Gene annotation
Transcriptome id Sobic.006G261200.1
Synonym Sb06g032410, SbTri17;SbTri17
Functional annotation Trihelix Family (PubMedID : 24864043)
GL4(Ortholog in rice:Wu et al. (2017) ) (PubMedID : 31659902)
transcription factor, putative, expressed
UniProt A0A1B6PNZ9
Pfam PF13837
Panther DB PTHR33492 PTHR33492:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G31310 : hydroxyproline-rich glycoprotein family protein
RAP-DB (Rice) LOC_Os04g57530.1 : transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a009366
Brachypodium PNT62111 , KQJ85218
Barley -
Wheat TraesCS2B02G579700 , TraesCS2A02G549300 , TraesCS2D02G549900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G023600 ATP binding protein, putative, expressed -
2 Sobic.001G170500 expressed protein -
3 Sobic.009G168300 expressed protein -
4 Sobic.003G402100 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed -
5 Sobic.010G118200 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
6 Sobic.004G250600 NHL repeat-containing protein, putative, expressed -
7 Sobic.009G017000 expressed protein -
8 Sobic.009G253800 aspartic proteinase, putative, expressed -
9 Sobic.001G068200 - -
10 Sobic.004G256400 glycosyltransferase, putative, expressed -
11 Sobic.001G053700 PAZ domain containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
12 Sobic.009G227000 expressed protein -
13 Sobic.010G180200 transcription factor S-II, central domain containing protein, expressed -
14 Sobic.002G360900 GASR9 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
15 Sobic.001G518700 DEF8 - Defensin and Defensin-like DEFL family, expressed -
16 Sobic.009G077250 - -
17 Sobic.009G025100 transporter, putative, expressed -
18 Sobic.008G013000 expressed protein -
19 Sobic.007G091200 wax synthase isoform 1, putative, expressed -
20 Sobic.003G304500 expressed protein -


Gene co-expression network
sample Sobic006G261200 Sobic006G261200 Sobic007G023600 Sobic007G023600 Sobic006G261200--Sobic007G023600 Sobic001G170500 Sobic001G170500 Sobic006G261200--Sobic001G170500 Sobic009G168300 Sobic009G168300 Sobic006G261200--Sobic009G168300 Sobic003G402100 Sobic003G402100 Sobic006G261200--Sobic003G402100 Sobic010G118200 Sobic010G118200 Sobic006G261200--Sobic010G118200 Sobic004G250600 Sobic004G250600 Sobic006G261200--Sobic004G250600 Sobic009G017000 Sobic009G017000 Sobic006G261200--Sobic009G017000 Sobic009G253800 Sobic009G253800 Sobic006G261200--Sobic009G253800 Sobic001G068200 Sobic001G068200 Sobic006G261200--Sobic001G068200 Sobic007G023600--Sobic009G253800 Sobic007G023600--Sobic006G261200 Sobic007G023600--Sobic003G402100 Sobic004G190200 Sobic004G190200 Sobic007G023600--Sobic004G190200 Sobic007G023600--Sobic010G118200 Sobic007G023600--Sobic001G170500 Sobic007G091200 Sobic007G091200 Sobic007G023600--Sobic007G091200 Sobic007G023600--Sobic004G250600 Sobic004G294500 Sobic004G294500 Sobic007G023600--Sobic004G294500 Sobic009G025100 Sobic009G025100 Sobic001G170500--Sobic009G025100 Sobic009G007500 Sobic009G007500 Sobic001G170500--Sobic009G007500 Sobic008G088450 Sobic008G088450 Sobic001G170500--Sobic008G088450 Sobic001G170500--Sobic010G118200 Sobic001G170500--Sobic009G253800 Sobic009G227000 Sobic009G227000 Sobic001G170500--Sobic009G227000 Sobic001G170500--Sobic004G294500 Sobic003G024700 Sobic003G024700 Sobic001G170500--Sobic003G024700 Sobic001G518700 Sobic001G518700 Sobic001G170500--Sobic001G518700 Sobic008G071900 Sobic008G071900 Sobic009G168300--Sobic008G071900 Sobic004G171500 Sobic004G171500 Sobic009G168300--Sobic004G171500 Sobic010G102900 Sobic010G102900 Sobic009G168300--Sobic010G102900 Sobic008G001700 Sobic008G001700 Sobic009G168300--Sobic008G001700 Sobic001G362900 Sobic001G362900 Sobic009G168300--Sobic001G362900 Sobic009G021300 Sobic009G021300 Sobic009G168300--Sobic009G021300 Sobic003G227800 Sobic003G227800 Sobic009G168300--Sobic003G227800 Sobic001G142600 Sobic001G142600 Sobic009G168300--Sobic001G142600 Sobic004G294100 Sobic004G294100 Sobic009G168300--Sobic004G294100 Sobic001G394900 Sobic001G394900 Sobic003G402100--Sobic001G394900 Sobic003G402100--Sobic001G170500 Sobic003G402100--Sobic007G023600 Sobic004G254400 Sobic004G254400 Sobic003G402100--Sobic004G254400 Sobic001G053700 Sobic001G053700 Sobic003G402100--Sobic001G053700 Sobic010G180200 Sobic010G180200 Sobic003G402100--Sobic010G180200 Sobic003G402100--Sobic009G227000 Sobic004G274500 Sobic004G274500 Sobic003G402100--Sobic004G274500 Sobic008G176300 Sobic008G176300 Sobic003G402100--Sobic008G176300 Sobic010G118200--Sobic007G091200 Sobic006G104800 Sobic006G104800 Sobic010G118200--Sobic006G104800 Sobic010G118200--Sobic004G294100 Sobic001G425900 Sobic001G425900 Sobic010G118200--Sobic001G425900 Sobic010G118200--Sobic008G071900 Sobic010G118200--Sobic001G142600 Sobic010G118200--Sobic009G168300 Sobic010G118200--Sobic010G102900 Sobic010G118200--Sobic001G170500 Sobic004G250600--Sobic007G023600 Sobic004G250600--Sobic006G261200 Sobic003G217500 Sobic003G217500 Sobic004G250600--Sobic003G217500 Sobic004G250600--Sobic001G170500 Sobic003G304500 Sobic003G304500 Sobic004G250600--Sobic003G304500 Sobic006G186300 Sobic006G186300 Sobic004G250600--Sobic006G186300 Sobic008G179800 Sobic008G179800 Sobic004G250600--Sobic008G179800 Sobic010G207400 Sobic010G207400 Sobic004G250600--Sobic010G207400 Sobic004G250600--Sobic009G025100 Sobic003G214650 Sobic003G214650 Sobic009G017000--Sobic003G214650 Sobic009G017000--Sobic006G186300 Sobic009G017000--Sobic006G261200 Sobic006G015800 Sobic006G015800 Sobic009G017000--Sobic006G015800 Sobic007G041200 Sobic007G041200 Sobic009G017000--Sobic007G041200 Sobic008G037100 Sobic008G037100 Sobic009G017000--Sobic008G037100 Sobic009G017000--Sobic010G118200 Sobic001G150300 Sobic001G150300 Sobic009G017000--Sobic001G150300 Sobic009G017000--Sobic009G168300 Sobic009G253800--Sobic004G294500 Sobic009G253800--Sobic004G190200 Sobic009G253800--Sobic009G007500 Sobic009G253800--Sobic007G091200 Sobic009G253800--Sobic001G518700 Sobic002G141450 Sobic002G141450 Sobic009G253800--Sobic002G141450 Sobic009G253800--Sobic001G170500 Sobic009G253800--Sobic008G088450 Sobic009G253800--Sobic007G023600 Sobic006G051750 Sobic006G051750 Sobic001G068200--Sobic006G051750 Sobic010G085700 Sobic010G085700 Sobic001G068200--Sobic010G085700 Sobic004G261000 Sobic004G261000 Sobic001G068200--Sobic004G261000 Sobic010G200400 Sobic010G200400 Sobic001G068200--Sobic010G200400 Sobic007G205100 Sobic007G205100 Sobic001G068200--Sobic007G205100 Sobic008G081000 Sobic008G081000 Sobic001G068200--Sobic008G081000 Sobic002G338600 Sobic002G338600 Sobic001G068200--Sobic002G338600 Sobic001G259250 Sobic001G259250 Sobic001G068200--Sobic001G259250 Sobic005G153200 Sobic005G153200 Sobic001G068200--Sobic005G153200
Octagon: transcription factors


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