Gene annotation
Transcriptome id Sobic.005G090500.1
Synonym
Functional annotation -
UniProt A0A1B6PR46
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G090500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G074800 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.005G148600 - -
3 Sobic.002G053100 RNA recognition motif containing protein, expressed -
4 Sobic.004G196200 cytochrome P450, putative, expressed K12639: CYP724B1, cytochrome P450 family 724 subfamily B polypeptide 1
5 Sobic.006G271400 methyl-CpG binding domain containing protein, expressed -
6 Sobic.004G171500 basic helix-loop-helix, putative, expressed -
7 Sobic.006G064700 expressed protein -
8 Sobic.008G001700 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659911)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
9 Sobic.005G074900 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.001G362900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 71D7, putative, expressed -
11 Sobic.001G142600 OsFBX103 - F-box domain containing protein, expressed -
12 Sobic.002G417900 nucleotidyltransferase, putative, expressed -
13 Sobic.006G104800 dnaJ domain containing protein, expressed -
14 Sobic.008G071900 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
15 Sobic.004G085100 mitochondrial carrier protein, putative, expressed -
16 Sobic.009G039900 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
17 Sobic.010G209300 expressed protein -
18 Sobic.009G039100 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
19 Sobic.006G117300 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
20 Sobic.004G116200 expressed protein -


Gene co-expression network
sample Sobic005G090500 Sobic005G090500 Sobic005G074800 Sobic005G074800 Sobic005G090500--Sobic005G074800 Sobic005G148600 Sobic005G148600 Sobic005G090500--Sobic005G148600 Sobic002G053100 Sobic002G053100 Sobic005G090500--Sobic002G053100 Sobic004G196200 Sobic004G196200 Sobic005G090500--Sobic004G196200 Sobic006G271400 Sobic006G271400 Sobic005G090500--Sobic006G271400 Sobic004G171500 Sobic004G171500 Sobic005G090500--Sobic004G171500 Sobic006G064700 Sobic006G064700 Sobic005G090500--Sobic006G064700 Sobic008G001700 Sobic008G001700 Sobic005G090500--Sobic008G001700 Sobic005G074900 Sobic005G074900 Sobic005G090500--Sobic005G074900 Sobic005G074800--Sobic005G148600 Sobic005G074800--Sobic004G196200 Sobic005G074800--Sobic005G090500 Sobic010G034900 Sobic010G034900 Sobic005G074800--Sobic010G034900 Sobic002G345400 Sobic002G345400 Sobic005G074800--Sobic002G345400 Sobic005G102451 Sobic005G102451 Sobic005G074800--Sobic005G102451 Sobic010G219300 Sobic010G219300 Sobic005G074800--Sobic010G219300 Sobic005G056100 Sobic005G056100 Sobic005G074800--Sobic005G056100 Sobic008G064000 Sobic008G064000 Sobic005G074800--Sobic008G064000 Sobic005G148600--Sobic004G196200 Sobic005G148600--Sobic005G074800 Sobic005G148600--Sobic005G090500 Sobic009G039900 Sobic009G039900 Sobic005G148600--Sobic009G039900 Sobic005G148600--Sobic006G064700 Sobic005G153400 Sobic005G153400 Sobic005G148600--Sobic005G153400 Sobic009G039100 Sobic009G039100 Sobic005G148600--Sobic009G039100 Sobic007G082900 Sobic007G082900 Sobic005G148600--Sobic007G082900 Sobic005G148600--Sobic005G074900 Sobic006G104800 Sobic006G104800 Sobic002G053100--Sobic006G104800 Sobic001G142600 Sobic001G142600 Sobic002G053100--Sobic001G142600 Sobic001G392900 Sobic001G392900 Sobic002G053100--Sobic001G392900 Sobic003G063900 Sobic003G063900 Sobic002G053100--Sobic003G063900 Sobic002G053100--Sobic005G090500 Sobic010G102900 Sobic010G102900 Sobic002G053100--Sobic010G102900 Sobic003G227800 Sobic003G227800 Sobic002G053100--Sobic003G227800 Sobic008G071900 Sobic008G071900 Sobic002G053100--Sobic008G071900 Sobic008G168400 Sobic008G168400 Sobic002G053100--Sobic008G168400 Sobic004G196200--Sobic005G148600 Sobic004G196200--Sobic005G074800 Sobic004G196200--Sobic007G082900 Sobic004G196200--Sobic010G219300 Sobic004G196200--Sobic009G039900 Sobic004G196200--Sobic005G090500 Sobic004G196200--Sobic005G153400 Sobic004G196200--Sobic010G034900 Sobic004G196200--Sobic005G074900 Sobic005G075000 Sobic005G075000 Sobic006G271400--Sobic005G075000 Sobic010G209300 Sobic010G209300 Sobic006G271400--Sobic010G209300 Sobic006G271400--Sobic005G090500 Sobic006G031000 Sobic006G031000 Sobic006G271400--Sobic006G031000 Sobic010G058000 Sobic010G058000 Sobic006G271400--Sobic010G058000 Sobic006G271400--Sobic005G074900 Sobic002G408700 Sobic002G408700 Sobic006G271400--Sobic002G408700 Sobic006G271400--Sobic002G053100 Sobic003G363300 Sobic003G363300 Sobic006G271400--Sobic003G363300 Sobic001G362900 Sobic001G362900 Sobic004G171500--Sobic001G362900 Sobic004G171500--Sobic008G071900 Sobic004G171500--Sobic008G001700 Sobic004G085100 Sobic004G085100 Sobic004G171500--Sobic004G085100 Sobic004G116200 Sobic004G116200 Sobic004G171500--Sobic004G116200 Sobic004G171500--Sobic010G102900 Sobic002G088000 Sobic002G088000 Sobic004G171500--Sobic002G088000 Sobic002G417900 Sobic002G417900 Sobic004G171500--Sobic002G417900 Sobic009G116500 Sobic009G116500 Sobic004G171500--Sobic009G116500 Sobic006G064700--Sobic009G039100 Sobic006G064700--Sobic009G039900 Sobic006G064700--Sobic002G345400 Sobic001G328900 Sobic001G328900 Sobic006G064700--Sobic001G328900 Sobic006G064700--Sobic005G102451 Sobic003G303500 Sobic003G303500 Sobic006G064700--Sobic003G303500 Sobic006G064700--Sobic005G153400 Sobic006G064700--Sobic005G148600 Sobic010G195600 Sobic010G195600 Sobic006G064700--Sobic010G195600 Sobic008G001700--Sobic004G171500 Sobic008G001700--Sobic008G071900 Sobic008G001700--Sobic001G362900 Sobic008G001700--Sobic004G116200 Sobic009G021300 Sobic009G021300 Sobic008G001700--Sobic009G021300 Sobic008G001700--Sobic004G085100 Sobic008G001700--Sobic010G102900 Sobic007G147300 Sobic007G147300 Sobic008G001700--Sobic007G147300 Sobic008G001700--Sobic002G088000 Sobic006G036201 Sobic006G036201 Sobic005G074900--Sobic006G036201 Sobic009G051301 Sobic009G051301 Sobic005G074900--Sobic009G051301 Sobic005G074900--Sobic005G148600 Sobic005G074900--Sobic004G196200 Sobic005G074900--Sobic005G090500 Sobic005G074900--Sobic006G271400 Sobic005G074900--Sobic005G074800 Sobic009G086800 Sobic009G086800 Sobic005G074900--Sobic009G086800 Sobic006G279000 Sobic006G279000 Sobic005G074900--Sobic006G279000
Octagon: transcription factors


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