Gene annotation
Transcriptome id Sobic.003G027800.1
Synonym Sb03g002610
Functional annotation protein kinase family protein, putative, expressed
UniProt C5XL94
Pfam PF00069
Panther DB PTHR24056 PTHR24056:SF204
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G53050 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os01g10430.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a035856 , Zm00025a022971
Brachypodium KQK03197
Barley HORVU3Hr1G026900.12 , HORVU3Hr1G026900.10 , HORVU3Hr1G026900.11 , HORVU3Hr1G026900.8 , HORVU3Hr1G026900.9 , HORVU3Hr1G026900.1 , HORVU3Hr1G026900.3 , HORVU3Hr1G026900.4 , HORVU3Hr1G026900.5 , HORVU3Hr1G026900.6 , HORVU3Hr1G026900.7
Wheat TraesCS3B02G158600 , TraesCS3A02G313300 , TraesCS3D02G141000 , TraesCS3D02G141000
Populus -


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cDNA sequences
Sobic.003G027800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G219900 Spc97 / Spc98 family protein, putative, expressed K16570: TUBGCP3, gamma-tubulin complex component 3
2 Sobic.008G169400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed -
3 Sobic.007G128100 expressed protein -
4 Sobic.008G038200 TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed -
5 Sobic.005G032600 glucan endo-1,3-beta-glucosidase-related, putative, expressed -
6 Sobic.009G167100 TBC domain containing protein, expressed -
7 Sobic.009G031500 agenet domain containing protein, putative, expressed -
8 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
9 Sobic.006G179300 OsFBX64 - F-box domain containing protein, expressed -
10 Sobic.008G015200 NAP1, putative, expressed K05750: NCKAP1, NCK-associated protein 1
11 Sobic.007G125700 NHL repeat-containing protein, putative, expressed -
12 Sobic.004G207000 fasciated ear2, putative, expressed -
13 Sobic.002G074000 expressed protein -
14 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
15 Sobic.001G079900 expressed protein -
16 Sobic.002G293700 ATXR, putative, expressed -
17 Sobic.008G192700 ATMAP70 protein, putative, expressed -
18 Sobic.001G395200 cyclin-related protein, putative, expressed -
19 Sobic.010G149600 intracellular protein transport protein USO1-related, putative, expressed -
20 Sobic.002G098500 H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -


Gene co-expression network
sample Sobic003G027800 Sobic003G027800 Sobic002G219900 Sobic002G219900 Sobic003G027800--Sobic002G219900 Sobic008G169400 Sobic008G169400 Sobic003G027800--Sobic008G169400 Sobic007G128100 Sobic007G128100 Sobic003G027800--Sobic007G128100 Sobic008G038200 Sobic008G038200 Sobic003G027800--Sobic008G038200 Sobic005G032600 Sobic005G032600 Sobic003G027800--Sobic005G032600 Sobic009G167100 Sobic009G167100 Sobic003G027800--Sobic009G167100 Sobic009G031500 Sobic009G031500 Sobic003G027800--Sobic009G031500 Sobic001G113800 Sobic001G113800 Sobic003G027800--Sobic001G113800 Sobic006G179300 Sobic006G179300 Sobic003G027800--Sobic006G179300 Sobic002G430900 Sobic002G430900 Sobic002G219900--Sobic002G430900 Sobic010G149600 Sobic010G149600 Sobic002G219900--Sobic010G149600 Sobic007G125700 Sobic007G125700 Sobic002G219900--Sobic007G125700 Sobic001G395200 Sobic001G395200 Sobic002G219900--Sobic001G395200 Sobic006G280100 Sobic006G280100 Sobic002G219900--Sobic006G280100 Sobic003G361400 Sobic003G361400 Sobic002G219900--Sobic003G361400 Sobic001G143600 Sobic001G143600 Sobic002G219900--Sobic001G143600 Sobic003G274400 Sobic003G274400 Sobic002G219900--Sobic003G274400 Sobic002G219900--Sobic003G027800 Sobic001G079900 Sobic001G079900 Sobic008G169400--Sobic001G079900 Sobic003G153900 Sobic003G153900 Sobic008G169400--Sobic003G153900 Sobic007G031300 Sobic007G031300 Sobic008G169400--Sobic007G031300 Sobic009G141700 Sobic009G141700 Sobic008G169400--Sobic009G141700 Sobic002G370400 Sobic002G370400 Sobic008G169400--Sobic002G370400 Sobic001G494100 Sobic001G494100 Sobic008G169400--Sobic001G494100 Sobic002G293700 Sobic002G293700 Sobic008G169400--Sobic002G293700 Sobic009G158900 Sobic009G158900 Sobic008G169400--Sobic009G158900 Sobic003G397100 Sobic003G397100 Sobic008G169400--Sobic003G397100 Sobic007G023100 Sobic007G023100 Sobic007G128100--Sobic007G023100 Sobic005G062600 Sobic005G062600 Sobic007G128100--Sobic005G062600 Sobic007G161600 Sobic007G161600 Sobic007G128100--Sobic007G161600 Sobic007G128100--Sobic008G038200 Sobic001G298800 Sobic001G298800 Sobic007G128100--Sobic001G298800 Sobic007G128100--Sobic003G027800 Sobic003G019900 Sobic003G019900 Sobic007G128100--Sobic003G019900 Sobic008G151600 Sobic008G151600 Sobic007G128100--Sobic008G151600 Sobic003G008800 Sobic003G008800 Sobic007G128100--Sobic003G008800 Sobic007G065300 Sobic007G065300 Sobic008G038200--Sobic007G065300 Sobic002G098500 Sobic002G098500 Sobic008G038200--Sobic002G098500 Sobic008G038200--Sobic001G298800 Sobic003G096300 Sobic003G096300 Sobic008G038200--Sobic003G096300 Sobic001G518000 Sobic001G518000 Sobic008G038200--Sobic001G518000 Sobic006G241800 Sobic006G241800 Sobic008G038200--Sobic006G241800 Sobic003G177000 Sobic003G177000 Sobic008G038200--Sobic003G177000 Sobic010G135300 Sobic010G135300 Sobic008G038200--Sobic010G135300 Sobic008G038200--Sobic007G128100 Sobic002G027600 Sobic002G027600 Sobic005G032600--Sobic002G027600 Sobic004G267600 Sobic004G267600 Sobic005G032600--Sobic004G267600 Sobic005G032600--Sobic001G079900 Sobic005G032600--Sobic003G019900 Sobic006G272800 Sobic006G272800 Sobic005G032600--Sobic006G272800 Sobic001G493900 Sobic001G493900 Sobic005G032600--Sobic001G493900 Sobic005G032600--Sobic008G151600 Sobic003G351900 Sobic003G351900 Sobic005G032600--Sobic003G351900 Sobic007G032100 Sobic007G032100 Sobic005G032600--Sobic007G032100 Sobic010G250800 Sobic010G250800 Sobic009G167100--Sobic010G250800 Sobic009G061000 Sobic009G061000 Sobic009G167100--Sobic009G061000 Sobic006G257200 Sobic006G257200 Sobic009G167100--Sobic006G257200 Sobic001G385400 Sobic001G385400 Sobic009G167100--Sobic001G385400 Sobic008G015200 Sobic008G015200 Sobic009G167100--Sobic008G015200 Sobic002G320600 Sobic002G320600 Sobic009G167100--Sobic002G320600 Sobic009G167100--Sobic003G027800 Sobic009G052100 Sobic009G052100 Sobic009G167100--Sobic009G052100 Sobic008G192700 Sobic008G192700 Sobic009G167100--Sobic008G192700 Sobic004G207000 Sobic004G207000 Sobic009G031500--Sobic004G207000 Sobic001G540700 Sobic001G540700 Sobic009G031500--Sobic001G540700 Sobic006G126600 Sobic006G126600 Sobic009G031500--Sobic006G126600 Sobic009G031500--Sobic007G125700 Sobic001G487200 Sobic001G487200 Sobic009G031500--Sobic001G487200 Sobic009G031500--Sobic003G274400 Sobic003G077500 Sobic003G077500 Sobic009G031500--Sobic003G077500 Sobic004G206300 Sobic004G206300 Sobic009G031500--Sobic004G206300 Sobic009G031500--Sobic003G027800 Sobic001G113800--Sobic001G487200 Sobic003G360700 Sobic003G360700 Sobic001G113800--Sobic003G360700 Sobic001G231200 Sobic001G231200 Sobic001G113800--Sobic001G231200 Sobic003G230000 Sobic003G230000 Sobic001G113800--Sobic003G230000 Sobic001G113800--Sobic010G135300 Sobic001G113800--Sobic002G370400 Sobic002G002100 Sobic002G002100 Sobic001G113800--Sobic002G002100 Sobic001G074000 Sobic001G074000 Sobic001G113800--Sobic001G074000 Sobic006G272500 Sobic006G272500 Sobic001G113800--Sobic006G272500 Sobic003G360300 Sobic003G360300 Sobic006G179300--Sobic003G360300 Sobic008G080500 Sobic008G080500 Sobic006G179300--Sobic008G080500 Sobic006G179300--Sobic008G015200 Sobic006G179300--Sobic003G027800 Sobic006G179300--Sobic007G125700 Sobic008G045000 Sobic008G045000 Sobic006G179300--Sobic008G045000 Sobic004G342300 Sobic004G342300 Sobic006G179300--Sobic004G342300 Sobic006G179300--Sobic001G385400 Sobic006G179300--Sobic002G219900
Octagon: transcription factors


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