Gene annotation
Transcriptome id Sobic.007G106300.5,Sobic.007G106300.2,Sobic.007G106300.4,Sobic.007G106300.3,Sobic.007G106300.1
Synonym Sb07g014930
Functional annotation nucleobase-ascorbate transporter, putative, expressed
UniProt A0A1B6PH17 , A0A1Z5R946 , C5YK77
Pfam PF00860
Panther DB PTHR11119 PTHR11119:SF47
NCBI CDD -
KEGG Orthology K14611; SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT2G34190 : Xanthine/uracil permease family protein
RAP-DB (Rice) LOC_Os09g15170.1 : nucleobase-ascorbate transporter, putative, expressed
MaizeGDB (Corn) Zm00025a029860 , Zm00025a013735
Brachypodium PNT67992 , KQJ98047
Barley -
Wheat TraesCS3D02G296200 , TraesCS3D02G296200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase, putative, expressed -
2 Sobic.008G041900 expressed protein -
3 Sobic.003G026900 expressed protein -
4 Sobic.006G122300 glycosyl hydrolase family 5 protein, putative, expressed -
5 Sobic.001G541400 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.005G018050 - -
7 Sobic.004G145300 OsFBD12 - F-box and FBD domain containing protein, expressed -
8 Sobic.001G085200 X8 domain containing protein, expressed -
9 Sobic.003G224700 glycosyltransferase family protein 1, putative, expressed -
10 Sobic.001G015700 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.006G118800 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.002G230400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
13 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
14 Sobic.006G186300 fasciclin-like arabinogalactan protein, putative, expressed -
15 Sobic.002G343000 expressed protein -
16 Sobic.009G116200 PHD finger protein, putative, expressed -
17 Sobic.004G078500 Leucine Rich Repeat family protein, expressed -
18 Sobic.001G183100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.002G213500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR37 - Auxin-responsive SAUR gene family member, expressed -
20 Sobic.005G052200 expressed protein -


Gene co-expression network
sample Sobic007G106300 Sobic007G106300 Sobic003G078400 Sobic003G078400 Sobic007G106300--Sobic003G078400 Sobic008G041900 Sobic008G041900 Sobic007G106300--Sobic008G041900 Sobic003G026900 Sobic003G026900 Sobic007G106300--Sobic003G026900 Sobic006G122300 Sobic006G122300 Sobic007G106300--Sobic006G122300 Sobic001G541400 Sobic001G541400 Sobic007G106300--Sobic001G541400 Sobic005G018050 Sobic005G018050 Sobic007G106300--Sobic005G018050 Sobic004G145300 Sobic004G145300 Sobic007G106300--Sobic004G145300 Sobic001G085200 Sobic001G085200 Sobic007G106300--Sobic001G085200 Sobic003G224700 Sobic003G224700 Sobic007G106300--Sobic003G224700 Sobic001G015700 Sobic001G015700 Sobic003G078400--Sobic001G015700 Sobic003G078400--Sobic006G122300 Sobic001G444500 Sobic001G444500 Sobic003G078400--Sobic001G444500 Sobic009G088700 Sobic009G088700 Sobic003G078400--Sobic009G088700 Sobic003G078400--Sobic007G106300 Sobic002G220700 Sobic002G220700 Sobic003G078400--Sobic002G220700 Sobic009G129700 Sobic009G129700 Sobic003G078400--Sobic009G129700 Sobic001G083500 Sobic001G083500 Sobic003G078400--Sobic001G083500 Sobic003G100700 Sobic003G100700 Sobic003G078400--Sobic003G100700 Sobic008G041900--Sobic005G018050 Sobic002G343000 Sobic002G343000 Sobic008G041900--Sobic002G343000 Sobic005G033700 Sobic005G033700 Sobic008G041900--Sobic005G033700 Sobic006G186300 Sobic006G186300 Sobic008G041900--Sobic006G186300 Sobic009G148000 Sobic009G148000 Sobic008G041900--Sobic009G148000 Sobic008G041900--Sobic007G106300 Sobic006G272800 Sobic006G272800 Sobic008G041900--Sobic006G272800 Sobic010G180200 Sobic010G180200 Sobic008G041900--Sobic010G180200 Sobic010G275800 Sobic010G275800 Sobic008G041900--Sobic010G275800 Sobic004G075700 Sobic004G075700 Sobic003G026900--Sobic004G075700 Sobic005G131800 Sobic005G131800 Sobic003G026900--Sobic005G131800 Sobic009G132650 Sobic009G132650 Sobic003G026900--Sobic009G132650 Sobic001G067000 Sobic001G067000 Sobic003G026900--Sobic001G067000 Sobic003G026900--Sobic006G186300 Sobic006G061100 Sobic006G061100 Sobic003G026900--Sobic006G061100 Sobic002G230400 Sobic002G230400 Sobic003G026900--Sobic002G230400 Sobic006G161300 Sobic006G161300 Sobic003G026900--Sobic006G161300 Sobic005G176875 Sobic005G176875 Sobic003G026900--Sobic005G176875 Sobic006G122300--Sobic001G015700 Sobic006G122300--Sobic003G078400 Sobic006G122300--Sobic002G220700 Sobic006G122300--Sobic009G088700 Sobic006G122300--Sobic007G106300 Sobic006G118800 Sobic006G118800 Sobic006G122300--Sobic006G118800 Sobic001G171200 Sobic001G171200 Sobic006G122300--Sobic001G171200 Sobic006G122300--Sobic001G083500 Sobic006G122300--Sobic001G444500 Sobic002G197800 Sobic002G197800 Sobic001G541400--Sobic002G197800 Sobic002G273000 Sobic002G273000 Sobic001G541400--Sobic002G273000 Sobic010G195450 Sobic010G195450 Sobic001G541400--Sobic010G195450 Sobic010G195301 Sobic010G195301 Sobic001G541400--Sobic010G195301 Sobic001G541400--Sobic001G085200 Sobic009G201100 Sobic009G201100 Sobic001G541400--Sobic009G201100 Sobic001G541400--Sobic005G176875 Sobic002G066000 Sobic002G066000 Sobic001G541400--Sobic002G066000 Sobic004G286301 Sobic004G286301 Sobic001G541400--Sobic004G286301 Sobic005G018050--Sobic008G041900 Sobic002G006100 Sobic002G006100 Sobic005G018050--Sobic002G006100 Sobic005G018050--Sobic002G343000 Sobic008G022200 Sobic008G022200 Sobic005G018050--Sobic008G022200 Sobic009G002200 Sobic009G002200 Sobic005G018050--Sobic009G002200 Sobic004G078500 Sobic004G078500 Sobic005G018050--Sobic004G078500 Sobic009G225500 Sobic009G225500 Sobic005G018050--Sobic009G225500 Sobic005G018050--Sobic006G272800 Sobic003G290400 Sobic003G290400 Sobic005G018050--Sobic003G290400 Sobic001G123100 Sobic001G123100 Sobic004G145300--Sobic001G123100 Sobic001G369800 Sobic001G369800 Sobic004G145300--Sobic001G369800 Sobic001G123300 Sobic001G123300 Sobic004G145300--Sobic001G123300 Sobic004G145300--Sobic003G224700 Sobic002G284100 Sobic002G284100 Sobic004G145300--Sobic002G284100 Sobic002G335500 Sobic002G335500 Sobic004G145300--Sobic002G335500 Sobic004G145300--Sobic002G006100 Sobic001G171100 Sobic001G171100 Sobic004G145300--Sobic001G171100 Sobic006G200901 Sobic006G200901 Sobic004G145300--Sobic006G200901 Sobic008G051500 Sobic008G051500 Sobic001G085200--Sobic008G051500 Sobic010G029800 Sobic010G029800 Sobic001G085200--Sobic010G029800 Sobic003G232332 Sobic003G232332 Sobic001G085200--Sobic003G232332 Sobic005G052200 Sobic005G052200 Sobic001G085200--Sobic005G052200 Sobic001G085200--Sobic001G541400 Sobic001G269650 Sobic001G269650 Sobic001G085200--Sobic001G269650 Sobic007G066200 Sobic007G066200 Sobic001G085200--Sobic007G066200 Sobic004G008700 Sobic004G008700 Sobic001G085200--Sobic004G008700 Sobic005G042400 Sobic005G042400 Sobic001G085200--Sobic005G042400 Sobic003G224700--Sobic001G123100 Sobic003G224700--Sobic004G145300 Sobic009G254000 Sobic009G254000 Sobic003G224700--Sobic009G254000 Sobic003G224700--Sobic001G123300 Sobic003G224700--Sobic007G106300 Sobic003G224700--Sobic002G343000 Sobic003G224700--Sobic002G284100 Sobic003G224700--Sobic001G369800 Sobic003G224700--Sobic006G200901
Octagon: transcription factors


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