Gene annotation
Transcriptome id Sobic.003G091550.1
Synonym -
Functional annotation -
UniProt A0A1W0VWE1
Pfam -
Panther DB PTHR10315 PTHR10315:SF46
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007275; multicellular organism development GO:0006511ubiquitin-dependent protein catabolic process GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT5G37930 : Protein with RING/U-box and TRAF-like domains
RAP-DB (Rice) LOC_Os01g03170.1 : seven in absentia protein family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G220700 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659855)@expressed protein -
2 Sobic.002G121900 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
3 Sobic.003G274000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.009G088700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cellulase, putative, expressed -
5 Sobic.004G215500 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.002G263000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
7 Sobic.010G087700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
8 Sobic.006G228000 glycine-rich protein 2, putative -
9 Sobic.006G111100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
10 Sobic.002G027300 ZOS1-07 - C2H2 zinc finger protein, expressed -
11 Sobic.002G032100 - -
12 Sobic.001G086400 OsMADS34 - MADS-box family gene with MIKCc type-box, expressed -
13 Sobic.003G374100 beta-galactosidase precursor, putative, expressed -
14 Sobic.001G152901 "YABBY transcription factor, "(PubMedID : 22581231) -
15 Sobic.001G137800 ankyrin, putative, expressed -
16 Sobic.010G087600 heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
17 Sobic.004G072900 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.007G043000 transcription factor X1, putative, expressed -
19 Sobic.001G171200 expressed protein -
20 Sobic.001G183300 methyl-CpG binding domain containing protein, expressed -


Gene co-expression network
sample Sobic003G091550 Sobic003G091550 Sobic002G220700 Sobic002G220700 Sobic003G091550--Sobic002G220700 Sobic002G121900 Sobic002G121900 Sobic003G091550--Sobic002G121900 Sobic003G274000 Sobic003G274000 Sobic003G091550--Sobic003G274000 Sobic009G088700 Sobic009G088700 Sobic003G091550--Sobic009G088700 Sobic004G215500 Sobic004G215500 Sobic003G091550--Sobic004G215500 Sobic002G263000 Sobic002G263000 Sobic003G091550--Sobic002G263000 Sobic010G087700 Sobic010G087700 Sobic003G091550--Sobic010G087700 Sobic006G228000 Sobic006G228000 Sobic003G091550--Sobic006G228000 Sobic006G111100 Sobic006G111100 Sobic003G091550--Sobic006G111100 Sobic002G220700--Sobic009G088700 Sobic002G220700--Sobic003G091550 Sobic001G015700 Sobic001G015700 Sobic002G220700--Sobic001G015700 Sobic006G122300 Sobic006G122300 Sobic002G220700--Sobic006G122300 Sobic004G072900 Sobic004G072900 Sobic002G220700--Sobic004G072900 Sobic003G078400 Sobic003G078400 Sobic002G220700--Sobic003G078400 Sobic002G220700--Sobic003G274000 Sobic003G317700 Sobic003G317700 Sobic002G220700--Sobic003G317700 Sobic001G123300 Sobic001G123300 Sobic002G220700--Sobic001G123300 Sobic007G043000 Sobic007G043000 Sobic002G121900--Sobic007G043000 Sobic001G287900 Sobic001G287900 Sobic002G121900--Sobic001G287900 Sobic001G137800 Sobic001G137800 Sobic002G121900--Sobic001G137800 Sobic007G128200 Sobic007G128200 Sobic002G121900--Sobic007G128200 Sobic001G235100 Sobic001G235100 Sobic002G121900--Sobic001G235100 Sobic007G193300 Sobic007G193300 Sobic002G121900--Sobic007G193300 Sobic008G138200 Sobic008G138200 Sobic002G121900--Sobic008G138200 Sobic003G374100 Sobic003G374100 Sobic002G121900--Sobic003G374100 Sobic001G171200 Sobic001G171200 Sobic002G121900--Sobic001G171200 Sobic008G031000 Sobic008G031000 Sobic003G274000--Sobic008G031000 Sobic006G131100 Sobic006G131100 Sobic003G274000--Sobic006G131100 Sobic003G411100 Sobic003G411100 Sobic003G274000--Sobic003G411100 Sobic008G048600 Sobic008G048600 Sobic003G274000--Sobic008G048600 Sobic001G324600 Sobic001G324600 Sobic003G274000--Sobic001G324600 Sobic003G274000--Sobic001G287900 Sobic006G144101 Sobic006G144101 Sobic003G274000--Sobic006G144101 Sobic004G014700 Sobic004G014700 Sobic003G274000--Sobic004G014700 Sobic002G345500 Sobic002G345500 Sobic003G274000--Sobic002G345500 Sobic009G088700--Sobic002G220700 Sobic001G083500 Sobic001G083500 Sobic009G088700--Sobic001G083500 Sobic003G100700 Sobic003G100700 Sobic009G088700--Sobic003G100700 Sobic009G088700--Sobic001G015700 Sobic009G088700--Sobic003G078400 Sobic009G088700--Sobic003G091550 Sobic006G068200 Sobic006G068200 Sobic009G088700--Sobic006G068200 Sobic004G313200 Sobic004G313200 Sobic009G088700--Sobic004G313200 Sobic009G088700--Sobic006G122300 Sobic001G183200 Sobic001G183200 Sobic004G215500--Sobic001G183200 Sobic002G027300 Sobic002G027300 Sobic004G215500--Sobic002G027300 Sobic002G032100 Sobic002G032100 Sobic004G215500--Sobic002G032100 Sobic001G200800 Sobic001G200800 Sobic004G215500--Sobic001G200800 Sobic005G190300 Sobic005G190300 Sobic004G215500--Sobic005G190300 Sobic002G103000 Sobic002G103000 Sobic004G215500--Sobic002G103000 Sobic008G123350 Sobic008G123350 Sobic004G215500--Sobic008G123350 Sobic007G125600 Sobic007G125600 Sobic004G215500--Sobic007G125600 Sobic010G121800 Sobic010G121800 Sobic004G215500--Sobic010G121800 Sobic001G086400 Sobic001G086400 Sobic002G263000--Sobic001G086400 Sobic002G263000--Sobic001G171200 Sobic002G263000--Sobic002G121900 Sobic001G137400 Sobic001G137400 Sobic002G263000--Sobic001G137400 Sobic004G220200 Sobic004G220200 Sobic002G263000--Sobic004G220200 Sobic010G194600 Sobic010G194600 Sobic002G263000--Sobic010G194600 Sobic002G263000--Sobic003G091550 Sobic003G022900 Sobic003G022900 Sobic002G263000--Sobic003G022900 Sobic009G219500 Sobic009G219500 Sobic002G263000--Sobic009G219500 Sobic010G087600 Sobic010G087600 Sobic010G087700--Sobic010G087600 Sobic001G108100 Sobic001G108100 Sobic010G087700--Sobic001G108100 Sobic002G360600 Sobic002G360600 Sobic010G087700--Sobic002G360600 Sobic004G215400 Sobic004G215400 Sobic010G087700--Sobic004G215400 Sobic008G008100 Sobic008G008100 Sobic010G087700--Sobic008G008100 Sobic006G107500 Sobic006G107500 Sobic010G087700--Sobic006G107500 Sobic010G087700--Sobic006G068200 Sobic010G087700--Sobic003G091550 Sobic002G335900 Sobic002G335900 Sobic010G087700--Sobic002G335900 Sobic006G228000--Sobic001G137800 Sobic006G228000--Sobic003G374100 Sobic006G228000--Sobic007G043000 Sobic001G235200 Sobic001G235200 Sobic006G228000--Sobic001G235200 Sobic002G237000 Sobic002G237000 Sobic006G228000--Sobic002G237000 Sobic004G234600 Sobic004G234600 Sobic006G228000--Sobic004G234600 Sobic003G092300 Sobic003G092300 Sobic006G228000--Sobic003G092300 Sobic003G300000 Sobic003G300000 Sobic006G228000--Sobic003G300000 Sobic006G228000--Sobic002G121900 Sobic006G111100--Sobic003G374100 Sobic006G111100--Sobic003G274000 Sobic006G111100--Sobic002G121900 Sobic010G156100 Sobic010G156100 Sobic006G111100--Sobic010G156100 Sobic004G101200 Sobic004G101200 Sobic006G111100--Sobic004G101200 Sobic006G111100--Sobic004G072900 Sobic001G152901 Sobic001G152901 Sobic006G111100--Sobic001G152901 Sobic006G111100--Sobic001G287900 Sobic006G111100--Sobic001G137800
Octagon: transcription factors


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