Gene annotation
Transcriptome id Sobic.004G072900.1
Synonym Sb04g006070
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt A0A1Z5RLI2
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF193
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT2G42990 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os02g09620.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a007609 , Zm00025a019368 , Zm00025a019369 , Zm00025a051438 , Zm00025a042085
Brachypodium KQK06198 , KQJ93760 , KQK17563 , PNT66062
Barley HORVU7Hr1G092040.8 , HORVU7Hr1G092040.2 , HORVU7Hr1G092040.3 , HORVU7Hr1G092040.1 , HORVU7Hr1G092040.6 , HORVU7Hr1G092040.7 , HORVU7Hr1G092040.4 , HORVU7Hr1G092040.5 , HORVU6Hr1G035210.1 , HORVU6Hr1G035210.3 , HORVU6Hr1G035210.2 , HORVU6Hr1G035210.4
Wheat TraesCS6A02G172800 , TraesCS4B02G027100 , TraesCS6D02G161900 , TraesCS7D02G384600 , TraesCS4A02G285700 , TraesCS7A02G388700 , TraesCS7A02G388700 , TraesCS6A02G172900 , TraesCS7B02G290600 , TraesCS4D02G024900 , TraesCS6B02G200500 , TraesCS6B02G200400 , TraesCS6D02G162000 , TraesCS6D02G162000 , TraesCS6D02G162000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G031000 LTPL26 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.003G274000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.001G287900 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
4 Sobic.001G324600 cysteine proteinase inhibitor 8 precursor, putative, expressed -
5 Sobic.001G152901 "YABBY transcription factor, "(PubMedID : 22581231) -
6 Sobic.007G217800 expressed protein -
7 Sobic.008G048600 - -
8 Sobic.003G411100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
9 Sobic.004G195400 heavy metal associated domain containing protein, expressed -
10 Sobic.004G014700 THION20 - Plant thionin family protein precursor, putative, expressed -
11 Sobic.006G111100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
12 Sobic.006G131100 - -
13 Sobic.003G044800 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
14 Sobic.010G118900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
15 Sobic.008G138200 RNA recognition motif family protein, expressed -
16 Sobic.006G144101 - -
17 Sobic.002G345500 DEF3 - Defensin and Defensin-like DEFL family, expressed -
18 Sobic.006G189500 OsMADS17 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
19 Sobic.001G009100 expressed protein -
20 Sobic.002G053201 - -


Gene co-expression network
sample Sobic004G072900 Sobic004G072900 Sobic008G031000 Sobic008G031000 Sobic004G072900--Sobic008G031000 Sobic003G274000 Sobic003G274000 Sobic004G072900--Sobic003G274000 Sobic001G287900 Sobic001G287900 Sobic004G072900--Sobic001G287900 Sobic001G324600 Sobic001G324600 Sobic004G072900--Sobic001G324600 Sobic001G152901 Sobic001G152901 Sobic004G072900--Sobic001G152901 Sobic007G217800 Sobic007G217800 Sobic004G072900--Sobic007G217800 Sobic008G048600 Sobic008G048600 Sobic004G072900--Sobic008G048600 Sobic003G411100 Sobic003G411100 Sobic004G072900--Sobic003G411100 Sobic004G195400 Sobic004G195400 Sobic004G072900--Sobic004G195400 Sobic003G245500 Sobic003G245500 Sobic008G031000--Sobic003G245500 Sobic002G053201 Sobic002G053201 Sobic008G031000--Sobic002G053201 Sobic002G094900 Sobic002G094900 Sobic008G031000--Sobic002G094900 Sobic008G031000--Sobic001G324600 Sobic009G078600 Sobic009G078600 Sobic008G031000--Sobic009G078600 Sobic007G024100 Sobic007G024100 Sobic008G031000--Sobic007G024100 Sobic008G182200 Sobic008G182200 Sobic008G031000--Sobic008G182200 Sobic002G162200 Sobic002G162200 Sobic008G031000--Sobic002G162200 Sobic008G071200 Sobic008G071200 Sobic008G031000--Sobic008G071200 Sobic003G274000--Sobic008G031000 Sobic006G131100 Sobic006G131100 Sobic003G274000--Sobic006G131100 Sobic003G274000--Sobic003G411100 Sobic003G274000--Sobic008G048600 Sobic003G274000--Sobic001G324600 Sobic003G274000--Sobic001G287900 Sobic006G144101 Sobic006G144101 Sobic003G274000--Sobic006G144101 Sobic004G014700 Sobic004G014700 Sobic003G274000--Sobic004G014700 Sobic002G345500 Sobic002G345500 Sobic003G274000--Sobic002G345500 Sobic010G118900 Sobic010G118900 Sobic001G287900--Sobic010G118900 Sobic001G287900--Sobic007G217800 Sobic002G121900 Sobic002G121900 Sobic001G287900--Sobic002G121900 Sobic008G138200 Sobic008G138200 Sobic001G287900--Sobic008G138200 Sobic001G287900--Sobic008G031000 Sobic001G287900--Sobic003G274000 Sobic001G287900--Sobic001G152901 Sobic003G044800 Sobic003G044800 Sobic001G287900--Sobic003G044800 Sobic007G043000 Sobic007G043000 Sobic001G287900--Sobic007G043000 Sobic001G324600--Sobic006G144101 Sobic001G324600--Sobic003G411100 Sobic001G324600--Sobic002G345500 Sobic001G324600--Sobic008G071200 Sobic001G324600--Sobic002G162200 Sobic005G153300 Sobic005G153300 Sobic001G324600--Sobic005G153300 Sobic001G324600--Sobic008G182200 Sobic001G324600--Sobic008G048600 Sobic004G015100 Sobic004G015100 Sobic001G324600--Sobic004G015100 Sobic001G152901--Sobic007G217800 Sobic002G076600 Sobic002G076600 Sobic001G152901--Sobic002G076600 Sobic001G152901--Sobic004G014700 Sobic001G152901--Sobic008G138200 Sobic006G163200 Sobic006G163200 Sobic001G152901--Sobic006G163200 Sobic001G152901--Sobic001G287900 Sobic001G152901--Sobic006G131100 Sobic006G189500 Sobic006G189500 Sobic001G152901--Sobic006G189500 Sobic005G070800 Sobic005G070800 Sobic001G152901--Sobic005G070800 Sobic007G217800--Sobic001G152901 Sobic007G217800--Sobic001G287900 Sobic007G217800--Sobic004G014700 Sobic007G217800--Sobic006G189500 Sobic007G217800--Sobic002G076600 Sobic007G217800--Sobic004G195400 Sobic007G217800--Sobic008G138200 Sobic007G217800--Sobic006G163200 Sobic003G063700 Sobic003G063700 Sobic007G217800--Sobic003G063700 Sobic008G048600--Sobic003G411100 Sobic008G048600--Sobic004G014700 Sobic008G048600--Sobic004G195400 Sobic008G048600--Sobic006G144101 Sobic008G048600--Sobic006G189500 Sobic008G048600--Sobic006G131100 Sobic008G048600--Sobic002G345500 Sobic005G179700 Sobic005G179700 Sobic008G048600--Sobic005G179700 Sobic005G200400 Sobic005G200400 Sobic008G048600--Sobic005G200400 Sobic003G411100--Sobic006G144101 Sobic003G411100--Sobic008G048600 Sobic003G411100--Sobic002G345500 Sobic004G090400 Sobic004G090400 Sobic003G411100--Sobic004G090400 Sobic003G411100--Sobic005G200400 Sobic002G352501 Sobic002G352501 Sobic003G411100--Sobic002G352501 Sobic003G411100--Sobic005G179700 Sobic002G162100 Sobic002G162100 Sobic003G411100--Sobic002G162100 Sobic003G411100--Sobic004G014700 Sobic004G195400--Sobic004G014700 Sobic004G195400--Sobic008G048600 Sobic004G195400--Sobic006G189500 Sobic004G195400--Sobic003G411100 Sobic004G195400--Sobic006G131100 Sobic004G195400--Sobic002G076600 Sobic004G195400--Sobic001G324600 Sobic006G006100 Sobic006G006100 Sobic004G195400--Sobic006G006100 Sobic004G195400--Sobic006G144101
Octagon: transcription factors


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