Gene annotation
Transcriptome id Sobic.004G250600.2,Sobic.004G250600.1
Synonym Sb04g029020
Functional annotation NHL repeat-containing protein, putative, expressed
UniProt C5XZD2 , A0A194YRG4
Pfam -
Panther DB PTHR13833 PTHR13833:SF52
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G70280 : NHL domain-containing protein
RAP-DB (Rice) LOC_Os02g49770.1 : NHL repeat-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a050427 , Zm00025a042684 , Zm00025a021910 , Zm00025a032639 , Zm00025a046991
Brachypodium KQK01613
Barley HORVU6Hr1G072950.9 , HORVU6Hr1G072950.8 , HORVU6Hr1G072950.3 , HORVU6Hr1G072950.2 , HORVU6Hr1G072950.1 , HORVU6Hr1G072950.7 , HORVU6Hr1G072950.6 , HORVU7Hr1G042740.14 , HORVU7Hr1G042740.12 , HORVU7Hr1G042740.13 , HORVU7Hr1G042740.10 , HORVU7Hr1G042740.11 , HORVU6Hr1G072950.13 , HORVU6Hr1G072950.12 , HORVU6Hr1G072950.11 , HORVU6Hr1G072950.10 , HORVU6Hr1G072950.14 , HORVU7Hr1G042740.4 , HORVU7Hr1G042740.5 , HORVU7Hr1G042740.6 , HORVU7Hr1G042740.7 , HORVU7Hr1G042740.1 , HORVU7Hr1G042740.2 , HORVU7Hr1G042740.3 , HORVU7Hr1G042740.8 , HORVU7Hr1G042740.9
Wheat TraesCS6B02G322100 , TraesCS7B02G116500 , TraesCS7A02G209600 , TraesCS7A02G209600 , TraesCS7A02G209600 , TraesCS6D02G272900 , TraesCS6D02G272900 , TraesCS6A02G291600 , TraesCS6A02G291600 , TraesCS7D02G211500
Populus -


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cDNA sequences
Sobic.004G250600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G023600 ATP binding protein, putative, expressed -
2 Sobic.006G261200 Trihelix Family(PubMedID : 24864043)@GL4(Ortholog in rice:Wu et al. (2017) )(PubMedID : 31659902)@transcription factor, putative, expressed -
3 Sobic.003G217500 expressed protein -
4 Sobic.001G170500 expressed protein -
5 Sobic.003G304500 expressed protein -
6 Sobic.006G186300 fasciclin-like arabinogalactan protein, putative, expressed -
7 Sobic.008G179800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GATA zinc finger domain containing protein, expressed -
8 Sobic.010G207400 protein kinase domain containing protein, expressed -
9 Sobic.009G025100 transporter, putative, expressed -
10 Sobic.003G402100 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed -
11 Sobic.008G156200 zinc finger family protein, putative, expressed K16277: E3 ubiquitin-protein ligase DRIP
12 Sobic.009G148000 anthranilate phosphoribosyltransferase, putative, expressed -
13 Sobic.007G182500 bZIP family transcription factor, putative, expressed -
14 Sobic.010G180200 transcription factor S-II, central domain containing protein, expressed -
15 Sobic.004G038900 expressed protein -
16 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
17 Sobic.004G196800 tetratricopeptide repeat containing protein, putative, expressed -
18 Sobic.010G118200 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
19 Sobic.004G274500 OsFBD8 - F-box and FBD domain containing protein, expressed -
20 Sobic.006G200901 - -


Gene co-expression network
sample Sobic004G250600 Sobic004G250600 Sobic007G023600 Sobic007G023600 Sobic004G250600--Sobic007G023600 Sobic006G261200 Sobic006G261200 Sobic004G250600--Sobic006G261200 Sobic003G217500 Sobic003G217500 Sobic004G250600--Sobic003G217500 Sobic001G170500 Sobic001G170500 Sobic004G250600--Sobic001G170500 Sobic003G304500 Sobic003G304500 Sobic004G250600--Sobic003G304500 Sobic006G186300 Sobic006G186300 Sobic004G250600--Sobic006G186300 Sobic008G179800 Sobic008G179800 Sobic004G250600--Sobic008G179800 Sobic010G207400 Sobic010G207400 Sobic004G250600--Sobic010G207400 Sobic009G025100 Sobic009G025100 Sobic004G250600--Sobic009G025100 Sobic009G253800 Sobic009G253800 Sobic007G023600--Sobic009G253800 Sobic007G023600--Sobic006G261200 Sobic003G402100 Sobic003G402100 Sobic007G023600--Sobic003G402100 Sobic004G190200 Sobic004G190200 Sobic007G023600--Sobic004G190200 Sobic010G118200 Sobic010G118200 Sobic007G023600--Sobic010G118200 Sobic007G023600--Sobic001G170500 Sobic007G091200 Sobic007G091200 Sobic007G023600--Sobic007G091200 Sobic007G023600--Sobic004G250600 Sobic004G294500 Sobic004G294500 Sobic007G023600--Sobic004G294500 Sobic006G261200--Sobic007G023600 Sobic006G261200--Sobic001G170500 Sobic009G168300 Sobic009G168300 Sobic006G261200--Sobic009G168300 Sobic006G261200--Sobic003G402100 Sobic006G261200--Sobic010G118200 Sobic006G261200--Sobic004G250600 Sobic009G017000 Sobic009G017000 Sobic006G261200--Sobic009G017000 Sobic006G261200--Sobic009G253800 Sobic001G068200 Sobic001G068200 Sobic006G261200--Sobic001G068200 Sobic003G217500--Sobic004G250600 Sobic006G200901 Sobic006G200901 Sobic003G217500--Sobic006G200901 Sobic004G014100 Sobic004G014100 Sobic003G217500--Sobic004G014100 Sobic002G343000 Sobic002G343000 Sobic003G217500--Sobic002G343000 Sobic009G148000 Sobic009G148000 Sobic003G217500--Sobic009G148000 Sobic006G140300 Sobic006G140300 Sobic003G217500--Sobic006G140300 Sobic004G196800 Sobic004G196800 Sobic003G217500--Sobic004G196800 Sobic003G217500--Sobic003G304500 Sobic003G217500--Sobic006G186300 Sobic001G170500--Sobic009G025100 Sobic009G007500 Sobic009G007500 Sobic001G170500--Sobic009G007500 Sobic008G088450 Sobic008G088450 Sobic001G170500--Sobic008G088450 Sobic001G170500--Sobic010G118200 Sobic001G170500--Sobic009G253800 Sobic009G227000 Sobic009G227000 Sobic001G170500--Sobic009G227000 Sobic001G170500--Sobic004G294500 Sobic003G024700 Sobic003G024700 Sobic001G170500--Sobic003G024700 Sobic001G518700 Sobic001G518700 Sobic001G170500--Sobic001G518700 Sobic003G304500--Sobic009G025100 Sobic009G033500 Sobic009G033500 Sobic003G304500--Sobic009G033500 Sobic003G304500--Sobic001G170500 Sobic004G274500 Sobic004G274500 Sobic003G304500--Sobic004G274500 Sobic003G304500--Sobic004G196800 Sobic004G155300 Sobic004G155300 Sobic003G304500--Sobic004G155300 Sobic004G318400 Sobic004G318400 Sobic003G304500--Sobic004G318400 Sobic010G037200 Sobic010G037200 Sobic003G304500--Sobic010G037200 Sobic003G304500--Sobic007G091200 Sobic010G047300 Sobic010G047300 Sobic006G186300--Sobic010G047300 Sobic007G041200 Sobic007G041200 Sobic006G186300--Sobic007G041200 Sobic002G122000 Sobic002G122000 Sobic006G186300--Sobic002G122000 Sobic004G075700 Sobic004G075700 Sobic006G186300--Sobic004G075700 Sobic002G230400 Sobic002G230400 Sobic006G186300--Sobic002G230400 Sobic010G084800 Sobic010G084800 Sobic006G186300--Sobic010G084800 Sobic001G305100 Sobic001G305100 Sobic006G186300--Sobic001G305100 Sobic005G131800 Sobic005G131800 Sobic006G186300--Sobic005G131800 Sobic005G171800 Sobic005G171800 Sobic006G186300--Sobic005G171800 Sobic008G179800--Sobic010G207400 Sobic008G179800--Sobic004G196800 Sobic008G179800--Sobic004G250600 Sobic008G179800--Sobic010G118200 Sobic008G179800--Sobic007G023600 Sobic008G179800--Sobic001G170500 Sobic008G156200 Sobic008G156200 Sobic008G179800--Sobic008G156200 Sobic008G179800--Sobic009G253800 Sobic004G038900 Sobic004G038900 Sobic008G179800--Sobic004G038900 Sobic010G207400--Sobic005G171800 Sobic004G294100 Sobic004G294100 Sobic010G207400--Sobic004G294100 Sobic010G207400--Sobic009G025100 Sobic003G230500 Sobic003G230500 Sobic010G207400--Sobic003G230500 Sobic010G227400 Sobic010G227400 Sobic010G207400--Sobic010G227400 Sobic010G168500 Sobic010G168500 Sobic010G207400--Sobic010G168500 Sobic009G077250 Sobic009G077250 Sobic010G207400--Sobic009G077250 Sobic008G039700 Sobic008G039700 Sobic010G207400--Sobic008G039700 Sobic001G158600 Sobic001G158600 Sobic010G207400--Sobic001G158600 Sobic009G025100--Sobic001G170500 Sobic009G025100--Sobic008G039700 Sobic009G025100--Sobic010G037200 Sobic009G025100--Sobic010G168500 Sobic008G081700 Sobic008G081700 Sobic009G025100--Sobic008G081700 Sobic009G071600 Sobic009G071600 Sobic009G025100--Sobic009G071600 Sobic009G025100--Sobic010G227400 Sobic009G025100--Sobic008G088450 Sobic002G338600 Sobic002G338600 Sobic009G025100--Sobic002G338600
Octagon: transcription factors


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