Gene annotation
Transcriptome id Sobic.002G343000.4,Sobic.002G343000.3
Synonym Sb02g036685
Functional annotation expressed protein
UniProt A0A1B6QF17
Pfam PF16528
Panther DB PTHR21426 PTHR21426:SF2
NCBI CDD KOG2215; Exocyst complex subunit
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G10180 : -
RAP-DB (Rice) LOC_Os07g38060.1 : expressed protein
MaizeGDB (Corn) Zm00025a048427
Brachypodium KQK15672
Barley HORVU2Hr1G039170.2 , HORVU2Hr1G039170.4 , HORVU2Hr1G039170.5 , HORVU2Hr1G039170.1 , HORVU2Hr1G039170.3
Wheat TraesCS2B02G227800 , TraesCS2D02G208300 , TraesCS2A02G200500
Populus -


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cDNA sequences
Sobic.002G343000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G148000 anthranilate phosphoribosyltransferase, putative, expressed -
2 Sobic.006G200901 - -
3 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
4 Sobic.006G143300 nuclear transport factor 2, putative, expressed -
5 Sobic.002G253900 growth regulator related protein, putative, expressed -
6 Sobic.003G217500 expressed protein -
7 Sobic.002G230400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
8 Sobic.008G041900 expressed protein -
9 Sobic.006G186300 fasciclin-like arabinogalactan protein, putative, expressed -
10 Sobic.001G081800 GASR3 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
11 Sobic.005G018050 - -
12 Sobic.001G085200 X8 domain containing protein, expressed -
13 Sobic.005G033700 heavy-metal-associated domain-containing protein, putative, expressed -
14 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
15 Sobic.001G005800 - K10885: XRCC5, KU80, ATP-dependent DNA helicase 2 subunit 2
16 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
17 Sobic.001G541400 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.004G078500 Leucine Rich Repeat family protein, expressed -
19 Sobic.004G242200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nucleobase-ascorbate transporter, putative, expressed -
20 Sobic.003G180100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase


Gene co-expression network
sample Sobic002G343000 Sobic002G343000 Sobic009G148000 Sobic009G148000 Sobic002G343000--Sobic009G148000 Sobic006G200901 Sobic006G200901 Sobic002G343000--Sobic006G200901 Sobic004G014100 Sobic004G014100 Sobic002G343000--Sobic004G014100 Sobic006G143300 Sobic006G143300 Sobic002G343000--Sobic006G143300 Sobic002G253900 Sobic002G253900 Sobic002G343000--Sobic002G253900 Sobic003G217500 Sobic003G217500 Sobic002G343000--Sobic003G217500 Sobic002G230400 Sobic002G230400 Sobic002G343000--Sobic002G230400 Sobic008G041900 Sobic008G041900 Sobic002G343000--Sobic008G041900 Sobic006G186300 Sobic006G186300 Sobic002G343000--Sobic006G186300 Sobic009G148000--Sobic002G343000 Sobic009G148000--Sobic002G253900 Sobic009G148000--Sobic006G200901 Sobic009G148000--Sobic006G186300 Sobic009G148000--Sobic003G217500 Sobic001G005800 Sobic001G005800 Sobic009G148000--Sobic001G005800 Sobic009G148000--Sobic004G014100 Sobic009G148000--Sobic008G041900 Sobic004G250600 Sobic004G250600 Sobic009G148000--Sobic004G250600 Sobic006G200901--Sobic002G343000 Sobic006G200901--Sobic006G143300 Sobic006G200901--Sobic004G014100 Sobic006G200901--Sobic009G148000 Sobic006G200901--Sobic002G253900 Sobic006G200901--Sobic003G217500 Sobic006G200901--Sobic006G186300 Sobic006G200901--Sobic002G230400 Sobic004G075700 Sobic004G075700 Sobic006G200901--Sobic004G075700 Sobic004G014100--Sobic002G343000 Sobic004G014100--Sobic006G200901 Sobic005G160200 Sobic005G160200 Sobic004G014100--Sobic005G160200 Sobic004G014100--Sobic006G143300 Sobic003G343200 Sobic003G343200 Sobic004G014100--Sobic003G343200 Sobic002G349000 Sobic002G349000 Sobic004G014100--Sobic002G349000 Sobic004G014100--Sobic002G230400 Sobic002G354800 Sobic002G354800 Sobic004G014100--Sobic002G354800 Sobic006G140300 Sobic006G140300 Sobic004G014100--Sobic006G140300 Sobic005G033700 Sobic005G033700 Sobic006G143300--Sobic005G033700 Sobic006G143300--Sobic006G200901 Sobic006G143300--Sobic002G343000 Sobic006G143300--Sobic004G014100 Sobic001G081800 Sobic001G081800 Sobic006G143300--Sobic001G081800 Sobic006G143300--Sobic002G349000 Sobic006G143300--Sobic002G230400 Sobic005G164800 Sobic005G164800 Sobic006G143300--Sobic005G164800 Sobic006G143300--Sobic006G186300 Sobic002G253900--Sobic009G148000 Sobic001G123100 Sobic001G123100 Sobic002G253900--Sobic001G123100 Sobic002G253900--Sobic006G200901 Sobic002G253900--Sobic002G343000 Sobic002G253900--Sobic001G005800 Sobic001G540700 Sobic001G540700 Sobic002G253900--Sobic001G540700 Sobic006G218900 Sobic006G218900 Sobic002G253900--Sobic006G218900 Sobic002G284100 Sobic002G284100 Sobic002G253900--Sobic002G284100 Sobic002G006100 Sobic002G006100 Sobic002G253900--Sobic002G006100 Sobic003G217500--Sobic004G250600 Sobic003G217500--Sobic006G200901 Sobic003G217500--Sobic004G014100 Sobic003G217500--Sobic002G343000 Sobic003G217500--Sobic009G148000 Sobic003G217500--Sobic006G140300 Sobic004G196800 Sobic004G196800 Sobic003G217500--Sobic004G196800 Sobic003G304500 Sobic003G304500 Sobic003G217500--Sobic003G304500 Sobic003G217500--Sobic006G186300 Sobic002G230400--Sobic002G354800 Sobic002G230400--Sobic006G186300 Sobic002G230400--Sobic004G075700 Sobic002G230400--Sobic006G143300 Sobic002G230400--Sobic004G014100 Sobic004G163700 Sobic004G163700 Sobic002G230400--Sobic004G163700 Sobic010G112700 Sobic010G112700 Sobic002G230400--Sobic010G112700 Sobic002G230400--Sobic002G343000 Sobic010G273800 Sobic010G273800 Sobic002G230400--Sobic010G273800 Sobic005G018050 Sobic005G018050 Sobic008G041900--Sobic005G018050 Sobic008G041900--Sobic002G343000 Sobic008G041900--Sobic005G033700 Sobic008G041900--Sobic006G186300 Sobic008G041900--Sobic009G148000 Sobic007G106300 Sobic007G106300 Sobic008G041900--Sobic007G106300 Sobic006G272800 Sobic006G272800 Sobic008G041900--Sobic006G272800 Sobic010G180200 Sobic010G180200 Sobic008G041900--Sobic010G180200 Sobic010G275800 Sobic010G275800 Sobic008G041900--Sobic010G275800 Sobic010G047300 Sobic010G047300 Sobic006G186300--Sobic010G047300 Sobic007G041200 Sobic007G041200 Sobic006G186300--Sobic007G041200 Sobic002G122000 Sobic002G122000 Sobic006G186300--Sobic002G122000 Sobic006G186300--Sobic004G075700 Sobic006G186300--Sobic002G230400 Sobic010G084800 Sobic010G084800 Sobic006G186300--Sobic010G084800 Sobic001G305100 Sobic001G305100 Sobic006G186300--Sobic001G305100 Sobic005G131800 Sobic005G131800 Sobic006G186300--Sobic005G131800 Sobic005G171800 Sobic005G171800 Sobic006G186300--Sobic005G171800
Octagon: transcription factors


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