Gene annotation
Transcriptome id Sobic.001G037800.2
Synonym Sb01g003470
Functional annotation cinnamoyl CoA reductase, putative, expressed
UniProt A0A1B6QH96
Pfam PF01370
Panther DB PTHR10366 PTHR10366:SF369
NCBI CDD KOG1502; Flavonol reductase/cinnamoyl-CoA reductase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT5G58490 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os03g60380.1 : cinnamoyl CoA reductase, putative, expressed
MaizeGDB (Corn) Zm00025a016448 , Zm00025a016447
Brachypodium KQK12465
Barley HORVU5Hr1G112340.1 , HORVU5Hr1G112340.2 , HORVU5Hr1G112340.6 , HORVU5Hr1G112340.7 , HORVU5Hr1G112340.9
Wheat TraesCS5D02G486300 , TraesCS5D02G486300 , TraesCS5A02G473600 , TraesCS5B02G486500 , TraesCS5A02G473600
Populus -


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cDNA sequences
Sobic.001G037800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G116500 esterase, putative, expressed -
2 Sobic.001G297800 expressed protein -
3 Sobic.002G028100 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.002G089400 DEF8 - Defensin and Defensin-like DEFL family, expressed -
5 Sobic.007G034900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.002G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@"BG2(Ortholog in rice:Xu et al., 2015)"(PubMedID : 31659863)@cytochrome P450, putative, expressed -
7 Sobic.002G338600 expressed protein -
8 Sobic.010G200200 AP2 domain containing protein, expressed -
9 Sobic.007G205100 AP2 domain containing protein, expressed -
10 Sobic.004G142000 - -
11 Sobic.008G081700 - -
12 Sobic.006G018400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
13 Sobic.001G535900 aquaporin protein, putative, expressed K09873: aquaporin TIP
14 Sobic.010G200400 AP2 domain containing protein, expressed -
15 Sobic.001G259250 - -
16 Sobic.005G153200 - -
17 Sobic.001G362900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 71D7, putative, expressed -
18 Sobic.004G261000 expressed protein -
19 Sobic.002G211700 storage protein(PubMedID : 16668596)@"kafirin seed storage protein, delta-kafirin precursor"(PubMedID : 21853065)@PROLM23 - Prolamin precursor, expressed -
20 Sobic.004G085100 mitochondrial carrier protein, putative, expressed -


Gene co-expression network
sample Sobic001G037800 Sobic001G037800 Sobic009G116500 Sobic009G116500 Sobic001G037800--Sobic009G116500 Sobic001G297800 Sobic001G297800 Sobic001G037800--Sobic001G297800 Sobic002G028100 Sobic002G028100 Sobic001G037800--Sobic002G028100 Sobic002G089400 Sobic002G089400 Sobic001G037800--Sobic002G089400 Sobic007G034900 Sobic007G034900 Sobic001G037800--Sobic007G034900 Sobic002G367600 Sobic002G367600 Sobic001G037800--Sobic002G367600 Sobic002G338600 Sobic002G338600 Sobic001G037800--Sobic002G338600 Sobic010G200200 Sobic010G200200 Sobic001G037800--Sobic010G200200 Sobic007G205100 Sobic007G205100 Sobic001G037800--Sobic007G205100 Sobic009G116500--Sobic007G034900 Sobic009G116500--Sobic002G089400 Sobic009G116500--Sobic002G338600 Sobic004G261000 Sobic004G261000 Sobic009G116500--Sobic004G261000 Sobic009G116500--Sobic010G200200 Sobic009G116500--Sobic007G205100 Sobic009G116500--Sobic001G297800 Sobic008G081700 Sobic008G081700 Sobic009G116500--Sobic008G081700 Sobic001G259250 Sobic001G259250 Sobic009G116500--Sobic001G259250 Sobic001G297800--Sobic002G367600 Sobic001G535900 Sobic001G535900 Sobic001G297800--Sobic001G535900 Sobic001G297800--Sobic002G028100 Sobic002G211700 Sobic002G211700 Sobic001G297800--Sobic002G211700 Sobic001G297800--Sobic002G089400 Sobic009G001600 Sobic009G001600 Sobic001G297800--Sobic009G001600 Sobic003G247700 Sobic003G247700 Sobic001G297800--Sobic003G247700 Sobic001G297800--Sobic009G116500 Sobic006G018400 Sobic006G018400 Sobic001G297800--Sobic006G018400 Sobic002G028100--Sobic002G367600 Sobic002G028100--Sobic001G297800 Sobic002G028100--Sobic002G338600 Sobic002G028100--Sobic007G205100 Sobic002G028100--Sobic002G089400 Sobic002G028100--Sobic001G535900 Sobic010G200400 Sobic010G200400 Sobic002G028100--Sobic010G200400 Sobic002G028100--Sobic009G001600 Sobic002G028100--Sobic010G200200 Sobic002G089400--Sobic010G200400 Sobic002G089400--Sobic007G205100 Sobic002G089400--Sobic002G028100 Sobic002G089400--Sobic002G338600 Sobic007G025300 Sobic007G025300 Sobic002G089400--Sobic007G025300 Sobic002G089400--Sobic001G297800 Sobic002G089400--Sobic002G367600 Sobic002G089400--Sobic009G116500 Sobic002G089400--Sobic001G535900 Sobic007G034900--Sobic004G261000 Sobic007G034900--Sobic009G116500 Sobic005G153200 Sobic005G153200 Sobic007G034900--Sobic005G153200 Sobic007G034900--Sobic001G259250 Sobic004G142000 Sobic004G142000 Sobic007G034900--Sobic004G142000 Sobic006G051750 Sobic006G051750 Sobic007G034900--Sobic006G051750 Sobic001G158600 Sobic001G158600 Sobic007G034900--Sobic001G158600 Sobic007G034900--Sobic010G200200 Sobic005G193700 Sobic005G193700 Sobic007G034900--Sobic005G193700 Sobic002G367600--Sobic002G028100 Sobic002G367600--Sobic001G535900 Sobic002G367600--Sobic001G297800 Sobic002G367600--Sobic002G211700 Sobic002G367600--Sobic009G001600 Sobic002G367600--Sobic003G247700 Sobic002G367600--Sobic002G089400 Sobic008G103066 Sobic008G103066 Sobic002G367600--Sobic008G103066 Sobic002G367600--Sobic007G025300 Sobic002G338600--Sobic007G205100 Sobic002G338600--Sobic010G200200 Sobic002G338600--Sobic008G081700 Sobic002G338600--Sobic010G200400 Sobic002G338600--Sobic002G028100 Sobic002G338600--Sobic001G259250 Sobic002G338600--Sobic005G153200 Sobic002G338600--Sobic004G142000 Sobic002G338600--Sobic002G089400 Sobic010G200200--Sobic001G259250 Sobic010G200200--Sobic005G153200 Sobic010G200200--Sobic004G142000 Sobic010G200200--Sobic002G338600 Sobic010G200200--Sobic007G205100 Sobic010G200200--Sobic008G081700 Sobic010G200200--Sobic002G028100 Sobic010G200200--Sobic006G051750 Sobic010G200200--Sobic010G200400 Sobic007G205100--Sobic010G200400 Sobic007G205100--Sobic002G338600 Sobic007G205100--Sobic002G089400 Sobic007G205100--Sobic002G028100 Sobic007G205100--Sobic010G200200 Sobic007G205100--Sobic008G081700 Sobic007G205100--Sobic002G367600 Sobic007G205100--Sobic007G025300 Sobic007G205100--Sobic001G259250
Octagon: transcription factors


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