Gene annotation
Transcriptome id Sobic.008G113300.2,Sobic.008G113300.1
Synonym Sb08g016720
Functional annotation expressed protein
UniProt C5YP85 , A0A1B6PDG8
Pfam -
Panther DB PTHR34568 PTHR34568:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52170 : DNA binding
RAP-DB (Rice) LOC_Os12g34350.2,LOC_Os12g34350.1 : expressed protein
MaizeGDB (Corn) Zm00025a025550 , Zm00025a054399 , Zm00025a033020
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G006800 pentatricopeptide, putative, expressed -
2 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
3 Sobic.004G164700 expressed protein -
4 Sobic.006G241800 receptor kinase, putative, expressed -
5 Sobic.003G351900 fasciclin-like arabinogalactan protein, putative, expressed -
6 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
7 Sobic.005G163400 dnaJ domain containing protein, expressed -
8 Sobic.003G153900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.009G177200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
10 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
11 Sobic.010G024500 expressed protein -
12 Sobic.009G002900 expressed protein -
13 Sobic.006G142500 protein kinase, putative, expressed -
14 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase
15 Sobic.003G032200 IQ calmodulin-binding motif domain containing protein, expressed -
16 Sobic.003G318900 DNA repair metallo-beta-lactamase, putative, expressed K15341: DCLRE1B, DNA cross-link repair 1B protein
17 Sobic.008G075100 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K03575: A/G-specific adenine glycosylase
18 Sobic.002G168000 expressed protein -
19 Sobic.003G352100 pentatricopeptide, putative, expressed -
20 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -


Gene co-expression network
sample Sobic008G113300 Sobic008G113300 Sobic007G006800 Sobic007G006800 Sobic008G113300--Sobic007G006800 Sobic006G281900 Sobic006G281900 Sobic008G113300--Sobic006G281900 Sobic004G164700 Sobic004G164700 Sobic008G113300--Sobic004G164700 Sobic006G241800 Sobic006G241800 Sobic008G113300--Sobic006G241800 Sobic003G351900 Sobic003G351900 Sobic008G113300--Sobic003G351900 Sobic001G425700 Sobic001G425700 Sobic008G113300--Sobic001G425700 Sobic005G163400 Sobic005G163400 Sobic008G113300--Sobic005G163400 Sobic003G153900 Sobic003G153900 Sobic008G113300--Sobic003G153900 Sobic009G177200 Sobic009G177200 Sobic008G113300--Sobic009G177200 Sobic010G250800 Sobic010G250800 Sobic007G006800--Sobic010G250800 Sobic001G199500 Sobic001G199500 Sobic007G006800--Sobic001G199500 Sobic001G408300 Sobic001G408300 Sobic007G006800--Sobic001G408300 Sobic005G088900 Sobic005G088900 Sobic007G006800--Sobic005G088900 Sobic007G006800--Sobic008G113300 Sobic002G021200 Sobic002G021200 Sobic007G006800--Sobic002G021200 Sobic007G006800--Sobic006G281900 Sobic003G369200 Sobic003G369200 Sobic007G006800--Sobic003G369200 Sobic002G215200 Sobic002G215200 Sobic007G006800--Sobic002G215200 Sobic002G168000 Sobic002G168000 Sobic006G281900--Sobic002G168000 Sobic006G281900--Sobic002G021200 Sobic009G188900 Sobic009G188900 Sobic006G281900--Sobic009G188900 Sobic001G290500 Sobic001G290500 Sobic006G281900--Sobic001G290500 Sobic006G281900--Sobic001G199500 Sobic006G281900--Sobic001G425700 Sobic009G225500 Sobic009G225500 Sobic006G281900--Sobic009G225500 Sobic007G187700 Sobic007G187700 Sobic006G281900--Sobic007G187700 Sobic003G024000 Sobic003G024000 Sobic006G281900--Sobic003G024000 Sobic004G164700--Sobic006G241800 Sobic002G362700 Sobic002G362700 Sobic004G164700--Sobic002G362700 Sobic008G190000 Sobic008G190000 Sobic004G164700--Sobic008G190000 Sobic001G461800 Sobic001G461800 Sobic004G164700--Sobic001G461800 Sobic006G142500 Sobic006G142500 Sobic004G164700--Sobic006G142500 Sobic010G024500 Sobic010G024500 Sobic004G164700--Sobic010G024500 Sobic003G041900 Sobic003G041900 Sobic004G164700--Sobic003G041900 Sobic004G164700--Sobic001G425700 Sobic010G086000 Sobic010G086000 Sobic004G164700--Sobic010G086000 Sobic003G291000 Sobic003G291000 Sobic006G241800--Sobic003G291000 Sobic003G018700 Sobic003G018700 Sobic006G241800--Sobic003G018700 Sobic004G317200 Sobic004G317200 Sobic006G241800--Sobic004G317200 Sobic006G241800--Sobic004G164700 Sobic006G241800--Sobic010G024500 Sobic002G311000 Sobic002G311000 Sobic006G241800--Sobic002G311000 Sobic010G020600 Sobic010G020600 Sobic006G241800--Sobic010G020600 Sobic001G381100 Sobic001G381100 Sobic006G241800--Sobic001G381100 Sobic001G074100 Sobic001G074100 Sobic006G241800--Sobic001G074100 Sobic003G351900--Sobic006G142500 Sobic001G079900 Sobic001G079900 Sobic003G351900--Sobic001G079900 Sobic002G006100 Sobic002G006100 Sobic003G351900--Sobic002G006100 Sobic002G027600 Sobic002G027600 Sobic003G351900--Sobic002G027600 Sobic003G351900--Sobic003G153900 Sobic001G212600 Sobic001G212600 Sobic003G351900--Sobic001G212600 Sobic005G032600 Sobic005G032600 Sobic003G351900--Sobic005G032600 Sobic003G351900--Sobic004G164700 Sobic001G395200 Sobic001G395200 Sobic003G351900--Sobic001G395200 Sobic003G259300 Sobic003G259300 Sobic001G425700--Sobic003G259300 Sobic003G226700 Sobic003G226700 Sobic001G425700--Sobic003G226700 Sobic001G425700--Sobic002G006100 Sobic001G425700--Sobic003G024000 Sobic003G104100 Sobic003G104100 Sobic001G425700--Sobic003G104100 Sobic001G425700--Sobic004G164700 Sobic001G425700--Sobic009G225500 Sobic001G425700--Sobic006G281900 Sobic009G127800 Sobic009G127800 Sobic001G425700--Sobic009G127800 Sobic005G163400--Sobic010G024500 Sobic001G390400 Sobic001G390400 Sobic005G163400--Sobic001G390400 Sobic009G077300 Sobic009G077300 Sobic005G163400--Sobic009G077300 Sobic005G163400--Sobic003G104100 Sobic008G052300 Sobic008G052300 Sobic005G163400--Sobic008G052300 Sobic005G163400--Sobic008G190000 Sobic001G054700 Sobic001G054700 Sobic005G163400--Sobic001G054700 Sobic005G153000 Sobic005G153000 Sobic005G163400--Sobic005G153000 Sobic002G050700 Sobic002G050700 Sobic005G163400--Sobic002G050700 Sobic003G153900--Sobic003G351900 Sobic008G169400 Sobic008G169400 Sobic003G153900--Sobic008G169400 Sobic003G153900--Sobic002G021200 Sobic003G153900--Sobic006G281900 Sobic003G153900--Sobic001G079900 Sobic002G370400 Sobic002G370400 Sobic003G153900--Sobic002G370400 Sobic001G369800 Sobic001G369800 Sobic003G153900--Sobic001G369800 Sobic009G212100 Sobic009G212100 Sobic003G153900--Sobic009G212100 Sobic006G008300 Sobic006G008300 Sobic003G153900--Sobic006G008300 Sobic001G537400 Sobic001G537400 Sobic009G177200--Sobic001G537400 Sobic009G002900 Sobic009G002900 Sobic009G177200--Sobic009G002900 Sobic009G177200--Sobic001G199500 Sobic009G177200--Sobic001G395200 Sobic009G177200--Sobic008G113300 Sobic008G045000 Sobic008G045000 Sobic009G177200--Sobic008G045000 Sobic003G223000 Sobic003G223000 Sobic009G177200--Sobic003G223000 Sobic006G140400 Sobic006G140400 Sobic009G177200--Sobic006G140400 Sobic009G177200--Sobic001G425700
Octagon: transcription factors


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