Gene annotation
Transcriptome id Sobic.002G220700.1,Sobic.002G220700.2
Synonym Sb02g026180
Functional annotation GS9(Ortholog in rice:Zhao et al.(2018)) (PubMedID : 31659855)
expressed protein
UniProt A0A1B6QCU3 , A0A1B6QCW1
Pfam -
Panther DB PTHR33385 PTHR33385:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14630 : -
RAP-DB (Rice) LOC_Os09g27590.1 : expressed protein
MaizeGDB (Corn) Zm00025a014051 , Zm00025a047212
Brachypodium PNT64696 , KQJ90464
Barley HORVU5Hr1G067390.14 , HORVU5Hr1G067390.12 , HORVU5Hr1G067390.13 , HORVU5Hr1G067390.10 , HORVU5Hr1G067390.11 , HORVU5Hr1G067390.8 , HORVU5Hr1G067390.9 , HORVU5Hr1G067390.5 , HORVU5Hr1G067390.1 , HORVU5Hr1G067390.2
Wheat TraesCS5A02G233400 , TraesCS5A02G233400 , TraesCS5A02G233400 , TraesCS5B02G231900 , TraesCS5D02G240300 , TraesCS5D02G240300
Populus -


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cDNA sequences
Sobic.002G220700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G088700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cellulase, putative, expressed -
2 Sobic.003G091550 - -
3 Sobic.001G015700 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.006G122300 glycosyl hydrolase family 5 protein, putative, expressed -
5 Sobic.004G072900 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.003G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase, putative, expressed -
7 Sobic.003G274000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.003G317700 cyclic nucleotide-gated ion channel 2, putative, expressed -
9 Sobic.001G123300 Os3bglu7 - beta-glucosidase, exo-beta-glucanse, expressed K05350: beta-glucosidase
10 Sobic.008G031000 LTPL26 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.002G121900 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
12 Sobic.003G374100 beta-galactosidase precursor, putative, expressed -
13 Sobic.006G111100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
14 Sobic.001G171200 expressed protein -
15 Sobic.006G228000 glycine-rich protein 2, putative -
16 Sobic.010G204700 LTPL129 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.001G287900 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
18 Sobic.001G183300 methyl-CpG binding domain containing protein, expressed -
19 Sobic.006G118800 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.010G087700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein


Gene co-expression network
sample Sobic002G220700 Sobic002G220700 Sobic009G088700 Sobic009G088700 Sobic002G220700--Sobic009G088700 Sobic003G091550 Sobic003G091550 Sobic002G220700--Sobic003G091550 Sobic001G015700 Sobic001G015700 Sobic002G220700--Sobic001G015700 Sobic006G122300 Sobic006G122300 Sobic002G220700--Sobic006G122300 Sobic004G072900 Sobic004G072900 Sobic002G220700--Sobic004G072900 Sobic003G078400 Sobic003G078400 Sobic002G220700--Sobic003G078400 Sobic003G274000 Sobic003G274000 Sobic002G220700--Sobic003G274000 Sobic003G317700 Sobic003G317700 Sobic002G220700--Sobic003G317700 Sobic001G123300 Sobic001G123300 Sobic002G220700--Sobic001G123300 Sobic009G088700--Sobic002G220700 Sobic001G083500 Sobic001G083500 Sobic009G088700--Sobic001G083500 Sobic003G100700 Sobic003G100700 Sobic009G088700--Sobic003G100700 Sobic009G088700--Sobic001G015700 Sobic009G088700--Sobic003G078400 Sobic009G088700--Sobic003G091550 Sobic006G068200 Sobic006G068200 Sobic009G088700--Sobic006G068200 Sobic004G313200 Sobic004G313200 Sobic009G088700--Sobic004G313200 Sobic009G088700--Sobic006G122300 Sobic003G091550--Sobic002G220700 Sobic002G121900 Sobic002G121900 Sobic003G091550--Sobic002G121900 Sobic003G091550--Sobic003G274000 Sobic003G091550--Sobic009G088700 Sobic004G215500 Sobic004G215500 Sobic003G091550--Sobic004G215500 Sobic002G263000 Sobic002G263000 Sobic003G091550--Sobic002G263000 Sobic010G087700 Sobic010G087700 Sobic003G091550--Sobic010G087700 Sobic006G228000 Sobic006G228000 Sobic003G091550--Sobic006G228000 Sobic006G111100 Sobic006G111100 Sobic003G091550--Sobic006G111100 Sobic001G015700--Sobic006G122300 Sobic001G015700--Sobic003G078400 Sobic001G015700--Sobic002G220700 Sobic001G171200 Sobic001G171200 Sobic001G015700--Sobic001G171200 Sobic001G015700--Sobic009G088700 Sobic009G129700 Sobic009G129700 Sobic001G015700--Sobic009G129700 Sobic001G271600 Sobic001G271600 Sobic001G015700--Sobic001G271600 Sobic003G019900 Sobic003G019900 Sobic001G015700--Sobic003G019900 Sobic003G374100 Sobic003G374100 Sobic001G015700--Sobic003G374100 Sobic006G122300--Sobic001G015700 Sobic006G122300--Sobic003G078400 Sobic006G122300--Sobic002G220700 Sobic006G122300--Sobic009G088700 Sobic007G106300 Sobic007G106300 Sobic006G122300--Sobic007G106300 Sobic006G118800 Sobic006G118800 Sobic006G122300--Sobic006G118800 Sobic006G122300--Sobic001G171200 Sobic006G122300--Sobic001G083500 Sobic001G444500 Sobic001G444500 Sobic006G122300--Sobic001G444500 Sobic008G031000 Sobic008G031000 Sobic004G072900--Sobic008G031000 Sobic004G072900--Sobic003G274000 Sobic001G287900 Sobic001G287900 Sobic004G072900--Sobic001G287900 Sobic001G324600 Sobic001G324600 Sobic004G072900--Sobic001G324600 Sobic001G152901 Sobic001G152901 Sobic004G072900--Sobic001G152901 Sobic007G217800 Sobic007G217800 Sobic004G072900--Sobic007G217800 Sobic008G048600 Sobic008G048600 Sobic004G072900--Sobic008G048600 Sobic003G411100 Sobic003G411100 Sobic004G072900--Sobic003G411100 Sobic004G195400 Sobic004G195400 Sobic004G072900--Sobic004G195400 Sobic003G078400--Sobic001G015700 Sobic003G078400--Sobic006G122300 Sobic003G078400--Sobic001G444500 Sobic003G078400--Sobic009G088700 Sobic003G078400--Sobic007G106300 Sobic003G078400--Sobic002G220700 Sobic003G078400--Sobic009G129700 Sobic003G078400--Sobic001G083500 Sobic003G078400--Sobic003G100700 Sobic003G274000--Sobic008G031000 Sobic006G131100 Sobic006G131100 Sobic003G274000--Sobic006G131100 Sobic003G274000--Sobic003G411100 Sobic003G274000--Sobic008G048600 Sobic003G274000--Sobic001G324600 Sobic003G274000--Sobic001G287900 Sobic006G144101 Sobic006G144101 Sobic003G274000--Sobic006G144101 Sobic004G014700 Sobic004G014700 Sobic003G274000--Sobic004G014700 Sobic002G345500 Sobic002G345500 Sobic003G274000--Sobic002G345500 Sobic003G317700--Sobic001G287900 Sobic008G138200 Sobic008G138200 Sobic003G317700--Sobic008G138200 Sobic010G118900 Sobic010G118900 Sobic003G317700--Sobic010G118900 Sobic004G254100 Sobic004G254100 Sobic003G317700--Sobic004G254100 Sobic003G317700--Sobic002G121900 Sobic007G043000 Sobic007G043000 Sobic003G317700--Sobic007G043000 Sobic003G317700--Sobic007G217800 Sobic003G317700--Sobic003G374100 Sobic002G053350 Sobic002G053350 Sobic003G317700--Sobic002G053350 Sobic003G208800 Sobic003G208800 Sobic001G123300--Sobic003G208800 Sobic001G123100 Sobic001G123100 Sobic001G123300--Sobic001G123100 Sobic004G145300 Sobic004G145300 Sobic001G123300--Sobic004G145300 Sobic001G081100 Sobic001G081100 Sobic001G123300--Sobic001G081100 Sobic002G284100 Sobic002G284100 Sobic001G123300--Sobic002G284100 Sobic001G171100 Sobic001G171100 Sobic001G123300--Sobic001G171100 Sobic001G123300--Sobic002G220700 Sobic010G212700 Sobic010G212700 Sobic001G123300--Sobic010G212700 Sobic006G263400 Sobic006G263400 Sobic001G123300--Sobic006G263400
Octagon: transcription factors


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