Gene annotation
Transcriptome id Sobic.004G215500.2,Sobic.004G215500.1
Synonym ATLTL1, Sb04g026060, LTL1
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt A0A1Z5RNJ4 , A0A1Z5RNK3
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF248
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT3G04290 : Li-tolerant lipase 1
RAP-DB (Rice) LOC_Os02g40440.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a006692 , Zm00025a031980 , Zm00025a022598 , Zm00025a010740 , Zm00025a056452 , Zm00025a032811
Brachypodium KQK01341 , PNT69075 , KQK00356 , KQJ96982 , KQJ83478 , KQJ94709
Barley HORVU1Hr1G038730.10 , HORVU6Hr1G057590.10 , HORVU6Hr1G090370.2 , HORVU6Hr1G090370.1 , HORVU2Hr1G087830.1 , HORVU2Hr1G087830.2 , HORVU6Hr1G090390.1 , HORVU6Hr1G090390.3 , HORVU6Hr1G090390.2 , HORVU5Hr1G068460.6 , HORVU5Hr1G068460.5 , HORVU5Hr1G068460.3 , HORVU5Hr1G068460.2 , HORVU5Hr1G068460.1 , HORVU6Hr1G057590.8 , HORVU6Hr1G057590.9 , HORVU6Hr1G057590.6 , HORVU6Hr1G057590.7 , HORVU6Hr1G057590.4 , HORVU6Hr1G057590.5 , HORVU6Hr1G057590.2 , HORVU6Hr1G057590.3 , HORVU6Hr1G057590.1 , HORVU1Hr1G038730.2 , HORVU1Hr1G038730.3 , HORVU1Hr1G038730.1 , HORVU1Hr1G038730.6 , HORVU1Hr1G038730.7 , HORVU1Hr1G038730.4 , HORVU1Hr1G038730.5 , HORVU1Hr1G038730.8 , HORVU1Hr1G038730.9
Wheat TraesCS2A02G362700 , TraesCS6D02G206800 , TraesCS6D02G206800 , TraesCS6B02G427200 , TraesCS6A02G387900 , TraesCS1B02G162500 , TraesCS6A02G228200 , TraesCS2A02G365300 , TraesCS6B02G253500 , TraesCS6B02G253500 , TraesCS5A02G238300 , TraesCS1D02G144200 , TraesCS1D02G144200 , TraesCS2B02G380600 , TraesCS6D02G372000 , TraesCS5B02G236800 , TraesCS2D02G044400 , TraesCS6A02G387800 , TraesCS2A02G045800 , TraesCS1A02G145300 , TraesCS1A02G145300 , TraesCS2D02G360100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G183200 methyl-CpG binding domain containing protein, expressed -
2 Sobic.002G027300 ZOS1-07 - C2H2 zinc finger protein, expressed -
3 Sobic.002G032100 - -
4 Sobic.001G200800 LTPL160 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.005G190300 - -
6 Sobic.002G103000 PME/invertase inhibitor, putative, expressed -
7 Sobic.008G123350 - -
8 Sobic.007G125600 expressed protein -
9 Sobic.010G121800 expansin precursor, putative, expressed -
10 Sobic.008G143200 - -
11 Sobic.002G332000 CRP8 - Cysteine-rich family protein precursor, expressed -
12 Sobic.003G274000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.005G070800 - -
14 Sobic.006G021500 response regulator receiver domain containing protein, expressed -
15 Sobic.008G122300 OsSub63 - Putative Subtilisin homologue, expressed -
16 Sobic.008G120200 - -
17 Sobic.001G209701 - -
18 Sobic.001G209701 - -
19 Sobic.001G209701 - -
20 Sobic.001G209701 - -


Gene co-expression network
sample Sobic004G215500 Sobic004G215500 Sobic001G183200 Sobic001G183200 Sobic004G215500--Sobic001G183200 Sobic002G027300 Sobic002G027300 Sobic004G215500--Sobic002G027300 Sobic002G032100 Sobic002G032100 Sobic004G215500--Sobic002G032100 Sobic001G200800 Sobic001G200800 Sobic004G215500--Sobic001G200800 Sobic005G190300 Sobic005G190300 Sobic004G215500--Sobic005G190300 Sobic002G103000 Sobic002G103000 Sobic004G215500--Sobic002G103000 Sobic008G123350 Sobic008G123350 Sobic004G215500--Sobic008G123350 Sobic007G125600 Sobic007G125600 Sobic004G215500--Sobic007G125600 Sobic010G121800 Sobic010G121800 Sobic004G215500--Sobic010G121800 Sobic001G183200--Sobic001G200800 Sobic001G183200--Sobic002G103000 Sobic001G209701 Sobic001G209701 Sobic001G183200--Sobic001G209701 Sobic002G027300--Sobic002G027300 Sobic006G068200 Sobic006G068200 Sobic002G027300--Sobic006G068200 Sobic004G215400 Sobic004G215400 Sobic002G027300--Sobic004G215400 Sobic002G027300--Sobic004G215500 Sobic005G180000 Sobic005G180000 Sobic002G027300--Sobic005G180000 Sobic001G273200 Sobic001G273200 Sobic002G027300--Sobic001G273200 Sobic005G179800 Sobic005G179800 Sobic002G027300--Sobic005G179800 Sobic003G347100 Sobic003G347100 Sobic002G027300--Sobic003G347100 Sobic006G185600 Sobic006G185600 Sobic002G027300--Sobic006G185600 Sobic002G032100--Sobic002G027300 Sobic002G032100--Sobic006G068200 Sobic002G032100--Sobic004G215400 Sobic002G032100--Sobic004G215500 Sobic002G032100--Sobic005G180000 Sobic002G032100--Sobic001G273200 Sobic002G032100--Sobic005G179800 Sobic002G032100--Sobic003G347100 Sobic002G032100--Sobic006G185600 Sobic001G200800--Sobic002G103000 Sobic008G143200 Sobic008G143200 Sobic001G200800--Sobic008G143200 Sobic001G200800--Sobic010G121800 Sobic002G332000 Sobic002G332000 Sobic001G200800--Sobic002G332000 Sobic001G200800--Sobic001G209701 Sobic005G190300--Sobic008G123350 Sobic005G190300--Sobic010G121800 Sobic005G190300--Sobic002G332000 Sobic005G190300--Sobic001G200800 Sobic005G190300--Sobic008G143200 Sobic005G190300--Sobic002G103000 Sobic008G122300 Sobic008G122300 Sobic005G190300--Sobic008G122300 Sobic005G190300--Sobic001G209701 Sobic002G103000--Sobic008G143200 Sobic002G103000--Sobic001G200800 Sobic002G103000--Sobic001G209701 Sobic008G123350--Sobic005G190300 Sobic008G123350--Sobic010G121800 Sobic008G123350--Sobic001G200800 Sobic008G123350--Sobic002G332000 Sobic008G123350--Sobic008G143200 Sobic008G123350--Sobic002G103000 Sobic007G040400 Sobic007G040400 Sobic008G123350--Sobic007G040400 Sobic005G147400 Sobic005G147400 Sobic008G123350--Sobic005G147400 Sobic005G196400 Sobic005G196400 Sobic008G123350--Sobic005G196400 Sobic002G076600 Sobic002G076600 Sobic007G125600--Sobic002G076600 Sobic005G070800 Sobic005G070800 Sobic007G125600--Sobic005G070800 Sobic001G152901 Sobic001G152901 Sobic007G125600--Sobic001G152901 Sobic007G125600--Sobic008G123350 Sobic007G125600--Sobic005G190300 Sobic006G163200 Sobic006G163200 Sobic007G125600--Sobic006G163200 Sobic007G125600--Sobic004G215500 Sobic002G096400 Sobic002G096400 Sobic007G125600--Sobic002G096400 Sobic008G143300 Sobic008G143300 Sobic007G125600--Sobic008G143300 Sobic010G121800--Sobic008G143200 Sobic010G121800--Sobic002G332000 Sobic010G121800--Sobic002G103000 Sobic010G121800--Sobic001G200800 Sobic010G121800--Sobic001G209701
Octagon: transcription factors


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