Gene annotation
Transcriptome id Sobic.005G013300.1
Synonym 1, GFS1, VSR1, BP80B, ATVSR1, BP-80, ATELP1, Sb05g001160, ATELP, BP80-1, BP80
Functional annotation vacuolar-sorting receptor precursor, putative, expressed
UniProt C6JRX3 , C5Y3H0 , C6JRX4 , A0A109NDI2 , C6JRW8
Pfam PF02225
Panther DB PTHR22765 PTHR22765:SF58
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52850 : vacuolar sorting receptor homolog 1
RAP-DB (Rice) LOC_Os11g02464.1 : vacuolar-sorting receptor precursor, putative, expressed
MaizeGDB (Corn) Zm00025a033308 , Zm00025a002348 , Zm00025a052424 , Zm00025a013184
Brachypodium KQK21802 , KQJ92548
Barley HORVU5Hr1G046470.1 , HORVU5Hr1G046490.18 , HORVU5Hr1G046490.19 , HORVU5Hr1G046490.14 , HORVU5Hr1G046490.15 , HORVU5Hr1G046490.16 , HORVU5Hr1G046490.17 , HORVU5Hr1G046490.10 , HORVU5Hr1G046490.11 , HORVU5Hr1G046490.12 , HORVU5Hr1G046490.13 , HORVU4Hr1G022950.10 , HORVU4Hr1G022950.11 , HORVU5Hr1G046490.20 , HORVU5Hr1G046490.23 , HORVU5Hr1G046490.25 , HORVU5Hr1G046490.24 , HORVU5Hr1G046490.6 , HORVU5Hr1G046490.7 , HORVU5Hr1G046490.4 , HORVU5Hr1G046490.5 , HORVU5Hr1G046490.2 , HORVU5Hr1G046490.3 , HORVU5Hr1G046490.1 , HORVU5Hr1G046490.8 , HORVU5Hr1G046490.9 , HORVU5Hr1G046490.21 , HORVU5Hr1G046490.22 , HORVU5Hr1G046490.27 , HORVU5Hr1G046490.26 , HORVU4Hr1G022950.8 , HORVU4Hr1G022950.9 , HORVU4Hr1G022950.1 , HORVU4Hr1G022950.2 , HORVU4Hr1G022950.3 , HORVU4Hr1G022950.4 , HORVU4Hr1G022950.5 , HORVU4Hr1G022950.6
Wheat TraesCS5B02G145700 , TraesCS4A02G193900 , TraesCS4B02G121300 , TraesCS5A02G050500 , TraesCS5A02G050400 , TraesCS4D02G119400 , TraesCS5A02G050400 , TraesCS5B02G056400 , TraesCS4B02G121300 , TraesCS5D02G145500 , TraesCS5D02G145500 , TraesCS5A02G146800 , TraesCS5A02G146800
Populus PNT30935 , PNT30936 , PNT20400 , PNT20401 , PNT20402


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cDNA sequences
Sobic.005G013300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
2 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
3 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
4 Sobic.001G395200 cyclin-related protein, putative, expressed -
5 Sobic.004G207000 fasciated ear2, putative, expressed -
6 Sobic.001G540700 expressed protein -
7 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
8 Sobic.009G257500 expressed protein -
9 Sobic.009G167100 TBC domain containing protein, expressed -
10 Sobic.002G302600 OsFBX291 - F-box domain containing protein, expressed -
11 Sobic.006G193500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.003G027800 protein kinase family protein, putative, expressed -
13 Sobic.003G153900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.006G126600 Trihelix Family(PubMedID : 24864043)@MYB family transcription factor, putative, expressed -
15 Sobic.007G125700 NHL repeat-containing protein, putative, expressed -
16 Sobic.008G113300 expressed protein -
17 Sobic.010G149600 intracellular protein transport protein USO1-related, putative, expressed -
18 Sobic.009G031500 agenet domain containing protein, putative, expressed -
19 Sobic.003G049600 CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
20 Sobic.003G104100 expressed protein -


Gene co-expression network
sample Sobic005G013300 Sobic005G013300 Sobic009G254000 Sobic009G254000 Sobic005G013300--Sobic009G254000 Sobic002G006100 Sobic002G006100 Sobic005G013300--Sobic002G006100 Sobic001G425700 Sobic001G425700 Sobic005G013300--Sobic001G425700 Sobic001G395200 Sobic001G395200 Sobic005G013300--Sobic001G395200 Sobic004G207000 Sobic004G207000 Sobic005G013300--Sobic004G207000 Sobic001G540700 Sobic001G540700 Sobic005G013300--Sobic001G540700 Sobic003G298900 Sobic003G298900 Sobic005G013300--Sobic003G298900 Sobic009G257500 Sobic009G257500 Sobic005G013300--Sobic009G257500 Sobic009G167100 Sobic009G167100 Sobic005G013300--Sobic009G167100 Sobic006G140300 Sobic006G140300 Sobic009G254000--Sobic006G140300 Sobic007G197100 Sobic007G197100 Sobic009G254000--Sobic007G197100 Sobic009G254000--Sobic003G298900 Sobic002G366000 Sobic002G366000 Sobic009G254000--Sobic002G366000 Sobic009G254000--Sobic001G540700 Sobic003G224700 Sobic003G224700 Sobic009G254000--Sobic003G224700 Sobic009G254000--Sobic002G006100 Sobic004G250600 Sobic004G250600 Sobic009G254000--Sobic004G250600 Sobic009G254000--Sobic005G013300 Sobic002G027600 Sobic002G027600 Sobic002G006100--Sobic002G027600 Sobic003G259300 Sobic003G259300 Sobic002G006100--Sobic003G259300 Sobic006G272800 Sobic006G272800 Sobic002G006100--Sobic006G272800 Sobic003G351900 Sobic003G351900 Sobic002G006100--Sobic003G351900 Sobic002G006100--Sobic001G425700 Sobic002G006100--Sobic003G298900 Sobic002G284100 Sobic002G284100 Sobic002G006100--Sobic002G284100 Sobic004G078500 Sobic004G078500 Sobic002G006100--Sobic004G078500 Sobic009G225500 Sobic009G225500 Sobic002G006100--Sobic009G225500 Sobic001G425700--Sobic003G259300 Sobic003G226700 Sobic003G226700 Sobic001G425700--Sobic003G226700 Sobic001G425700--Sobic002G006100 Sobic003G024000 Sobic003G024000 Sobic001G425700--Sobic003G024000 Sobic003G104100 Sobic003G104100 Sobic001G425700--Sobic003G104100 Sobic004G164700 Sobic004G164700 Sobic001G425700--Sobic004G164700 Sobic001G425700--Sobic009G225500 Sobic006G281900 Sobic006G281900 Sobic001G425700--Sobic006G281900 Sobic009G127800 Sobic009G127800 Sobic001G425700--Sobic009G127800 Sobic001G395200--Sobic003G104100 Sobic009G259900 Sobic009G259900 Sobic001G395200--Sobic009G259900 Sobic002G219900 Sobic002G219900 Sobic001G395200--Sobic002G219900 Sobic010G149600 Sobic010G149600 Sobic001G395200--Sobic010G149600 Sobic001G395200--Sobic003G351900 Sobic006G008300 Sobic006G008300 Sobic001G395200--Sobic006G008300 Sobic007G125700 Sobic007G125700 Sobic001G395200--Sobic007G125700 Sobic004G043750 Sobic004G043750 Sobic001G395200--Sobic004G043750 Sobic001G079900 Sobic001G079900 Sobic001G395200--Sobic001G079900 Sobic006G022400 Sobic006G022400 Sobic004G207000--Sobic006G022400 Sobic004G207000--Sobic001G540700 Sobic004G207000--Sobic007G125700 Sobic009G006900 Sobic009G006900 Sobic004G207000--Sobic009G006900 Sobic002G302600 Sobic002G302600 Sobic004G207000--Sobic002G302600 Sobic004G149400 Sobic004G149400 Sobic004G207000--Sobic004G149400 Sobic005G032600 Sobic005G032600 Sobic004G207000--Sobic005G032600 Sobic004G207000--Sobic010G149600 Sobic009G031500 Sobic009G031500 Sobic004G207000--Sobic009G031500 Sobic001G540700--Sobic002G284100 Sobic001G540700--Sobic007G197100 Sobic001G540700--Sobic004G207000 Sobic004G267600 Sobic004G267600 Sobic001G540700--Sobic004G267600 Sobic004G315700 Sobic004G315700 Sobic001G540700--Sobic004G315700 Sobic001G540700--Sobic006G272800 Sobic001G487200 Sobic001G487200 Sobic001G540700--Sobic001G487200 Sobic001G369800 Sobic001G369800 Sobic001G540700--Sobic001G369800 Sobic003G345000 Sobic003G345000 Sobic001G540700--Sobic003G345000 Sobic003G298900--Sobic002G006100 Sobic003G298900--Sobic001G540700 Sobic001G123100 Sobic001G123100 Sobic003G298900--Sobic001G123100 Sobic003G298900--Sobic009G254000 Sobic009G005700 Sobic009G005700 Sobic003G298900--Sobic009G005700 Sobic005G064100 Sobic005G064100 Sobic003G298900--Sobic005G064100 Sobic002G253900 Sobic002G253900 Sobic003G298900--Sobic002G253900 Sobic003G411700 Sobic003G411700 Sobic003G298900--Sobic003G411700 Sobic003G298900--Sobic007G197100 Sobic006G126600 Sobic006G126600 Sobic009G257500--Sobic006G126600 Sobic009G032200 Sobic009G032200 Sobic009G257500--Sobic009G032200 Sobic008G045800 Sobic008G045800 Sobic009G257500--Sobic008G045800 Sobic003G415100 Sobic003G415100 Sobic009G257500--Sobic003G415100 Sobic008G056200 Sobic008G056200 Sobic009G257500--Sobic008G056200 Sobic010G189100 Sobic010G189100 Sobic009G257500--Sobic010G189100 Sobic010G236200 Sobic010G236200 Sobic009G257500--Sobic010G236200 Sobic008G156200 Sobic008G156200 Sobic009G257500--Sobic008G156200 Sobic010G262900 Sobic010G262900 Sobic009G257500--Sobic010G262900 Sobic010G250800 Sobic010G250800 Sobic009G167100--Sobic010G250800 Sobic009G061000 Sobic009G061000 Sobic009G167100--Sobic009G061000 Sobic006G257200 Sobic006G257200 Sobic009G167100--Sobic006G257200 Sobic001G385400 Sobic001G385400 Sobic009G167100--Sobic001G385400 Sobic008G015200 Sobic008G015200 Sobic009G167100--Sobic008G015200 Sobic002G320600 Sobic002G320600 Sobic009G167100--Sobic002G320600 Sobic003G027800 Sobic003G027800 Sobic009G167100--Sobic003G027800 Sobic009G052100 Sobic009G052100 Sobic009G167100--Sobic009G052100 Sobic008G192700 Sobic008G192700 Sobic009G167100--Sobic008G192700
Octagon: transcription factors


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