Gene annotation
Transcriptome id Sobic.008G041900.1
Synonym Sb08g003600
Functional annotation expressed protein
UniProt C5YS58
Pfam -
Panther DB PTHR33177 PTHR33177:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11600 : -
RAP-DB (Rice) LOC_Os12g06130.1 : expressed protein
MaizeGDB (Corn) Zm00025a033530 , Zm00025a053938
Brachypodium -
Barley HORVU5Hr1G040360.2 , HORVU5Hr1G040360.3 , HORVU5Hr1G040360.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G018050 - -
2 Sobic.002G343000 expressed protein -
3 Sobic.005G033700 heavy-metal-associated domain-containing protein, putative, expressed -
4 Sobic.006G186300 fasciclin-like arabinogalactan protein, putative, expressed -
5 Sobic.009G148000 anthranilate phosphoribosyltransferase, putative, expressed -
6 Sobic.007G106300 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
7 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
8 Sobic.010G180200 transcription factor S-II, central domain containing protein, expressed -
9 Sobic.010G275800 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
10 Sobic.001G468000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF677 domain containing protein, putative, expressed -
11 Sobic.002G230400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
12 Sobic.002G122000 - -
13 Sobic.006G200901 - -
14 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
15 Sobic.009G116200 PHD finger protein, putative, expressed -
16 Sobic.009G103900 myb-like DNA-binding domain containing protein, putative, expressed -
17 Sobic.008G022200 RNA-binding zinc finger protein, putative, expressed -
18 Sobic.004G078500 Leucine Rich Repeat family protein, expressed -
19 Sobic.006G066400 cytochrome P450, putative, expressed K00517: indol-3-yl-methylglucosinolate hydroxylase
20 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -


Gene co-expression network
sample Sobic008G041900 Sobic008G041900 Sobic005G018050 Sobic005G018050 Sobic008G041900--Sobic005G018050 Sobic002G343000 Sobic002G343000 Sobic008G041900--Sobic002G343000 Sobic005G033700 Sobic005G033700 Sobic008G041900--Sobic005G033700 Sobic006G186300 Sobic006G186300 Sobic008G041900--Sobic006G186300 Sobic009G148000 Sobic009G148000 Sobic008G041900--Sobic009G148000 Sobic007G106300 Sobic007G106300 Sobic008G041900--Sobic007G106300 Sobic006G272800 Sobic006G272800 Sobic008G041900--Sobic006G272800 Sobic010G180200 Sobic010G180200 Sobic008G041900--Sobic010G180200 Sobic010G275800 Sobic010G275800 Sobic008G041900--Sobic010G275800 Sobic005G018050--Sobic008G041900 Sobic002G006100 Sobic002G006100 Sobic005G018050--Sobic002G006100 Sobic005G018050--Sobic002G343000 Sobic008G022200 Sobic008G022200 Sobic005G018050--Sobic008G022200 Sobic009G002200 Sobic009G002200 Sobic005G018050--Sobic009G002200 Sobic004G078500 Sobic004G078500 Sobic005G018050--Sobic004G078500 Sobic009G225500 Sobic009G225500 Sobic005G018050--Sobic009G225500 Sobic005G018050--Sobic006G272800 Sobic003G290400 Sobic003G290400 Sobic005G018050--Sobic003G290400 Sobic002G343000--Sobic009G148000 Sobic006G200901 Sobic006G200901 Sobic002G343000--Sobic006G200901 Sobic004G014100 Sobic004G014100 Sobic002G343000--Sobic004G014100 Sobic006G143300 Sobic006G143300 Sobic002G343000--Sobic006G143300 Sobic002G253900 Sobic002G253900 Sobic002G343000--Sobic002G253900 Sobic003G217500 Sobic003G217500 Sobic002G343000--Sobic003G217500 Sobic002G230400 Sobic002G230400 Sobic002G343000--Sobic002G230400 Sobic002G343000--Sobic008G041900 Sobic002G343000--Sobic006G186300 Sobic005G033700--Sobic006G143300 Sobic002G122000 Sobic002G122000 Sobic005G033700--Sobic002G122000 Sobic005G033700--Sobic006G186300 Sobic005G033700--Sobic008G041900 Sobic001G081800 Sobic001G081800 Sobic005G033700--Sobic001G081800 Sobic001G171100 Sobic001G171100 Sobic005G033700--Sobic001G171100 Sobic005G033700--Sobic006G200901 Sobic005G033700--Sobic002G343000 Sobic003G029900 Sobic003G029900 Sobic005G033700--Sobic003G029900 Sobic010G047300 Sobic010G047300 Sobic006G186300--Sobic010G047300 Sobic007G041200 Sobic007G041200 Sobic006G186300--Sobic007G041200 Sobic006G186300--Sobic002G122000 Sobic004G075700 Sobic004G075700 Sobic006G186300--Sobic004G075700 Sobic006G186300--Sobic002G230400 Sobic010G084800 Sobic010G084800 Sobic006G186300--Sobic010G084800 Sobic001G305100 Sobic001G305100 Sobic006G186300--Sobic001G305100 Sobic005G131800 Sobic005G131800 Sobic006G186300--Sobic005G131800 Sobic005G171800 Sobic005G171800 Sobic006G186300--Sobic005G171800 Sobic009G148000--Sobic002G343000 Sobic009G148000--Sobic002G253900 Sobic009G148000--Sobic006G200901 Sobic009G148000--Sobic006G186300 Sobic009G148000--Sobic003G217500 Sobic001G005800 Sobic001G005800 Sobic009G148000--Sobic001G005800 Sobic009G148000--Sobic004G014100 Sobic009G148000--Sobic008G041900 Sobic004G250600 Sobic004G250600 Sobic009G148000--Sobic004G250600 Sobic003G078400 Sobic003G078400 Sobic007G106300--Sobic003G078400 Sobic007G106300--Sobic008G041900 Sobic003G026900 Sobic003G026900 Sobic007G106300--Sobic003G026900 Sobic006G122300 Sobic006G122300 Sobic007G106300--Sobic006G122300 Sobic001G541400 Sobic001G541400 Sobic007G106300--Sobic001G541400 Sobic007G106300--Sobic005G018050 Sobic004G145300 Sobic004G145300 Sobic007G106300--Sobic004G145300 Sobic001G085200 Sobic001G085200 Sobic007G106300--Sobic001G085200 Sobic003G224700 Sobic003G224700 Sobic007G106300--Sobic003G224700 Sobic002G284100 Sobic002G284100 Sobic006G272800--Sobic002G284100 Sobic002G027600 Sobic002G027600 Sobic006G272800--Sobic002G027600 Sobic004G267600 Sobic004G267600 Sobic006G272800--Sobic004G267600 Sobic008G070700 Sobic008G070700 Sobic006G272800--Sobic008G070700 Sobic005G032600 Sobic005G032600 Sobic006G272800--Sobic005G032600 Sobic001G468000 Sobic001G468000 Sobic006G272800--Sobic001G468000 Sobic006G272800--Sobic002G006100 Sobic006G142500 Sobic006G142500 Sobic006G272800--Sobic006G142500 Sobic001G158300 Sobic001G158300 Sobic006G272800--Sobic001G158300 Sobic003G402100 Sobic003G402100 Sobic010G180200--Sobic003G402100 Sobic001G053700 Sobic001G053700 Sobic010G180200--Sobic001G053700 Sobic001G324800 Sobic001G324800 Sobic010G180200--Sobic001G324800 Sobic006G066400 Sobic006G066400 Sobic010G180200--Sobic006G066400 Sobic010G180200--Sobic004G014100 Sobic001G394900 Sobic001G394900 Sobic010G180200--Sobic001G394900 Sobic007G023600 Sobic007G023600 Sobic010G180200--Sobic007G023600 Sobic004G218000 Sobic004G218000 Sobic010G180200--Sobic004G218000 Sobic010G212700 Sobic010G212700 Sobic010G180200--Sobic010G212700 Sobic010G192500 Sobic010G192500 Sobic010G275800--Sobic010G192500 Sobic010G275800--Sobic005G032600 Sobic004G179800 Sobic004G179800 Sobic010G275800--Sobic004G179800 Sobic002G315500 Sobic002G315500 Sobic010G275800--Sobic002G315500 Sobic010G275800--Sobic009G225500 Sobic002G335900 Sobic002G335900 Sobic010G275800--Sobic002G335900 Sobic010G275800--Sobic006G142500 Sobic010G275800--Sobic002G027600 Sobic002G337600 Sobic002G337600 Sobic010G275800--Sobic002G337600
Octagon: transcription factors


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