Gene annotation
Transcriptome id Sobic.001G425900.1
Synonym EDM2
Functional annotation EDM2, putative, expressed
UniProt A0A1B6QP67
Pfam -
Panther DB PTHR22884 PTHR22884:SF340
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55390 : ENHANCED DOWNY MILDEW 2
RAP-DB (Rice) LOC_Os03g15990.1 : EDM2, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G118200 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
2 Sobic.006G271400 methyl-CpG binding domain containing protein, expressed -
3 Sobic.009G033500 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.010G058000 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
5 Sobic.002G101200 zinc finger, C3HC4 type domain containing protein, expressed K10638: UHRF1, E3 ubiquitin-protein ligase UHRF1
6 Sobic.002G166800 RNA recognition motif containing protein, putative, expressed -
7 Sobic.010G209300 expressed protein -
8 Sobic.006G031000 MYB family transcription factor, putative, expressed -
9 Sobic.007G091200 wax synthase isoform 1, putative, expressed -
10 Sobic.002G408700 OsFBX259 - F-box domain containing protein, expressed -
11 Sobic.005G090500 - -
12 Sobic.006G104800 dnaJ domain containing protein, expressed -
13 Sobic.003G307600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
14 Sobic.005G075000 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.001G142600 OsFBX103 - F-box domain containing protein, expressed -
16 Sobic.002G267700 bZIP family transcription factor, putative, expressed -
17 Sobic.002G053100 RNA recognition motif containing protein, expressed -
18 Sobic.005G001500 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659895)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
19 Sobic.005G032500 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
20 Sobic.007G122932 - -


Gene co-expression network
sample Sobic001G425900 Sobic001G425900 Sobic010G118200 Sobic010G118200 Sobic001G425900--Sobic010G118200 Sobic006G271400 Sobic006G271400 Sobic001G425900--Sobic006G271400 Sobic009G033500 Sobic009G033500 Sobic001G425900--Sobic009G033500 Sobic010G058000 Sobic010G058000 Sobic001G425900--Sobic010G058000 Sobic002G101200 Sobic002G101200 Sobic001G425900--Sobic002G101200 Sobic002G166800 Sobic002G166800 Sobic001G425900--Sobic002G166800 Sobic010G209300 Sobic010G209300 Sobic001G425900--Sobic010G209300 Sobic006G031000 Sobic006G031000 Sobic001G425900--Sobic006G031000 Sobic007G091200 Sobic007G091200 Sobic001G425900--Sobic007G091200 Sobic010G118200--Sobic007G091200 Sobic006G104800 Sobic006G104800 Sobic010G118200--Sobic006G104800 Sobic004G294100 Sobic004G294100 Sobic010G118200--Sobic004G294100 Sobic010G118200--Sobic001G425900 Sobic008G071900 Sobic008G071900 Sobic010G118200--Sobic008G071900 Sobic001G142600 Sobic001G142600 Sobic010G118200--Sobic001G142600 Sobic009G168300 Sobic009G168300 Sobic010G118200--Sobic009G168300 Sobic010G102900 Sobic010G102900 Sobic010G118200--Sobic010G102900 Sobic001G170500 Sobic001G170500 Sobic010G118200--Sobic001G170500 Sobic005G075000 Sobic005G075000 Sobic006G271400--Sobic005G075000 Sobic006G271400--Sobic010G209300 Sobic005G090500 Sobic005G090500 Sobic006G271400--Sobic005G090500 Sobic006G271400--Sobic006G031000 Sobic006G271400--Sobic010G058000 Sobic005G074900 Sobic005G074900 Sobic006G271400--Sobic005G074900 Sobic002G408700 Sobic002G408700 Sobic006G271400--Sobic002G408700 Sobic002G053100 Sobic002G053100 Sobic006G271400--Sobic002G053100 Sobic003G363300 Sobic003G363300 Sobic006G271400--Sobic003G363300 Sobic009G033500--Sobic007G091200 Sobic007G041200 Sobic007G041200 Sobic009G033500--Sobic007G041200 Sobic010G060100 Sobic010G060100 Sobic009G033500--Sobic010G060100 Sobic009G033500--Sobic001G425900 Sobic009G033500--Sobic010G118200 Sobic010G084800 Sobic010G084800 Sobic009G033500--Sobic010G084800 Sobic007G205400 Sobic007G205400 Sobic009G033500--Sobic007G205400 Sobic004G133600 Sobic004G133600 Sobic009G033500--Sobic004G133600 Sobic001G518700 Sobic001G518700 Sobic009G033500--Sobic001G518700 Sobic010G058000--Sobic010G209300 Sobic010G058000--Sobic006G271400 Sobic010G058000--Sobic006G031000 Sobic010G058000--Sobic002G408700 Sobic010G058000--Sobic001G142600 Sobic010G058000--Sobic005G090500 Sobic003G291100 Sobic003G291100 Sobic010G058000--Sobic003G291100 Sobic010G058000--Sobic002G053100 Sobic010G058000--Sobic002G166800 Sobic002G217000 Sobic002G217000 Sobic002G101200--Sobic002G217000 Sobic005G032500 Sobic005G032500 Sobic002G101200--Sobic005G032500 Sobic002G058900 Sobic002G058900 Sobic002G101200--Sobic002G058900 Sobic007G037200 Sobic007G037200 Sobic002G101200--Sobic007G037200 Sobic002G101200--Sobic002G166800 Sobic002G100000 Sobic002G100000 Sobic002G101200--Sobic002G100000 Sobic003G225800 Sobic003G225800 Sobic002G101200--Sobic003G225800 Sobic002G101200--Sobic006G031000 Sobic009G051201 Sobic009G051201 Sobic002G101200--Sobic009G051201 Sobic002G166800--Sobic005G032500 Sobic002G166800--Sobic006G031000 Sobic002G166800--Sobic002G100000 Sobic002G166800--Sobic002G101200 Sobic002G166800--Sobic002G217000 Sobic002G166800--Sobic007G037200 Sobic005G089101 Sobic005G089101 Sobic002G166800--Sobic005G089101 Sobic010G181900 Sobic010G181900 Sobic002G166800--Sobic010G181900 Sobic001G392900 Sobic001G392900 Sobic002G166800--Sobic001G392900 Sobic010G209300--Sobic002G408700 Sobic007G122932 Sobic007G122932 Sobic010G209300--Sobic007G122932 Sobic009G021300 Sobic009G021300 Sobic010G209300--Sobic009G021300 Sobic010G209300--Sobic003G291100 Sobic005G001500 Sobic005G001500 Sobic010G209300--Sobic005G001500 Sobic010G209300--Sobic006G271400 Sobic010G209300--Sobic001G142600 Sobic007G147300 Sobic007G147300 Sobic010G209300--Sobic007G147300 Sobic010G209300--Sobic010G058000 Sobic006G031000--Sobic002G166800 Sobic010G010300 Sobic010G010300 Sobic006G031000--Sobic010G010300 Sobic006G117300 Sobic006G117300 Sobic006G031000--Sobic006G117300 Sobic006G031000--Sobic002G101200 Sobic002G267700 Sobic002G267700 Sobic006G031000--Sobic002G267700 Sobic009G139500 Sobic009G139500 Sobic006G031000--Sobic009G139500 Sobic006G031000--Sobic005G032500 Sobic006G031000--Sobic001G392900 Sobic006G031000--Sobic002G053100 Sobic007G091200--Sobic009G033500 Sobic007G091200--Sobic001G518700 Sobic009G007500 Sobic009G007500 Sobic007G091200--Sobic009G007500 Sobic004G294500 Sobic004G294500 Sobic007G091200--Sobic004G294500 Sobic003G189466 Sobic003G189466 Sobic007G091200--Sobic003G189466 Sobic008G081700 Sobic008G081700 Sobic007G091200--Sobic008G081700 Sobic008G088450 Sobic008G088450 Sobic007G091200--Sobic008G088450 Sobic007G091200--Sobic010G118200 Sobic009G253800 Sobic009G253800 Sobic007G091200--Sobic009G253800
Octagon: transcription factors


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