Gene annotation
Transcriptome id Sobic.006G140300.2,Sobic.006G140300.1
Synonym Sb06g021940
Functional annotation expressed protein
UniProt C5YBV7
Pfam PF14383 PF12552 PF14309
Panther DB PTHR21726 PTHR21726:SF36
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G28760 : Protein of unknown function (DUF3741)
RAP-DB (Rice) LOC_Os04g42770.5 : expressed protein
MaizeGDB (Corn) Zm00025a010746 , Zm00025a056438
Brachypodium PNT61423 , PNT61422 , PNT61425 , PNT61424 , PNT61427 , PNT61426 , PNT61429 , PNT61428 , KQJ83463 , KQJ83462 , KQJ83465 , KQJ83464 , KQJ83467 , KQJ83466 , KQJ83469 , KQJ83468
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
2 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
3 Sobic.010G180200 transcription factor S-II, central domain containing protein, expressed -
4 Sobic.003G217500 expressed protein -
5 Sobic.007G023600 ATP binding protein, putative, expressed -
6 Sobic.006G066400 cytochrome P450, putative, expressed K00517: indol-3-yl-methylglucosinolate hydroxylase
7 Sobic.006G200901 - -
8 Sobic.001G423300 outer membrane protein, OMP85 family, putative, expressed -
9 Sobic.004G250600 NHL repeat-containing protein, putative, expressed -
10 Sobic.008G179800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GATA zinc finger domain containing protein, expressed -
11 Sobic.002G343000 expressed protein -
12 Sobic.001G468000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF677 domain containing protein, putative, expressed -
13 Sobic.008G176900 expressed protein -
14 Sobic.008G045800 PHD-finger family protein, expressed -
15 Sobic.003G153500 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.006G261200 Trihelix Family(PubMedID : 24864043)@GL4(Ortholog in rice:Wu et al. (2017) )(PubMedID : 31659902)@transcription factor, putative, expressed -
17 Sobic.001G399600 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
18 Sobic.001G462401 - -
19 Sobic.002G230400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
20 Sobic.003G402100 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed -


Gene co-expression network
sample Sobic006G140300 Sobic006G140300 Sobic004G014100 Sobic004G014100 Sobic006G140300--Sobic004G014100 Sobic009G254000 Sobic009G254000 Sobic006G140300--Sobic009G254000 Sobic010G180200 Sobic010G180200 Sobic006G140300--Sobic010G180200 Sobic003G217500 Sobic003G217500 Sobic006G140300--Sobic003G217500 Sobic007G023600 Sobic007G023600 Sobic006G140300--Sobic007G023600 Sobic006G066400 Sobic006G066400 Sobic006G140300--Sobic006G066400 Sobic006G200901 Sobic006G200901 Sobic006G140300--Sobic006G200901 Sobic001G423300 Sobic001G423300 Sobic006G140300--Sobic001G423300 Sobic004G250600 Sobic004G250600 Sobic006G140300--Sobic004G250600 Sobic002G343000 Sobic002G343000 Sobic004G014100--Sobic002G343000 Sobic004G014100--Sobic006G200901 Sobic005G160200 Sobic005G160200 Sobic004G014100--Sobic005G160200 Sobic006G143300 Sobic006G143300 Sobic004G014100--Sobic006G143300 Sobic003G343200 Sobic003G343200 Sobic004G014100--Sobic003G343200 Sobic002G349000 Sobic002G349000 Sobic004G014100--Sobic002G349000 Sobic002G230400 Sobic002G230400 Sobic004G014100--Sobic002G230400 Sobic002G354800 Sobic002G354800 Sobic004G014100--Sobic002G354800 Sobic004G014100--Sobic006G140300 Sobic009G254000--Sobic006G140300 Sobic007G197100 Sobic007G197100 Sobic009G254000--Sobic007G197100 Sobic003G298900 Sobic003G298900 Sobic009G254000--Sobic003G298900 Sobic002G366000 Sobic002G366000 Sobic009G254000--Sobic002G366000 Sobic001G540700 Sobic001G540700 Sobic009G254000--Sobic001G540700 Sobic003G224700 Sobic003G224700 Sobic009G254000--Sobic003G224700 Sobic002G006100 Sobic002G006100 Sobic009G254000--Sobic002G006100 Sobic009G254000--Sobic004G250600 Sobic005G013300 Sobic005G013300 Sobic009G254000--Sobic005G013300 Sobic003G402100 Sobic003G402100 Sobic010G180200--Sobic003G402100 Sobic001G053700 Sobic001G053700 Sobic010G180200--Sobic001G053700 Sobic001G324800 Sobic001G324800 Sobic010G180200--Sobic001G324800 Sobic010G180200--Sobic006G066400 Sobic010G180200--Sobic004G014100 Sobic001G394900 Sobic001G394900 Sobic010G180200--Sobic001G394900 Sobic010G180200--Sobic007G023600 Sobic004G218000 Sobic004G218000 Sobic010G180200--Sobic004G218000 Sobic010G212700 Sobic010G212700 Sobic010G180200--Sobic010G212700 Sobic003G217500--Sobic004G250600 Sobic003G217500--Sobic006G200901 Sobic003G217500--Sobic004G014100 Sobic003G217500--Sobic002G343000 Sobic009G148000 Sobic009G148000 Sobic003G217500--Sobic009G148000 Sobic003G217500--Sobic006G140300 Sobic004G196800 Sobic004G196800 Sobic003G217500--Sobic004G196800 Sobic003G304500 Sobic003G304500 Sobic003G217500--Sobic003G304500 Sobic006G186300 Sobic006G186300 Sobic003G217500--Sobic006G186300 Sobic009G253800 Sobic009G253800 Sobic007G023600--Sobic009G253800 Sobic006G261200 Sobic006G261200 Sobic007G023600--Sobic006G261200 Sobic007G023600--Sobic003G402100 Sobic004G190200 Sobic004G190200 Sobic007G023600--Sobic004G190200 Sobic010G118200 Sobic010G118200 Sobic007G023600--Sobic010G118200 Sobic001G170500 Sobic001G170500 Sobic007G023600--Sobic001G170500 Sobic007G091200 Sobic007G091200 Sobic007G023600--Sobic007G091200 Sobic007G023600--Sobic004G250600 Sobic004G294500 Sobic004G294500 Sobic007G023600--Sobic004G294500 Sobic001G468000 Sobic001G468000 Sobic006G066400--Sobic001G468000 Sobic003G022900 Sobic003G022900 Sobic006G066400--Sobic003G022900 Sobic006G066400--Sobic010G212700 Sobic006G066400--Sobic010G180200 Sobic001G171100 Sobic001G171100 Sobic006G066400--Sobic001G171100 Sobic002G196500 Sobic002G196500 Sobic006G066400--Sobic002G196500 Sobic006G066400--Sobic002G366000 Sobic002G244600 Sobic002G244600 Sobic006G066400--Sobic002G244600 Sobic006G272800 Sobic006G272800 Sobic006G066400--Sobic006G272800 Sobic006G200901--Sobic002G343000 Sobic006G200901--Sobic006G143300 Sobic006G200901--Sobic004G014100 Sobic006G200901--Sobic009G148000 Sobic002G253900 Sobic002G253900 Sobic006G200901--Sobic002G253900 Sobic006G200901--Sobic003G217500 Sobic006G200901--Sobic006G186300 Sobic006G200901--Sobic002G230400 Sobic004G075700 Sobic004G075700 Sobic006G200901--Sobic004G075700 Sobic005G187400 Sobic005G187400 Sobic001G423300--Sobic005G187400 Sobic009G113100 Sobic009G113100 Sobic001G423300--Sobic009G113100 Sobic001G462401 Sobic001G462401 Sobic001G423300--Sobic001G462401 Sobic001G423300--Sobic009G254000 Sobic010G207400 Sobic010G207400 Sobic001G423300--Sobic010G207400 Sobic004G155800 Sobic004G155800 Sobic001G423300--Sobic004G155800 Sobic008G179800 Sobic008G179800 Sobic001G423300--Sobic008G179800 Sobic006G061100 Sobic006G061100 Sobic001G423300--Sobic006G061100 Sobic001G423300--Sobic004G075700 Sobic004G250600--Sobic007G023600 Sobic004G250600--Sobic006G261200 Sobic004G250600--Sobic003G217500 Sobic004G250600--Sobic001G170500 Sobic004G250600--Sobic003G304500 Sobic004G250600--Sobic006G186300 Sobic004G250600--Sobic008G179800 Sobic004G250600--Sobic010G207400 Sobic009G025100 Sobic009G025100 Sobic004G250600--Sobic009G025100
Octagon: transcription factors


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