Gene annotation
Transcriptome id Sobic.008G176900.1
Synonym Sb08g022080, DYAD, SWI1
Functional annotation expressed protein
UniProt A0A1Z5R7C4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G51330 : SWITCH1
RAP-DB (Rice) LOC_Os12g42830.1 : expressed protein
MaizeGDB (Corn) Zm00025a004759 , Zm00025a047218
Brachypodium KQK11083
Barley HORVU5Hr1G007060.1 , HORVU0Hr1G013080.1 , HORVU5Hr1G067420.3 , HORVU5Hr1G067420.1
Wheat TraesCS5A02G233600 , TraesCS5B02G232100 , TraesCS5D02G380600 , TraesCS5D02G380600 , TraesCS5B02G373300 , TraesCS5B02G373300 , TraesCS5B02G373300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G140300 expressed protein -
2 Sobic.001G467800 expressed protein -
3 Sobic.002G064900 FHA domain containing protein, putative, expressed -
4 Sobic.008G041900 expressed protein -
5 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
6 Sobic.001G399600 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
7 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
8 Sobic.007G167300 zinc-binding protein, putative, expressed -
9 Sobic.003G058100 kelch repeat-containing protein, putative, expressed -
10 Sobic.003G343200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
11 Sobic.001G083900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha-glucan phosphorylast isozyme, putative, expressed K00688: PYG, glycogen phosphorylase
12 Sobic.002G343000 expressed protein -
13 Sobic.001G273000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
14 Sobic.010G180200 transcription factor S-II, central domain containing protein, expressed -
15 Sobic.003G119900 inositol-1-monophosphatase, putative, expressed K18649: inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase / histidinol-phosphatase
16 Sobic.001G496600 expressed protein -
17 Sobic.002G366000 X8 domain containing protein, expressed -
18 Sobic.009G103900 myb-like DNA-binding domain containing protein, putative, expressed -
19 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
20 Sobic.004G041100 ATEXO70G1, putative, expressed K07195: EXOC7, exocyst complex component 7


Gene co-expression network
sample Sobic008G176900 Sobic008G176900 Sobic006G140300 Sobic006G140300 Sobic008G176900--Sobic006G140300 Sobic001G467800 Sobic001G467800 Sobic008G176900--Sobic001G467800 Sobic002G064900 Sobic002G064900 Sobic008G176900--Sobic002G064900 Sobic008G041900 Sobic008G041900 Sobic008G176900--Sobic008G041900 Sobic009G254000 Sobic009G254000 Sobic008G176900--Sobic009G254000 Sobic001G399600 Sobic001G399600 Sobic008G176900--Sobic001G399600 Sobic004G014100 Sobic004G014100 Sobic008G176900--Sobic004G014100 Sobic007G167300 Sobic007G167300 Sobic008G176900--Sobic007G167300 Sobic003G058100 Sobic003G058100 Sobic008G176900--Sobic003G058100 Sobic006G140300--Sobic004G014100 Sobic006G140300--Sobic009G254000 Sobic010G180200 Sobic010G180200 Sobic006G140300--Sobic010G180200 Sobic003G217500 Sobic003G217500 Sobic006G140300--Sobic003G217500 Sobic007G023600 Sobic007G023600 Sobic006G140300--Sobic007G023600 Sobic006G066400 Sobic006G066400 Sobic006G140300--Sobic006G066400 Sobic006G200901 Sobic006G200901 Sobic006G140300--Sobic006G200901 Sobic001G423300 Sobic001G423300 Sobic006G140300--Sobic001G423300 Sobic004G250600 Sobic004G250600 Sobic006G140300--Sobic004G250600 Sobic003G041900 Sobic003G041900 Sobic001G467800--Sobic003G041900 Sobic004G164700 Sobic004G164700 Sobic001G467800--Sobic004G164700 Sobic009G128800 Sobic009G128800 Sobic001G467800--Sobic009G128800 Sobic002G006100 Sobic002G006100 Sobic001G467800--Sobic002G006100 Sobic003G259300 Sobic003G259300 Sobic001G467800--Sobic003G259300 Sobic003G351900 Sobic003G351900 Sobic001G467800--Sobic003G351900 Sobic010G023400 Sobic010G023400 Sobic001G467800--Sobic010G023400 Sobic004G329000 Sobic004G329000 Sobic001G467800--Sobic004G329000 Sobic002G045200 Sobic002G045200 Sobic001G467800--Sobic002G045200 Sobic001G535600 Sobic001G535600 Sobic002G064900--Sobic001G535600 Sobic003G286900 Sobic003G286900 Sobic002G064900--Sobic003G286900 Sobic009G231100 Sobic009G231100 Sobic002G064900--Sobic009G231100 Sobic002G064900--Sobic008G176900 Sobic003G287000 Sobic003G287000 Sobic002G064900--Sobic003G287000 Sobic008G030900 Sobic008G030900 Sobic002G064900--Sobic008G030900 Sobic004G299700 Sobic004G299700 Sobic002G064900--Sobic004G299700 Sobic002G064900--Sobic001G423300 Sobic002G064900--Sobic006G140300 Sobic005G018050 Sobic005G018050 Sobic008G041900--Sobic005G018050 Sobic002G343000 Sobic002G343000 Sobic008G041900--Sobic002G343000 Sobic005G033700 Sobic005G033700 Sobic008G041900--Sobic005G033700 Sobic006G186300 Sobic006G186300 Sobic008G041900--Sobic006G186300 Sobic009G148000 Sobic009G148000 Sobic008G041900--Sobic009G148000 Sobic007G106300 Sobic007G106300 Sobic008G041900--Sobic007G106300 Sobic006G272800 Sobic006G272800 Sobic008G041900--Sobic006G272800 Sobic008G041900--Sobic010G180200 Sobic010G275800 Sobic010G275800 Sobic008G041900--Sobic010G275800 Sobic009G254000--Sobic006G140300 Sobic007G197100 Sobic007G197100 Sobic009G254000--Sobic007G197100 Sobic003G298900 Sobic003G298900 Sobic009G254000--Sobic003G298900 Sobic002G366000 Sobic002G366000 Sobic009G254000--Sobic002G366000 Sobic001G540700 Sobic001G540700 Sobic009G254000--Sobic001G540700 Sobic003G224700 Sobic003G224700 Sobic009G254000--Sobic003G224700 Sobic009G254000--Sobic002G006100 Sobic009G254000--Sobic004G250600 Sobic005G013300 Sobic005G013300 Sobic009G254000--Sobic005G013300 Sobic001G399600--Sobic010G180200 Sobic001G399600--Sobic006G140300 Sobic001G399600--Sobic007G167300 Sobic001G399600--Sobic004G014100 Sobic001G399600--Sobic009G254000 Sobic010G237800 Sobic010G237800 Sobic001G399600--Sobic010G237800 Sobic006G143300 Sobic006G143300 Sobic001G399600--Sobic006G143300 Sobic003G363300 Sobic003G363300 Sobic001G399600--Sobic003G363300 Sobic008G176300 Sobic008G176300 Sobic001G399600--Sobic008G176300 Sobic004G014100--Sobic002G343000 Sobic004G014100--Sobic006G200901 Sobic005G160200 Sobic005G160200 Sobic004G014100--Sobic005G160200 Sobic004G014100--Sobic006G143300 Sobic003G343200 Sobic003G343200 Sobic004G014100--Sobic003G343200 Sobic002G349000 Sobic002G349000 Sobic004G014100--Sobic002G349000 Sobic002G230400 Sobic002G230400 Sobic004G014100--Sobic002G230400 Sobic002G354800 Sobic002G354800 Sobic004G014100--Sobic002G354800 Sobic004G014100--Sobic006G140300 Sobic002G123100 Sobic002G123100 Sobic007G167300--Sobic002G123100 Sobic001G324800 Sobic001G324800 Sobic007G167300--Sobic001G324800 Sobic007G167300--Sobic002G349000 Sobic001G150300 Sobic001G150300 Sobic007G167300--Sobic001G150300 Sobic007G167300--Sobic004G014100 Sobic002G099866 Sobic002G099866 Sobic007G167300--Sobic002G099866 Sobic004G340566 Sobic004G340566 Sobic007G167300--Sobic004G340566 Sobic001G394900 Sobic001G394900 Sobic007G167300--Sobic001G394900 Sobic008G011400 Sobic008G011400 Sobic007G167300--Sobic008G011400 Sobic005G108225 Sobic005G108225 Sobic003G058100--Sobic005G108225 Sobic005G127900 Sobic005G127900 Sobic003G058100--Sobic005G127900 Sobic009G186001 Sobic009G186001 Sobic003G058100--Sobic009G186001 Sobic003G058100--Sobic008G176900 Sobic008G126500 Sobic008G126500 Sobic003G058100--Sobic008G126500 Sobic009G070250 Sobic009G070250 Sobic003G058100--Sobic009G070250 Sobic001G510300 Sobic001G510300 Sobic003G058100--Sobic001G510300 Sobic008G120132 Sobic008G120132 Sobic003G058100--Sobic008G120132 Sobic001G273000 Sobic001G273000 Sobic003G058100--Sobic001G273000
Octagon: transcription factors


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