Gene annotation
Transcriptome id Sobic.009G168300.1
Synonym Sb09g022990
Functional annotation expressed protein
UniProt C5YZD8
Pfam PF07762
Panther DB PTHR33086 PTHR33086:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g16000.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G168300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G071900 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
2 Sobic.004G171500 basic helix-loop-helix, putative, expressed -
3 Sobic.010G102900 protein of unknown function DUF1675 domain containing protein, expressed -
4 Sobic.008G001700 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659911)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
5 Sobic.001G362900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 71D7, putative, expressed -
6 Sobic.009G021300 Jacalin-like lectin domain containing protein, putative, expressed -
7 Sobic.003G227800 cytochrome P450 72A1, putative, expressed -
8 Sobic.001G142600 OsFBX103 - F-box domain containing protein, expressed -
9 Sobic.004G294100 ZOS2-14 - C2H2 zinc finger protein, expressed -
10 Sobic.004G085100 mitochondrial carrier protein, putative, expressed -
11 Sobic.004G116200 expressed protein -
12 Sobic.005G001500 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659895)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
13 Sobic.004G256400 glycosyltransferase, putative, expressed -
14 Sobic.002G417900 nucleotidyltransferase, putative, expressed -
15 Sobic.002G088000 cytokinin-N-glucosyltransferase 1, putative, expressed -
16 Sobic.007G034900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed -
17 Sobic.002G408700 OsFBX259 - F-box domain containing protein, expressed -
18 Sobic.003G063900 - -
19 Sobic.005G056300 no apical meristem protein, putative, expressed -
20 Sobic.007G147300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor


Gene co-expression network
sample Sobic009G168300 Sobic009G168300 Sobic008G071900 Sobic008G071900 Sobic009G168300--Sobic008G071900 Sobic004G171500 Sobic004G171500 Sobic009G168300--Sobic004G171500 Sobic010G102900 Sobic010G102900 Sobic009G168300--Sobic010G102900 Sobic008G001700 Sobic008G001700 Sobic009G168300--Sobic008G001700 Sobic001G362900 Sobic001G362900 Sobic009G168300--Sobic001G362900 Sobic009G021300 Sobic009G021300 Sobic009G168300--Sobic009G021300 Sobic003G227800 Sobic003G227800 Sobic009G168300--Sobic003G227800 Sobic001G142600 Sobic001G142600 Sobic009G168300--Sobic001G142600 Sobic004G294100 Sobic004G294100 Sobic009G168300--Sobic004G294100 Sobic008G071900--Sobic010G102900 Sobic008G071900--Sobic004G171500 Sobic008G071900--Sobic008G001700 Sobic008G071900--Sobic003G227800 Sobic008G071900--Sobic001G362900 Sobic008G071900--Sobic001G142600 Sobic008G071900--Sobic009G021300 Sobic004G085100 Sobic004G085100 Sobic008G071900--Sobic004G085100 Sobic005G001500 Sobic005G001500 Sobic008G071900--Sobic005G001500 Sobic004G171500--Sobic001G362900 Sobic004G171500--Sobic008G071900 Sobic004G171500--Sobic008G001700 Sobic004G171500--Sobic004G085100 Sobic004G116200 Sobic004G116200 Sobic004G171500--Sobic004G116200 Sobic004G171500--Sobic010G102900 Sobic002G088000 Sobic002G088000 Sobic004G171500--Sobic002G088000 Sobic002G417900 Sobic002G417900 Sobic004G171500--Sobic002G417900 Sobic009G116500 Sobic009G116500 Sobic004G171500--Sobic009G116500 Sobic010G102900--Sobic008G071900 Sobic010G102900--Sobic003G227800 Sobic010G102900--Sobic001G142600 Sobic010G102900--Sobic005G001500 Sobic010G102900--Sobic009G021300 Sobic010G102900--Sobic004G171500 Sobic010G102900--Sobic008G001700 Sobic005G056300 Sobic005G056300 Sobic010G102900--Sobic005G056300 Sobic003G063900 Sobic003G063900 Sobic010G102900--Sobic003G063900 Sobic008G001700--Sobic004G171500 Sobic008G001700--Sobic008G071900 Sobic008G001700--Sobic001G362900 Sobic008G001700--Sobic004G116200 Sobic008G001700--Sobic009G021300 Sobic008G001700--Sobic004G085100 Sobic008G001700--Sobic010G102900 Sobic007G147300 Sobic007G147300 Sobic008G001700--Sobic007G147300 Sobic008G001700--Sobic002G088000 Sobic001G362900--Sobic004G085100 Sobic001G362900--Sobic004G171500 Sobic001G362900--Sobic002G088000 Sobic001G362900--Sobic008G001700 Sobic001G362900--Sobic008G071900 Sobic001G362900--Sobic004G116200 Sobic001G362900--Sobic002G417900 Sobic001G362900--Sobic009G116500 Sobic001G297800 Sobic001G297800 Sobic001G362900--Sobic001G297800 Sobic009G021300--Sobic005G001500 Sobic007G122932 Sobic007G122932 Sobic009G021300--Sobic007G122932 Sobic002G408700 Sobic002G408700 Sobic009G021300--Sobic002G408700 Sobic009G021300--Sobic010G102900 Sobic009G021300--Sobic008G001700 Sobic009G021300--Sobic008G071900 Sobic009G021300--Sobic007G147300 Sobic007G123000 Sobic007G123000 Sobic009G021300--Sobic007G123000 Sobic009G021300--Sobic003G227800 Sobic003G227800--Sobic005G056300 Sobic003G227800--Sobic010G102900 Sobic003G227800--Sobic001G142600 Sobic003G227800--Sobic003G063900 Sobic005G079300 Sobic005G079300 Sobic003G227800--Sobic005G079300 Sobic003G135000 Sobic003G135000 Sobic003G227800--Sobic003G135000 Sobic003G227800--Sobic008G071900 Sobic006G080500 Sobic006G080500 Sobic003G227800--Sobic006G080500 Sobic003G227800--Sobic005G001500 Sobic001G142600--Sobic003G227800 Sobic001G142600--Sobic010G102900 Sobic006G104800 Sobic006G104800 Sobic001G142600--Sobic006G104800 Sobic001G142600--Sobic003G063900 Sobic001G142600--Sobic008G071900 Sobic001G142600--Sobic005G001500 Sobic002G053100 Sobic002G053100 Sobic001G142600--Sobic002G053100 Sobic001G142600--Sobic002G408700 Sobic001G142600--Sobic005G056300 Sobic004G099750 Sobic004G099750 Sobic004G294100--Sobic004G099750 Sobic001G175501 Sobic001G175501 Sobic004G294100--Sobic001G175501 Sobic006G178400 Sobic006G178400 Sobic004G294100--Sobic006G178400 Sobic004G294100--Sobic003G135000 Sobic001G158600 Sobic001G158600 Sobic004G294100--Sobic001G158600 Sobic001G253400 Sobic001G253400 Sobic004G294100--Sobic001G253400 Sobic005G193700 Sobic005G193700 Sobic004G294100--Sobic005G193700 Sobic004G139700 Sobic004G139700 Sobic004G294100--Sobic004G139700 Sobic004G294100--Sobic006G104800
Octagon: transcription factors


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