Gene annotation
Transcriptome id Sobic.003G044800.1
Synonym Sb03g003930
Functional annotation aspartic proteinase nepenthesin-1 precursor, putative, expressed
UniProt C5XMR7
Pfam PF14541
Panther DB PTHR13683 PTHR13683:SF298
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT1G64830 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os01g08330.1 : aspartic proteinase nepenthesin-1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a035753
Brachypodium KQK03000
Barley HORVU0Hr1G030970.1 , HORVU0Hr1G030970.2 , HORVU3Hr1G022510.1 , HORVU3Hr1G022510.3 , HORVU3Hr1G022510.2 , HORVU7Hr1G019760.1 , HORVU3Hr1G022450.1 , HORVU7Hr1G019770.1 , HORVU7Hr1G019770.2
Wheat TraesCS3A02G120600 , TraesCS3D02G122900 , TraesCS7A02G088400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G141900 OsSub53 - Putative Subtilisin homologue, expressed -
2 Sobic.008G138200 RNA recognition motif family protein, expressed -
3 Sobic.001G287900 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
4 Sobic.010G118900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
5 Sobic.001G324600 cysteine proteinase inhibitor 8 precursor, putative, expressed -
6 Sobic.008G031000 LTPL26 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.008G048600 - -
8 Sobic.004G195400 heavy metal associated domain containing protein, expressed -
9 Sobic.004G056000 OsMADS29 - MADS-box family gene with MIKCc type-box, expressed -
10 Sobic.004G014700 THION20 - Plant thionin family protein precursor, putative, expressed -
11 Sobic.006G131100 - -
12 Sobic.007G217800 expressed protein -
13 Sobic.006G189500 OsMADS17 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
14 Sobic.001G009100 expressed protein -
15 Sobic.006G163200 COBRA, putative, expressed -
16 Sobic.004G072900 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.003G411100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
18 Sobic.003G063700 - -
19 Sobic.007G043000 transcription factor X1, putative, expressed -
20 Sobic.003G274000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic003G044800 Sobic003G044800 Sobic001G141900 Sobic001G141900 Sobic003G044800--Sobic001G141900 Sobic008G138200 Sobic008G138200 Sobic003G044800--Sobic008G138200 Sobic001G287900 Sobic001G287900 Sobic003G044800--Sobic001G287900 Sobic010G118900 Sobic010G118900 Sobic003G044800--Sobic010G118900 Sobic001G324600 Sobic001G324600 Sobic003G044800--Sobic001G324600 Sobic008G031000 Sobic008G031000 Sobic003G044800--Sobic008G031000 Sobic008G048600 Sobic008G048600 Sobic003G044800--Sobic008G048600 Sobic004G195400 Sobic004G195400 Sobic003G044800--Sobic004G195400 Sobic004G056000 Sobic004G056000 Sobic003G044800--Sobic004G056000 Sobic001G141900--Sobic003G044800 Sobic001G141900--Sobic008G138200 Sobic003G063700 Sobic003G063700 Sobic001G141900--Sobic003G063700 Sobic001G141900--Sobic004G056000 Sobic001G235200 Sobic001G235200 Sobic001G141900--Sobic001G235200 Sobic006G163200 Sobic006G163200 Sobic001G141900--Sobic006G163200 Sobic002G239101 Sobic002G239101 Sobic001G141900--Sobic002G239101 Sobic001G235100 Sobic001G235100 Sobic001G141900--Sobic001G235100 Sobic007G043000 Sobic007G043000 Sobic001G141900--Sobic007G043000 Sobic008G138200--Sobic007G043000 Sobic008G138200--Sobic001G235100 Sobic004G254100 Sobic004G254100 Sobic008G138200--Sobic004G254100 Sobic008G138200--Sobic001G287900 Sobic008G138200--Sobic001G141900 Sobic008G138200--Sobic003G063700 Sobic008G138200--Sobic003G044800 Sobic001G152901 Sobic001G152901 Sobic008G138200--Sobic001G152901 Sobic008G138200--Sobic001G235200 Sobic001G287900--Sobic010G118900 Sobic007G217800 Sobic007G217800 Sobic001G287900--Sobic007G217800 Sobic002G121900 Sobic002G121900 Sobic001G287900--Sobic002G121900 Sobic001G287900--Sobic008G138200 Sobic001G287900--Sobic008G031000 Sobic003G274000 Sobic003G274000 Sobic001G287900--Sobic003G274000 Sobic001G287900--Sobic001G152901 Sobic001G287900--Sobic003G044800 Sobic001G287900--Sobic007G043000 Sobic010G118900--Sobic001G287900 Sobic010G118900--Sobic003G044800 Sobic003G027200 Sobic003G027200 Sobic010G118900--Sobic003G027200 Sobic005G110448 Sobic005G110448 Sobic010G118900--Sobic005G110448 Sobic003G381100 Sobic003G381100 Sobic010G118900--Sobic003G381100 Sobic002G238900 Sobic002G238900 Sobic010G118900--Sobic002G238900 Sobic008G069600 Sobic008G069600 Sobic010G118900--Sobic008G069600 Sobic003G443900 Sobic003G443900 Sobic010G118900--Sobic003G443900 Sobic010G118900--Sobic004G056000 Sobic006G144101 Sobic006G144101 Sobic001G324600--Sobic006G144101 Sobic003G411100 Sobic003G411100 Sobic001G324600--Sobic003G411100 Sobic002G345500 Sobic002G345500 Sobic001G324600--Sobic002G345500 Sobic008G071200 Sobic008G071200 Sobic001G324600--Sobic008G071200 Sobic002G162200 Sobic002G162200 Sobic001G324600--Sobic002G162200 Sobic005G153300 Sobic005G153300 Sobic001G324600--Sobic005G153300 Sobic008G182200 Sobic008G182200 Sobic001G324600--Sobic008G182200 Sobic001G324600--Sobic008G048600 Sobic004G015100 Sobic004G015100 Sobic001G324600--Sobic004G015100 Sobic003G245500 Sobic003G245500 Sobic008G031000--Sobic003G245500 Sobic002G053201 Sobic002G053201 Sobic008G031000--Sobic002G053201 Sobic002G094900 Sobic002G094900 Sobic008G031000--Sobic002G094900 Sobic008G031000--Sobic001G324600 Sobic009G078600 Sobic009G078600 Sobic008G031000--Sobic009G078600 Sobic007G024100 Sobic007G024100 Sobic008G031000--Sobic007G024100 Sobic008G031000--Sobic008G182200 Sobic008G031000--Sobic002G162200 Sobic008G031000--Sobic008G071200 Sobic008G048600--Sobic003G411100 Sobic004G014700 Sobic004G014700 Sobic008G048600--Sobic004G014700 Sobic008G048600--Sobic004G195400 Sobic008G048600--Sobic006G144101 Sobic006G189500 Sobic006G189500 Sobic008G048600--Sobic006G189500 Sobic006G131100 Sobic006G131100 Sobic008G048600--Sobic006G131100 Sobic008G048600--Sobic002G345500 Sobic005G179700 Sobic005G179700 Sobic008G048600--Sobic005G179700 Sobic005G200400 Sobic005G200400 Sobic008G048600--Sobic005G200400 Sobic004G195400--Sobic004G014700 Sobic004G195400--Sobic008G048600 Sobic004G195400--Sobic006G189500 Sobic004G195400--Sobic003G411100 Sobic004G195400--Sobic006G131100 Sobic002G076600 Sobic002G076600 Sobic004G195400--Sobic002G076600 Sobic004G195400--Sobic001G324600 Sobic006G006100 Sobic006G006100 Sobic004G195400--Sobic006G006100 Sobic004G195400--Sobic006G144101 Sobic004G056000--Sobic003G381100 Sobic009G063700 Sobic009G063700 Sobic004G056000--Sobic009G063700 Sobic003G020800 Sobic003G020800 Sobic004G056000--Sobic003G020800 Sobic001G158100 Sobic001G158100 Sobic004G056000--Sobic001G158100 Sobic005G166100 Sobic005G166100 Sobic004G056000--Sobic005G166100 Sobic001G216400 Sobic001G216400 Sobic004G056000--Sobic001G216400 Sobic009G075500 Sobic009G075500 Sobic004G056000--Sobic009G075500 Sobic007G128200 Sobic007G128200 Sobic004G056000--Sobic007G128200 Sobic004G056000--Sobic002G239101
Octagon: transcription factors


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