Gene annotation
Transcriptome id Sobic.006G122300.1
Synonym Sb06g020270
Functional annotation glycosyl hydrolase family 5 protein, putative, expressed
UniProt C5YAS7
Pfam PF00150
Panther DB PTHR31263 PTHR31263:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G13130 : Cellulase (glycosyl hydrolase family 5) protein
RAP-DB (Rice) LOC_Os04g40510.1 : glycosyl hydrolase family 5 protein, putative, expressed
MaizeGDB (Corn) Zm00025a010978
Brachypodium KQJ83177
Barley HORVU2Hr1G083070.4 , HORVU2Hr1G083070.5 , HORVU2Hr1G083070.6 , HORVU2Hr1G083070.7 , HORVU2Hr1G083070.1 , HORVU2Hr1G083070.2 , HORVU2Hr1G083070.3 , HORVU2Hr1G083070.8 , HORVU2Hr1G083070.9 , HORVU2Hr1G083070.12 , HORVU2Hr1G083070.10 , HORVU2Hr1G083070.11
Wheat TraesCS2D02G338100 , TraesCS2A02G324800 , TraesCS2B02G357500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G015700 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.003G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase, putative, expressed -
3 Sobic.002G220700 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659855)@expressed protein -
4 Sobic.009G088700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cellulase, putative, expressed -
5 Sobic.007G106300 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
6 Sobic.006G118800 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.001G171200 expressed protein -
8 Sobic.001G083500 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.001G444500 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.009G129700 serine/threonine-protein kinase, putative, expressed -
11 Sobic.003G347100 - -
12 Sobic.001G123300 Os3bglu7 - beta-glucosidase, exo-beta-glucanse, expressed K05350: beta-glucosidase
13 Sobic.006G177000 cytochrome P450, putative, expressed K15398: fatty acid omega-hydroxylase
14 Sobic.003G091550 - -
15 Sobic.003G100700 serine/threonine-protein kinase, putative, expressed -
16 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
17 Sobic.001G033300 expansin precursor, putative, expressed -
18 Sobic.008G041900 expressed protein -
19 Sobic.001G452900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
20 Sobic.010G087700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein


Gene co-expression network
sample Sobic006G122300 Sobic006G122300 Sobic001G015700 Sobic001G015700 Sobic006G122300--Sobic001G015700 Sobic003G078400 Sobic003G078400 Sobic006G122300--Sobic003G078400 Sobic002G220700 Sobic002G220700 Sobic006G122300--Sobic002G220700 Sobic009G088700 Sobic009G088700 Sobic006G122300--Sobic009G088700 Sobic007G106300 Sobic007G106300 Sobic006G122300--Sobic007G106300 Sobic006G118800 Sobic006G118800 Sobic006G122300--Sobic006G118800 Sobic001G171200 Sobic001G171200 Sobic006G122300--Sobic001G171200 Sobic001G083500 Sobic001G083500 Sobic006G122300--Sobic001G083500 Sobic001G444500 Sobic001G444500 Sobic006G122300--Sobic001G444500 Sobic001G015700--Sobic006G122300 Sobic001G015700--Sobic003G078400 Sobic001G015700--Sobic002G220700 Sobic001G015700--Sobic001G171200 Sobic001G015700--Sobic009G088700 Sobic009G129700 Sobic009G129700 Sobic001G015700--Sobic009G129700 Sobic001G271600 Sobic001G271600 Sobic001G015700--Sobic001G271600 Sobic003G019900 Sobic003G019900 Sobic001G015700--Sobic003G019900 Sobic003G374100 Sobic003G374100 Sobic001G015700--Sobic003G374100 Sobic003G078400--Sobic001G015700 Sobic003G078400--Sobic006G122300 Sobic003G078400--Sobic001G444500 Sobic003G078400--Sobic009G088700 Sobic003G078400--Sobic007G106300 Sobic003G078400--Sobic002G220700 Sobic003G078400--Sobic009G129700 Sobic003G078400--Sobic001G083500 Sobic003G100700 Sobic003G100700 Sobic003G078400--Sobic003G100700 Sobic002G220700--Sobic009G088700 Sobic003G091550 Sobic003G091550 Sobic002G220700--Sobic003G091550 Sobic002G220700--Sobic001G015700 Sobic002G220700--Sobic006G122300 Sobic004G072900 Sobic004G072900 Sobic002G220700--Sobic004G072900 Sobic002G220700--Sobic003G078400 Sobic003G274000 Sobic003G274000 Sobic002G220700--Sobic003G274000 Sobic003G317700 Sobic003G317700 Sobic002G220700--Sobic003G317700 Sobic001G123300 Sobic001G123300 Sobic002G220700--Sobic001G123300 Sobic009G088700--Sobic002G220700 Sobic009G088700--Sobic001G083500 Sobic009G088700--Sobic003G100700 Sobic009G088700--Sobic001G015700 Sobic009G088700--Sobic003G078400 Sobic009G088700--Sobic003G091550 Sobic006G068200 Sobic006G068200 Sobic009G088700--Sobic006G068200 Sobic004G313200 Sobic004G313200 Sobic009G088700--Sobic004G313200 Sobic009G088700--Sobic006G122300 Sobic007G106300--Sobic003G078400 Sobic008G041900 Sobic008G041900 Sobic007G106300--Sobic008G041900 Sobic003G026900 Sobic003G026900 Sobic007G106300--Sobic003G026900 Sobic007G106300--Sobic006G122300 Sobic001G541400 Sobic001G541400 Sobic007G106300--Sobic001G541400 Sobic005G018050 Sobic005G018050 Sobic007G106300--Sobic005G018050 Sobic004G145300 Sobic004G145300 Sobic007G106300--Sobic004G145300 Sobic001G085200 Sobic001G085200 Sobic007G106300--Sobic001G085200 Sobic003G224700 Sobic003G224700 Sobic007G106300--Sobic003G224700 Sobic001G266300 Sobic001G266300 Sobic006G118800--Sobic001G266300 Sobic004G316200 Sobic004G316200 Sobic006G118800--Sobic004G316200 Sobic010G191301 Sobic010G191301 Sobic006G118800--Sobic010G191301 Sobic008G182100 Sobic008G182100 Sobic006G118800--Sobic008G182100 Sobic002G332500 Sobic002G332500 Sobic006G118800--Sobic002G332500 Sobic003G330800 Sobic003G330800 Sobic006G118800--Sobic003G330800 Sobic010G258900 Sobic010G258900 Sobic006G118800--Sobic010G258900 Sobic003G139400 Sobic003G139400 Sobic006G118800--Sobic003G139400 Sobic003G129100 Sobic003G129100 Sobic006G118800--Sobic003G129100 Sobic004G220200 Sobic004G220200 Sobic001G171200--Sobic004G220200 Sobic006G097300 Sobic006G097300 Sobic001G171200--Sobic006G097300 Sobic007G128200 Sobic007G128200 Sobic001G171200--Sobic007G128200 Sobic004G234600 Sobic004G234600 Sobic001G171200--Sobic004G234600 Sobic002G121900 Sobic002G121900 Sobic001G171200--Sobic002G121900 Sobic007G193300 Sobic007G193300 Sobic001G171200--Sobic007G193300 Sobic010G194600 Sobic010G194600 Sobic001G171200--Sobic010G194600 Sobic001G086400 Sobic001G086400 Sobic001G171200--Sobic001G086400 Sobic001G457600 Sobic001G457600 Sobic001G171200--Sobic001G457600 Sobic001G083500--Sobic004G313200 Sobic002G335900 Sobic002G335900 Sobic001G083500--Sobic002G335900 Sobic001G083500--Sobic009G088700 Sobic002G337600 Sobic002G337600 Sobic001G083500--Sobic002G337600 Sobic001G074000 Sobic001G074000 Sobic001G083500--Sobic001G074000 Sobic002G160800 Sobic002G160800 Sobic001G083500--Sobic002G160800 Sobic001G452900 Sobic001G452900 Sobic001G083500--Sobic001G452900 Sobic001G083500--Sobic003G100700 Sobic001G199400 Sobic001G199400 Sobic001G083500--Sobic001G199400 Sobic001G444500--Sobic003G078400 Sobic001G444500--Sobic001G015700 Sobic001G444500--Sobic009G129700 Sobic005G104100 Sobic005G104100 Sobic001G444500--Sobic005G104100 Sobic005G156100 Sobic005G156100 Sobic001G444500--Sobic005G156100 Sobic001G444500--Sobic006G122300 Sobic001G444500--Sobic009G088700 Sobic003G070600 Sobic003G070600 Sobic001G444500--Sobic003G070600 Sobic001G444500--Sobic001G083500
Octagon: transcription factors


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