Gene annotation
Transcriptome id Sobic.010G118200.1
Synonym Sb10g010450, PI4KGAMMA7, ATPI4KGAMMA7, UBDKGAMMA7
Functional annotation phosphatidylinositol 3- and 4-kinase family protein, putative, expressed
UniProt C5Z8M3
Pfam PF00454
Panther DB PTHR15245 PTHR15245:SF21
NCBI CDD KOG2381; Phosphatidylinositol 4-kinase
KEGG Orthology -
Gene Ontology GO:0016773; phosphotransferase activity, alcohol group as acceptor


Orthologs (automatic annotation)
TAIR AT2G03890 : phosphoinositide 4-kinase gamma 7
RAP-DB (Rice) LOC_Os06g17290.1 : phosphatidylinositol 3- and 4-kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a050488 , Zm00025a047360
Brachypodium KQJ98762 , KQK18599
Barley HORVU7Hr1G043140.1 , HORVU7Hr1G043140.2
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.010G118200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G091200 wax synthase isoform 1, putative, expressed -
2 Sobic.006G104800 dnaJ domain containing protein, expressed -
3 Sobic.004G294100 ZOS2-14 - C2H2 zinc finger protein, expressed -
4 Sobic.001G425900 EDM2, putative, expressed -
5 Sobic.008G071900 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
6 Sobic.001G142600 OsFBX103 - F-box domain containing protein, expressed -
7 Sobic.009G168300 expressed protein -
8 Sobic.010G102900 protein of unknown function DUF1675 domain containing protein, expressed -
9 Sobic.001G170500 expressed protein -
10 Sobic.009G033500 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.004G171500 basic helix-loop-helix, putative, expressed -
12 Sobic.001G518700 DEF8 - Defensin and Defensin-like DEFL family, expressed -
13 Sobic.003G227800 cytochrome P450 72A1, putative, expressed -
14 Sobic.008G001700 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659911)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
15 Sobic.004G256400 glycosyltransferase, putative, expressed -
16 Sobic.010G060100 leucoanthocyanidin dioxygenase, putative, expressed -
17 Sobic.001G362900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 71D7, putative, expressed -
18 Sobic.004G085100 mitochondrial carrier protein, putative, expressed -
19 Sobic.005G001500 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659895)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
20 Sobic.005G056300 no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic010G118200 Sobic010G118200 Sobic007G091200 Sobic007G091200 Sobic010G118200--Sobic007G091200 Sobic006G104800 Sobic006G104800 Sobic010G118200--Sobic006G104800 Sobic004G294100 Sobic004G294100 Sobic010G118200--Sobic004G294100 Sobic001G425900 Sobic001G425900 Sobic010G118200--Sobic001G425900 Sobic008G071900 Sobic008G071900 Sobic010G118200--Sobic008G071900 Sobic001G142600 Sobic001G142600 Sobic010G118200--Sobic001G142600 Sobic009G168300 Sobic009G168300 Sobic010G118200--Sobic009G168300 Sobic010G102900 Sobic010G102900 Sobic010G118200--Sobic010G102900 Sobic001G170500 Sobic001G170500 Sobic010G118200--Sobic001G170500 Sobic009G033500 Sobic009G033500 Sobic007G091200--Sobic009G033500 Sobic001G518700 Sobic001G518700 Sobic007G091200--Sobic001G518700 Sobic009G007500 Sobic009G007500 Sobic007G091200--Sobic009G007500 Sobic004G294500 Sobic004G294500 Sobic007G091200--Sobic004G294500 Sobic003G189466 Sobic003G189466 Sobic007G091200--Sobic003G189466 Sobic008G081700 Sobic008G081700 Sobic007G091200--Sobic008G081700 Sobic008G088450 Sobic008G088450 Sobic007G091200--Sobic008G088450 Sobic007G091200--Sobic010G118200 Sobic009G253800 Sobic009G253800 Sobic007G091200--Sobic009G253800 Sobic003G135000 Sobic003G135000 Sobic006G104800--Sobic003G135000 Sobic006G080500 Sobic006G080500 Sobic006G104800--Sobic006G080500 Sobic002G381600 Sobic002G381600 Sobic006G104800--Sobic002G381600 Sobic006G104800--Sobic001G142600 Sobic005G056300 Sobic005G056300 Sobic006G104800--Sobic005G056300 Sobic001G392900 Sobic001G392900 Sobic006G104800--Sobic001G392900 Sobic002G053100 Sobic002G053100 Sobic006G104800--Sobic002G053100 Sobic001G158600 Sobic001G158600 Sobic006G104800--Sobic001G158600 Sobic001G129900 Sobic001G129900 Sobic006G104800--Sobic001G129900 Sobic004G099750 Sobic004G099750 Sobic004G294100--Sobic004G099750 Sobic001G175501 Sobic001G175501 Sobic004G294100--Sobic001G175501 Sobic006G178400 Sobic006G178400 Sobic004G294100--Sobic006G178400 Sobic004G294100--Sobic003G135000 Sobic004G294100--Sobic001G158600 Sobic001G253400 Sobic001G253400 Sobic004G294100--Sobic001G253400 Sobic005G193700 Sobic005G193700 Sobic004G294100--Sobic005G193700 Sobic004G139700 Sobic004G139700 Sobic004G294100--Sobic004G139700 Sobic004G294100--Sobic006G104800 Sobic001G425900--Sobic010G118200 Sobic006G271400 Sobic006G271400 Sobic001G425900--Sobic006G271400 Sobic001G425900--Sobic009G033500 Sobic010G058000 Sobic010G058000 Sobic001G425900--Sobic010G058000 Sobic002G101200 Sobic002G101200 Sobic001G425900--Sobic002G101200 Sobic002G166800 Sobic002G166800 Sobic001G425900--Sobic002G166800 Sobic010G209300 Sobic010G209300 Sobic001G425900--Sobic010G209300 Sobic006G031000 Sobic006G031000 Sobic001G425900--Sobic006G031000 Sobic001G425900--Sobic007G091200 Sobic008G071900--Sobic010G102900 Sobic004G171500 Sobic004G171500 Sobic008G071900--Sobic004G171500 Sobic008G001700 Sobic008G001700 Sobic008G071900--Sobic008G001700 Sobic003G227800 Sobic003G227800 Sobic008G071900--Sobic003G227800 Sobic001G362900 Sobic001G362900 Sobic008G071900--Sobic001G362900 Sobic008G071900--Sobic001G142600 Sobic009G021300 Sobic009G021300 Sobic008G071900--Sobic009G021300 Sobic004G085100 Sobic004G085100 Sobic008G071900--Sobic004G085100 Sobic005G001500 Sobic005G001500 Sobic008G071900--Sobic005G001500 Sobic001G142600--Sobic003G227800 Sobic001G142600--Sobic010G102900 Sobic001G142600--Sobic006G104800 Sobic003G063900 Sobic003G063900 Sobic001G142600--Sobic003G063900 Sobic001G142600--Sobic008G071900 Sobic001G142600--Sobic005G001500 Sobic001G142600--Sobic002G053100 Sobic002G408700 Sobic002G408700 Sobic001G142600--Sobic002G408700 Sobic001G142600--Sobic005G056300 Sobic009G168300--Sobic008G071900 Sobic009G168300--Sobic004G171500 Sobic009G168300--Sobic010G102900 Sobic009G168300--Sobic008G001700 Sobic009G168300--Sobic001G362900 Sobic009G168300--Sobic009G021300 Sobic009G168300--Sobic003G227800 Sobic009G168300--Sobic001G142600 Sobic009G168300--Sobic004G294100 Sobic010G102900--Sobic008G071900 Sobic010G102900--Sobic003G227800 Sobic010G102900--Sobic001G142600 Sobic010G102900--Sobic005G001500 Sobic010G102900--Sobic009G021300 Sobic010G102900--Sobic004G171500 Sobic010G102900--Sobic008G001700 Sobic010G102900--Sobic005G056300 Sobic010G102900--Sobic003G063900 Sobic009G025100 Sobic009G025100 Sobic001G170500--Sobic009G025100 Sobic001G170500--Sobic009G007500 Sobic001G170500--Sobic008G088450 Sobic001G170500--Sobic010G118200 Sobic001G170500--Sobic009G253800 Sobic009G227000 Sobic009G227000 Sobic001G170500--Sobic009G227000 Sobic001G170500--Sobic004G294500 Sobic003G024700 Sobic003G024700 Sobic001G170500--Sobic003G024700 Sobic001G170500--Sobic001G518700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.