630.1 : BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a023255 , Zm00025a020030 , Zm00025a035723
Brachypodium KQK02915 , KQK02914 , KQK02916 , KQK02913
Barley HORVU7Hr1G083870.8 , HORVU7Hr1G083870.1 , HORVU7Hr1G083870.3 , HORVU7Hr1G083870.2 , HORVU7Hr1G083870.5 , HORVU7Hr1G083870.4 , HORVU7Hr1G083870.7 , HORVU7Hr1G083870.6 , HORVU3Hr1G016240.12 , HORVU3Hr1G016240.13 , HORVU3Hr1G016240.10 , HORVU3Hr1G016240.11 , HORVU3Hr1G016240.16 , HORVU3Hr1G016240.17 , HORVU3Hr1G016240.14 , HORVU3Hr1G016240.15 , HORVU3Hr1G016240.18 , HORVU3Hr1G016240.19 , HORVU4Hr1G015180.3 , HORVU4Hr1G015180.2 , HORVU4Hr1G015180.4 , HORVU3Hr1G016240.1 , HORVU3Hr1G016240.3 , HORVU3Hr1G016240.4 , HORVU3Hr1G016240.5 , HORVU3Hr1G016240.6 , HORVU3Hr1G016240.7 , HORVU6Hr1G074570.6 , HORVU6Hr1G074570.5 , HORVU6Hr1G074570.3 , HORVU6Hr1G074570.1 , HORVU3Hr1G016240.20 , HORVU3Hr1G016240.8 , HORVU4Hr1G029640.4 , HORVU4Hr1G029640.3 , HORVU4Hr1G029640.2 , HORVU6Hr1G093140.1 , HORVU6Hr1G093140.3 , HORVU6Hr1G093140.2 , HORVU3Hr1G016240.9 , HORVU3Hr1G016240.2
Wheat TraesCS6D02G146100 , TraesCS6D02G146100 , TraesCS3D02G091000 , TraesCS3D02G091000 , TraesCS3D02G091000 , TraesCS6B02G184300 , TraesCS6B02G184300 , TraesCS3A02G091100 , TraesCS3A02G091100 , TraesCS3A02G091100 , TraesCS3A02G091100 , TraesCS3B02G106100 , TraesCS6A02G156100 , TraesCS6A02G156100 , TraesCS3B02G106100
Populus -


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cDNA sequences
Sobic.003G051100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G242000 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
2 Sobic.001G005800 - K10885: XRCC5, KU80, ATP-dependent DNA helicase 2 subunit 2
3 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
4 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
5 Sobic.009G167100 TBC domain containing protein, expressed -
6 Sobic.007G084200 expressed protein -
7 Sobic.006G218900 TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
8 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
9 Sobic.003G415100 BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
10 Sobic.002G247200 jmjC domain-containing protein 5, putative, expressed K10277: KDM8, lysine-specific demethylase 8
11 Sobic.002G253900 growth regulator related protein, putative, expressed -
12 Sobic.009G061000 DNA binding protein, putative, expressed -
13 Sobic.001G540700 expressed protein -
14 Sobic.003G345000 CAMK_CAMK_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
15 Sobic.006G084300 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
16 Sobic.008G045800 PHD-finger family protein, expressed -
17 Sobic.002G033700 AIR9 protein, putative, expressed -
18 Sobic.006G254500 IQ calmodulin-binding motif family protein, putative, expressed -
19 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
20 Sobic.006G200901 - -


Gene co-expression network
sample Sobic003G051100 Sobic003G051100 Sobic004G242000 Sobic004G242000 Sobic003G051100--Sobic004G242000 Sobic001G005800 Sobic001G005800 Sobic003G051100--Sobic001G005800 Sobic009G212100 Sobic009G212100 Sobic003G051100--Sobic009G212100 Sobic009G254000 Sobic009G254000 Sobic003G051100--Sobic009G254000 Sobic009G167100 Sobic009G167100 Sobic003G051100--Sobic009G167100 Sobic007G084200 Sobic007G084200 Sobic003G051100--Sobic007G084200 Sobic006G218900 Sobic006G218900 Sobic003G051100--Sobic006G218900 Sobic004G315700 Sobic004G315700 Sobic003G051100--Sobic004G315700 Sobic003G415100 Sobic003G415100 Sobic003G051100--Sobic003G415100 Sobic010G256200 Sobic010G256200 Sobic004G242000--Sobic010G256200 Sobic002G252900 Sobic002G252900 Sobic004G242000--Sobic002G252900 Sobic004G242000--Sobic003G051100 Sobic004G015300 Sobic004G015300 Sobic004G242000--Sobic004G015300 Sobic002G388100 Sobic002G388100 Sobic004G242000--Sobic002G388100 Sobic009G105000 Sobic009G105000 Sobic004G242000--Sobic009G105000 Sobic004G242000--Sobic003G415100 Sobic002G051200 Sobic002G051200 Sobic004G242000--Sobic002G051200 Sobic009G060400 Sobic009G060400 Sobic004G242000--Sobic009G060400 Sobic002G253900 Sobic002G253900 Sobic001G005800--Sobic002G253900 Sobic008G045800 Sobic008G045800 Sobic001G005800--Sobic008G045800 Sobic002G056000 Sobic002G056000 Sobic001G005800--Sobic002G056000 Sobic002G335500 Sobic002G335500 Sobic001G005800--Sobic002G335500 Sobic009G148000 Sobic009G148000 Sobic001G005800--Sobic009G148000 Sobic006G200901 Sobic006G200901 Sobic001G005800--Sobic006G200901 Sobic006G106200 Sobic006G106200 Sobic001G005800--Sobic006G106200 Sobic004G014100 Sobic004G014100 Sobic001G005800--Sobic004G014100 Sobic002G343000 Sobic002G343000 Sobic001G005800--Sobic002G343000 Sobic001G487200 Sobic001G487200 Sobic009G212100--Sobic001G487200 Sobic009G212100--Sobic004G315700 Sobic001G296800 Sobic001G296800 Sobic009G212100--Sobic001G296800 Sobic003G226700 Sobic003G226700 Sobic009G212100--Sobic003G226700 Sobic009G212100--Sobic007G084200 Sobic006G267500 Sobic006G267500 Sobic009G212100--Sobic006G267500 Sobic006G084300 Sobic006G084300 Sobic009G212100--Sobic006G084300 Sobic001G369800 Sobic001G369800 Sobic009G212100--Sobic001G369800 Sobic006G254500 Sobic006G254500 Sobic009G212100--Sobic006G254500 Sobic006G140300 Sobic006G140300 Sobic009G254000--Sobic006G140300 Sobic007G197100 Sobic007G197100 Sobic009G254000--Sobic007G197100 Sobic003G298900 Sobic003G298900 Sobic009G254000--Sobic003G298900 Sobic002G366000 Sobic002G366000 Sobic009G254000--Sobic002G366000 Sobic001G540700 Sobic001G540700 Sobic009G254000--Sobic001G540700 Sobic003G224700 Sobic003G224700 Sobic009G254000--Sobic003G224700 Sobic002G006100 Sobic002G006100 Sobic009G254000--Sobic002G006100 Sobic004G250600 Sobic004G250600 Sobic009G254000--Sobic004G250600 Sobic005G013300 Sobic005G013300 Sobic009G254000--Sobic005G013300 Sobic010G250800 Sobic010G250800 Sobic009G167100--Sobic010G250800 Sobic009G061000 Sobic009G061000 Sobic009G167100--Sobic009G061000 Sobic006G257200 Sobic006G257200 Sobic009G167100--Sobic006G257200 Sobic001G385400 Sobic001G385400 Sobic009G167100--Sobic001G385400 Sobic008G015200 Sobic008G015200 Sobic009G167100--Sobic008G015200 Sobic002G320600 Sobic002G320600 Sobic009G167100--Sobic002G320600 Sobic003G027800 Sobic003G027800 Sobic009G167100--Sobic003G027800 Sobic009G052100 Sobic009G052100 Sobic009G167100--Sobic009G052100 Sobic008G192700 Sobic008G192700 Sobic009G167100--Sobic008G192700 Sobic007G084200--Sobic003G226700 Sobic007G084200--Sobic009G212100 Sobic003G420300 Sobic003G420300 Sobic007G084200--Sobic003G420300 Sobic007G084200--Sobic001G487200 Sobic003G345000 Sobic003G345000 Sobic007G084200--Sobic003G345000 Sobic003G292700 Sobic003G292700 Sobic007G084200--Sobic003G292700 Sobic007G084200--Sobic006G218900 Sobic007G084200--Sobic001G369800 Sobic007G084200--Sobic004G315700 Sobic006G218900--Sobic004G315700 Sobic006G218900--Sobic001G369800 Sobic006G218900--Sobic003G226700 Sobic006G218900--Sobic001G540700 Sobic006G218900--Sobic002G253900 Sobic006G218900--Sobic003G345000 Sobic006G218900--Sobic001G487200 Sobic002G284100 Sobic002G284100 Sobic006G218900--Sobic002G284100 Sobic006G218900--Sobic007G084200 Sobic004G315700--Sobic001G487200 Sobic004G315700--Sobic009G212100 Sobic004G315700--Sobic001G296800 Sobic004G315700--Sobic009G052100 Sobic004G315700--Sobic006G084300 Sobic004G315700--Sobic003G420300 Sobic004G315700--Sobic006G218900 Sobic004G315700--Sobic003G345000 Sobic004G315700--Sobic001G540700 Sobic001G346700 Sobic001G346700 Sobic003G415100--Sobic001G346700 Sobic009G069200 Sobic009G069200 Sobic003G415100--Sobic009G069200 Sobic002G390400 Sobic002G390400 Sobic003G415100--Sobic002G390400 Sobic009G257500 Sobic009G257500 Sobic003G415100--Sobic009G257500 Sobic001G090300 Sobic001G090300 Sobic003G415100--Sobic001G090300 Sobic001G123201 Sobic001G123201 Sobic003G415100--Sobic001G123201 Sobic006G126600 Sobic006G126600 Sobic003G415100--Sobic006G126600 Sobic006G091850 Sobic006G091850 Sobic003G415100--Sobic006G091850 Sobic003G253400 Sobic003G253400 Sobic003G415100--Sobic003G253400
Octagon: transcription factors


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