Gene annotation
Transcriptome id Sobic.009G254000.1
Synonym Sb09g030440
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
serine/threonine-protein kinase, putative, expressed
UniProt C5YWY8
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF119
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G59110 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os10g35450.1 : serine/threonine-protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a044772 , Zm00025a013379 , Zm00025a043262
Brachypodium KQK04179 , KQK04178 , KQK04596 , KQK04180
Barley HORVU3Hr1G041810.5 , HORVU3Hr1G041810.4 , HORVU3Hr1G041810.7 , HORVU3Hr1G041810.6 , HORVU3Hr1G041810.3 , HORVU3Hr1G041810.2 , HORVU3Hr1G041810.9 , HORVU3Hr1G041810.8 , HORVU1Hr1G094050.1 , HORVU1Hr1G094050.4 , HORVU1Hr1G094050.3 , HORVU1Hr1G094050.2 , HORVU1Hr1G094050.5
Wheat TraesCS1B02G469400 , TraesCS1B02G468800 , TraesCS1B02G468800 , TraesCS1B02G468800 , TraesCS3B02G257200 , TraesCS1D02G443100 , TraesCS1A02G433500
Populus -


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cDNA sequences
Sobic.009G254000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G140300 expressed protein -
2 Sobic.007G197100 expressed protein -
3 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
4 Sobic.002G366000 X8 domain containing protein, expressed -
5 Sobic.001G540700 expressed protein -
6 Sobic.003G224700 glycosyltransferase family protein 1, putative, expressed -
7 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
8 Sobic.004G250600 NHL repeat-containing protein, putative, expressed -
9 Sobic.005G013300 vacuolar-sorting receptor precursor, putative, expressed -
10 Sobic.001G423300 outer membrane protein, OMP85 family, putative, expressed -
11 Sobic.008G045800 PHD-finger family protein, expressed -
12 Sobic.002G302600 OsFBX291 - F-box domain containing protein, expressed -
13 Sobic.009G257500 expressed protein -
14 Sobic.003G240100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G217500 expressed protein -
16 Sobic.002G253900 growth regulator related protein, putative, expressed -
17 Sobic.004G041100 ATEXO70G1, putative, expressed K07195: EXOC7, exocyst complex component 7
18 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
19 Sobic.009G205400 RING-H2 finger protein ATL2M, putative, expressed -
20 Sobic.006G200901 - -


Gene co-expression network
sample Sobic009G254000 Sobic009G254000 Sobic006G140300 Sobic006G140300 Sobic009G254000--Sobic006G140300 Sobic007G197100 Sobic007G197100 Sobic009G254000--Sobic007G197100 Sobic003G298900 Sobic003G298900 Sobic009G254000--Sobic003G298900 Sobic002G366000 Sobic002G366000 Sobic009G254000--Sobic002G366000 Sobic001G540700 Sobic001G540700 Sobic009G254000--Sobic001G540700 Sobic003G224700 Sobic003G224700 Sobic009G254000--Sobic003G224700 Sobic002G006100 Sobic002G006100 Sobic009G254000--Sobic002G006100 Sobic004G250600 Sobic004G250600 Sobic009G254000--Sobic004G250600 Sobic005G013300 Sobic005G013300 Sobic009G254000--Sobic005G013300 Sobic004G014100 Sobic004G014100 Sobic006G140300--Sobic004G014100 Sobic006G140300--Sobic009G254000 Sobic010G180200 Sobic010G180200 Sobic006G140300--Sobic010G180200 Sobic003G217500 Sobic003G217500 Sobic006G140300--Sobic003G217500 Sobic007G023600 Sobic007G023600 Sobic006G140300--Sobic007G023600 Sobic006G066400 Sobic006G066400 Sobic006G140300--Sobic006G066400 Sobic006G200901 Sobic006G200901 Sobic006G140300--Sobic006G200901 Sobic001G423300 Sobic001G423300 Sobic006G140300--Sobic001G423300 Sobic006G140300--Sobic004G250600 Sobic007G197100--Sobic002G366000 Sobic007G197100--Sobic001G540700 Sobic007G197100--Sobic009G254000 Sobic005G032600 Sobic005G032600 Sobic007G197100--Sobic005G032600 Sobic009G005700 Sobic009G005700 Sobic007G197100--Sobic009G005700 Sobic002G315500 Sobic002G315500 Sobic007G197100--Sobic002G315500 Sobic004G207000 Sobic004G207000 Sobic007G197100--Sobic004G207000 Sobic001G470200 Sobic001G470200 Sobic007G197100--Sobic001G470200 Sobic006G272800 Sobic006G272800 Sobic007G197100--Sobic006G272800 Sobic003G298900--Sobic002G006100 Sobic003G298900--Sobic001G540700 Sobic001G123100 Sobic001G123100 Sobic003G298900--Sobic001G123100 Sobic003G298900--Sobic009G254000 Sobic003G298900--Sobic009G005700 Sobic005G064100 Sobic005G064100 Sobic003G298900--Sobic005G064100 Sobic002G253900 Sobic002G253900 Sobic003G298900--Sobic002G253900 Sobic003G411700 Sobic003G411700 Sobic003G298900--Sobic003G411700 Sobic003G298900--Sobic007G197100 Sobic002G366000--Sobic007G197100 Sobic002G366000--Sobic002G315500 Sobic002G366000--Sobic009G254000 Sobic002G366000--Sobic001G470200 Sobic002G366000--Sobic006G066400 Sobic001G093000 Sobic001G093000 Sobic002G366000--Sobic001G093000 Sobic002G366000--Sobic005G032600 Sobic001G468000 Sobic001G468000 Sobic002G366000--Sobic001G468000 Sobic002G366000--Sobic001G540700 Sobic002G284100 Sobic002G284100 Sobic001G540700--Sobic002G284100 Sobic001G540700--Sobic007G197100 Sobic001G540700--Sobic004G207000 Sobic004G267600 Sobic004G267600 Sobic001G540700--Sobic004G267600 Sobic004G315700 Sobic004G315700 Sobic001G540700--Sobic004G315700 Sobic001G540700--Sobic006G272800 Sobic001G487200 Sobic001G487200 Sobic001G540700--Sobic001G487200 Sobic001G369800 Sobic001G369800 Sobic001G540700--Sobic001G369800 Sobic003G345000 Sobic003G345000 Sobic001G540700--Sobic003G345000 Sobic003G224700--Sobic001G123100 Sobic004G145300 Sobic004G145300 Sobic003G224700--Sobic004G145300 Sobic003G224700--Sobic009G254000 Sobic001G123300 Sobic001G123300 Sobic003G224700--Sobic001G123300 Sobic007G106300 Sobic007G106300 Sobic003G224700--Sobic007G106300 Sobic002G343000 Sobic002G343000 Sobic003G224700--Sobic002G343000 Sobic003G224700--Sobic002G284100 Sobic003G224700--Sobic001G369800 Sobic003G224700--Sobic006G200901 Sobic002G027600 Sobic002G027600 Sobic002G006100--Sobic002G027600 Sobic003G259300 Sobic003G259300 Sobic002G006100--Sobic003G259300 Sobic002G006100--Sobic006G272800 Sobic003G351900 Sobic003G351900 Sobic002G006100--Sobic003G351900 Sobic001G425700 Sobic001G425700 Sobic002G006100--Sobic001G425700 Sobic002G006100--Sobic003G298900 Sobic002G006100--Sobic002G284100 Sobic004G078500 Sobic004G078500 Sobic002G006100--Sobic004G078500 Sobic009G225500 Sobic009G225500 Sobic002G006100--Sobic009G225500 Sobic004G250600--Sobic007G023600 Sobic006G261200 Sobic006G261200 Sobic004G250600--Sobic006G261200 Sobic004G250600--Sobic003G217500 Sobic001G170500 Sobic001G170500 Sobic004G250600--Sobic001G170500 Sobic003G304500 Sobic003G304500 Sobic004G250600--Sobic003G304500 Sobic006G186300 Sobic006G186300 Sobic004G250600--Sobic006G186300 Sobic008G179800 Sobic008G179800 Sobic004G250600--Sobic008G179800 Sobic010G207400 Sobic010G207400 Sobic004G250600--Sobic010G207400 Sobic009G025100 Sobic009G025100 Sobic004G250600--Sobic009G025100 Sobic005G013300--Sobic009G254000 Sobic005G013300--Sobic002G006100 Sobic005G013300--Sobic001G425700 Sobic001G395200 Sobic001G395200 Sobic005G013300--Sobic001G395200 Sobic005G013300--Sobic004G207000 Sobic005G013300--Sobic001G540700 Sobic005G013300--Sobic003G298900 Sobic009G257500 Sobic009G257500 Sobic005G013300--Sobic009G257500 Sobic009G167100 Sobic009G167100 Sobic005G013300--Sobic009G167100
Octagon: transcription factors


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