Gene annotation
Transcriptome id Sobic.001G362900.1
Synonym Sb01g034650, CYP71B2
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cytochrome P450 71D7, putative, expressed
UniProt C5WYS8
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF58
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT3G26280 : cytochrome P450, family 71, subfamily B, polypeptide 4
RAP-DB (Rice) LOC_Os10g30380.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a017741 , Zm00025a002573 , Zm00025a029392 , Zm00025a017717
Brachypodium KQJ96861
Barley HORVU5Hr1G013880.4 , HORVU5Hr1G013880.3 , HORVU3Hr1G015130.3 , HORVU3Hr1G015130.2 , HORVU3Hr1G015130.1 , HORVU5Hr1G013990.1 , HORVU5Hr1G013990.3 , HORVU5Hr1G013990.2 , HORVU2Hr1G094630.4 , HORVU2Hr1G094630.2 , HORVU2Hr1G094630.3 , HORVU2Hr1G012810.1 , HORVU2Hr1G012810.2 , HORVU2Hr1G012810.3 , HORVU2Hr1G012810.4 , HORVU2Hr1G012810.5 , HORVU5Hr1G013880.6 , HORVU5Hr1G013880.5 , HORVU5Hr1G013880.2 , HORVU5Hr1G013880.1
Wheat TraesCS5D02G067700 , TraesCS3B02G099900 , TraesCS3B02G099900 , TraesCS3B02G099900 , TraesCS5B02G060200 , TraesCS2A02G398800 , TraesCS5A02G056600 , TraesCS5B02G060300 , TraesCS2A02G076500 , TraesCS5A02G056500 , TraesCS5D02G067800 , TraesCS1D02G241900 , TraesCS2A02G398800 , TraesCS3A02G084800 , TraesCS1A02G242000 , TraesCS2D02G396300 , TraesCS2D02G396300 , TraesCS3D02G084600 , TraesCS2B02G091500
Populus -


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cDNA sequences
Sobic.001G362900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G085100 mitochondrial carrier protein, putative, expressed -
2 Sobic.004G171500 basic helix-loop-helix, putative, expressed -
3 Sobic.002G088000 cytokinin-N-glucosyltransferase 1, putative, expressed -
4 Sobic.008G001700 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659911)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
5 Sobic.008G071900 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
6 Sobic.004G116200 expressed protein -
7 Sobic.002G417900 nucleotidyltransferase, putative, expressed -
8 Sobic.009G116500 esterase, putative, expressed -
9 Sobic.001G297800 expressed protein -
10 Sobic.007G034900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.003G156100 OsFBX117 - F-box domain containing protein, expressed -
12 Sobic.010G102900 protein of unknown function DUF1675 domain containing protein, expressed -
13 Sobic.005G188000 no apical meristem protein, putative, expressed -
14 Sobic.001G037800 cinnamoyl CoA reductase, putative, expressed -
15 Sobic.008G176600 expressed protein -
16 Sobic.002G089400 DEF8 - Defensin and Defensin-like DEFL family, expressed -
17 Sobic.008G064000 LTPL36 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.002G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@"BG2(Ortholog in rice:Xu et al., 2015)"(PubMedID : 31659863)@cytochrome P450, putative, expressed -
19 Sobic.002G028100 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.001G535900 aquaporin protein, putative, expressed K09873: aquaporin TIP


Gene co-expression network
sample Sobic001G362900 Sobic001G362900 Sobic004G085100 Sobic004G085100 Sobic001G362900--Sobic004G085100 Sobic004G171500 Sobic004G171500 Sobic001G362900--Sobic004G171500 Sobic002G088000 Sobic002G088000 Sobic001G362900--Sobic002G088000 Sobic008G001700 Sobic008G001700 Sobic001G362900--Sobic008G001700 Sobic008G071900 Sobic008G071900 Sobic001G362900--Sobic008G071900 Sobic004G116200 Sobic004G116200 Sobic001G362900--Sobic004G116200 Sobic002G417900 Sobic002G417900 Sobic001G362900--Sobic002G417900 Sobic009G116500 Sobic009G116500 Sobic001G362900--Sobic009G116500 Sobic001G297800 Sobic001G297800 Sobic001G362900--Sobic001G297800 Sobic004G085100--Sobic001G362900 Sobic004G085100--Sobic002G088000 Sobic004G085100--Sobic004G171500 Sobic004G085100--Sobic004G116200 Sobic004G085100--Sobic002G417900 Sobic004G085100--Sobic008G001700 Sobic004G085100--Sobic008G071900 Sobic005G188000 Sobic005G188000 Sobic004G085100--Sobic005G188000 Sobic003G156100 Sobic003G156100 Sobic004G085100--Sobic003G156100 Sobic004G171500--Sobic001G362900 Sobic004G171500--Sobic008G071900 Sobic004G171500--Sobic008G001700 Sobic004G171500--Sobic004G085100 Sobic004G171500--Sobic004G116200 Sobic010G102900 Sobic010G102900 Sobic004G171500--Sobic010G102900 Sobic004G171500--Sobic002G088000 Sobic004G171500--Sobic002G417900 Sobic004G171500--Sobic009G116500 Sobic002G088000--Sobic004G085100 Sobic002G088000--Sobic001G362900 Sobic002G088000--Sobic004G116200 Sobic002G088000--Sobic005G188000 Sobic002G088000--Sobic004G171500 Sobic002G088000--Sobic008G001700 Sobic003G350900 Sobic003G350900 Sobic002G088000--Sobic003G350900 Sobic002G088000--Sobic002G417900 Sobic002G088000--Sobic003G156100 Sobic008G001700--Sobic004G171500 Sobic008G001700--Sobic008G071900 Sobic008G001700--Sobic001G362900 Sobic008G001700--Sobic004G116200 Sobic009G021300 Sobic009G021300 Sobic008G001700--Sobic009G021300 Sobic008G001700--Sobic004G085100 Sobic008G001700--Sobic010G102900 Sobic007G147300 Sobic007G147300 Sobic008G001700--Sobic007G147300 Sobic008G001700--Sobic002G088000 Sobic008G071900--Sobic010G102900 Sobic008G071900--Sobic004G171500 Sobic008G071900--Sobic008G001700 Sobic003G227800 Sobic003G227800 Sobic008G071900--Sobic003G227800 Sobic008G071900--Sobic001G362900 Sobic001G142600 Sobic001G142600 Sobic008G071900--Sobic001G142600 Sobic008G071900--Sobic009G021300 Sobic008G071900--Sobic004G085100 Sobic005G001500 Sobic005G001500 Sobic008G071900--Sobic005G001500 Sobic004G116200--Sobic002G088000 Sobic004G116200--Sobic008G001700 Sobic004G116200--Sobic001G362900 Sobic004G116200--Sobic004G085100 Sobic004G116200--Sobic004G171500 Sobic004G116200--Sobic005G188000 Sobic009G086800 Sobic009G086800 Sobic004G116200--Sobic009G086800 Sobic004G116200--Sobic008G071900 Sobic004G116200--Sobic003G350900 Sobic002G417900--Sobic001G362900 Sobic002G417900--Sobic004G085100 Sobic002G417900--Sobic009G116500 Sobic002G417900--Sobic001G297800 Sobic002G417900--Sobic003G156100 Sobic002G417900--Sobic004G171500 Sobic002G089400 Sobic002G089400 Sobic002G417900--Sobic002G089400 Sobic008G176600 Sobic008G176600 Sobic002G417900--Sobic008G176600 Sobic002G417900--Sobic002G088000 Sobic007G034900 Sobic007G034900 Sobic009G116500--Sobic007G034900 Sobic009G116500--Sobic002G089400 Sobic002G338600 Sobic002G338600 Sobic009G116500--Sobic002G338600 Sobic004G261000 Sobic004G261000 Sobic009G116500--Sobic004G261000 Sobic010G200200 Sobic010G200200 Sobic009G116500--Sobic010G200200 Sobic007G205100 Sobic007G205100 Sobic009G116500--Sobic007G205100 Sobic009G116500--Sobic001G297800 Sobic008G081700 Sobic008G081700 Sobic009G116500--Sobic008G081700 Sobic001G259250 Sobic001G259250 Sobic009G116500--Sobic001G259250 Sobic002G367600 Sobic002G367600 Sobic001G297800--Sobic002G367600 Sobic001G535900 Sobic001G535900 Sobic001G297800--Sobic001G535900 Sobic002G028100 Sobic002G028100 Sobic001G297800--Sobic002G028100 Sobic002G211700 Sobic002G211700 Sobic001G297800--Sobic002G211700 Sobic001G297800--Sobic002G089400 Sobic009G001600 Sobic009G001600 Sobic001G297800--Sobic009G001600 Sobic003G247700 Sobic003G247700 Sobic001G297800--Sobic003G247700 Sobic001G297800--Sobic009G116500 Sobic006G018400 Sobic006G018400 Sobic001G297800--Sobic006G018400
Octagon: transcription factors


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