Gene annotation
Transcriptome id Sobic.003G180100.1
Synonym ATGSL07, Sb03g023520, atgsl7, gsl07
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
1,3-beta-glucan synthase component domain containing protein, expressed
UniProt H0I4G5 , C5XMA1
Pfam PF14288 PF02364
Panther DB PTHR12741 PTHR12741:SF13
NCBI CDD -
KEGG Orthology K11000; callose synthase
Gene Ontology GO:0016020; membrane GO:0006075(1->3)-beta-D-glucan biosynthetic process GO:00038431,3-beta-D-glucan synthase activity GO:00001481,3-beta-D-glucan synthase complex


Orthologs (automatic annotation)
TAIR AT1G06490 : glucan synthase-like 7
RAP-DB (Rice) LOC_Os03g03610.1 : 1,3-beta-glucan synthase component domain containing protein, expressed
MaizeGDB (Corn) Zm00025a028844
Brachypodium PNT72150 , KQK08202 , KQK08201 , KQK08199
Barley HORVU3Hr1G058470.42 , HORVU3Hr1G058470.43 , HORVU3Hr1G058470.40 , HORVU3Hr1G058470.41 , HORVU3Hr1G058470.46 , HORVU3Hr1G058470.47 , HORVU3Hr1G058470.44 , HORVU3Hr1G058470.45 , HORVU3Hr1G058470.48 , HORVU3Hr1G058470.49 , HORVU2Hr1G118600.27 , HORVU2Hr1G118600.26 , HORVU2Hr1G118600.25 , HORVU2Hr1G118600.24 , HORVU2Hr1G118600.23 , HORVU2Hr1G118600.22 , HORVU3Hr1G058470.72 , HORVU3Hr1G058470.71 , HORVU3Hr1G058470.70 , HORVU3Hr1G042600.48 , HORVU3Hr1G042600.49 , HORVU3Hr1G042600.47 , HORVU3Hr1G042600.44 , HORVU3Hr1G042600.45 , HORVU3Hr1G058470.58 , HORVU3Hr1G042600.38 , HORVU3Hr1G042600.32 , HORVU3Hr1G042600.31 , HORVU3Hr1G058470.52 , HORVU3Hr1G042600.30 , HORVU3Hr1G042600.37 , HORVU3Hr1G042600.35 , HORVU3Hr1G042600.34 , HORVU3Hr1G058470.59 , HORVU3Hr1G058470.37 , HORVU3Hr1G058470.36 , HORVU3Hr1G058470.35 , HORVU3Hr1G058470.34 , HORVU3Hr1G058470.33 , HORVU3Hr1G058470.32 , HORVU3Hr1G058470.31 , HORVU3Hr1G058470.30 , HORVU3Hr1G058470.39 , HORVU3Hr1G058470.38 , HORVU3Hr1G058470.9 , HORVU3Hr1G058470.8 , HORVU3Hr1G058470.4 , HORVU3Hr1G058470.7 , HORVU3Hr1G058470.6 , HORVU3Hr1G058470.1 , HORVU3Hr1G058470.3 , HORVU3Hr1G058470.2 , HORVU2Hr1G118600.6 , HORVU2Hr1G118600.7 , HORVU2Hr1G118600.2 , HORVU2Hr1G118600.3 , HORVU2Hr1G118600.8 , HORVU2Hr1G118600.37 , HORVU2Hr1G118600.31 , HORVU2Hr1G118600.32 , HORVU2Hr1G118600.33 , HORVU3Hr1G058470.68 , HORVU3Hr1G058470.69 , HORVU3Hr1G058470.60 , HORVU3Hr1G058470.61 , HORVU3Hr1G058470.62 , HORVU3Hr1G058470.63 , HORVU3Hr1G058470.64 , HORVU3Hr1G058470.65 , HORVU3Hr1G058470.66 , HORVU3Hr1G058470.67 , HORVU3Hr1G042600.9 , HORVU3Hr1G042600.8 , HORVU3Hr1G042600.1 , HORVU3Hr1G042600.7 , HORVU3Hr1G042600.6 , HORVU3Hr1G042600.25 , HORVU3Hr1G042600.26 , HORVU3Hr1G042600.27 , HORVU2Hr1G118600.41 , HORVU2Hr1G118600.43 , HORVU2Hr1G118600.42 , HORVU3Hr1G058470.24 , HORVU3Hr1G058470.25 , HORVU3Hr1G058470.26 , HORVU3Hr1G058470.27 , HORVU3Hr1G058470.20 , HORVU3Hr1G058470.21 , HORVU3Hr1G058470.22 , HORVU3Hr1G058470.23 , HORVU3Hr1G058470.28 , HORVU3Hr1G058470.29 , HORVU3Hr1G058470.55 , HORVU3Hr1G058470.54 , HORVU3Hr1G058470.57 , HORVU3Hr1G058470.56 , HORVU3Hr1G058470.51 , HORVU3Hr1G058470.50 , HORVU3Hr1G058470.53 , HORVU3Hr1G042600.15 , HORVU3Hr1G042600.16 , HORVU3Hr1G042600.11 , HORVU3Hr1G042600.10 , HORVU3Hr1G042600.12 , HORVU2Hr1G118600.59 , HORVU2Hr1G118600.52 , HORVU2Hr1G118600.50 , HORVU2Hr1G118600.51 , HORVU3Hr1G058470.5 , HORVU3Hr1G058470.19 , HORVU3Hr1G058470.18 , HORVU3Hr1G058470.11 , HORVU3Hr1G058470.10 , HORVU3Hr1G058470.13 , HORVU3Hr1G058470.12 , HORVU3Hr1G058470.15 , HORVU3Hr1G058470.14 , HORVU3Hr1G058470.17 , HORVU3Hr1G058470.16 , HORVU3Hr1G042600.51 , HORVU3Hr1G042600.52 , HORVU3Hr1G042600.54 , HORVU3Hr1G042600.56 , HORVU2Hr1G118600.16 , HORVU2Hr1G118600.17 , HORVU2Hr1G118600.10 , HORVU2Hr1G118600.11 , HORVU2Hr1G118600.18 , HORVU2Hr1G118600.19 , HORVU2Hr1G118600.62 , HORVU2Hr1G118600.61 , HORVU2Hr1G118600.60
Wheat TraesCS3A02G202000 , TraesCS3A02G202000 , TraesCS3D02G201500 , TraesCS3D02G201500 , TraesCS3B02G230100 , TraesCS2D02G600000 , TraesCS3B02G230100 , TraesCS3B02G230100 , TraesCSU02G021500 , TraesCS3B02G229700 , TraesCS2D02G600000 , TraesCS5D02G111000 , TraesCS5D02G111000 , TraesCS5D02G111000 , TraesCS5D02G111000 , TraesCS2A02G586600 , TraesCS3A02G197500 , TraesCS3A02G197600 , TraesCS3A02G197600 , TraesCS6B02G001900 , TraesCS3A02G197600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G148000 anthranilate phosphoribosyltransferase, putative, expressed -
2 Sobic.002G343000 expressed protein -
3 Sobic.001G429200 AT hook motif family protein, expressed -
4 Sobic.003G161800 exportin 1, putative, expressed K14289: exportin-5
5 Sobic.001G541400 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.005G074400 OsPDIL1-1 protein disulfide isomerase PDIL1-1, expressed K09580: PDIA1, protein disulfide-isomerase A1
7 Sobic.006G200901 - -
8 Sobic.002G390400 expressed protein -
9 Sobic.004G242200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nucleobase-ascorbate transporter, putative, expressed -
10 Sobic.006G179400 niemann-Pick C1 protein precursor, putative, expressed K12385: Niemann-Pick C1 protein
11 Sobic.010G112700 NHL repeat-containing protein, putative, expressed -
12 Sobic.002G230400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
13 Sobic.003G103701 - K04728: ATM, serine-protein kinase ATM
14 Sobic.001G085200 X8 domain containing protein, expressed -
15 Sobic.008G118100 kelch repeat protein, putative, expressed -
16 Sobic.007G072100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBL44 - F-box domain and LRR containing protein, expressed -
17 Sobic.008G116100 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
18 Sobic.003G026900 expressed protein -
19 Sobic.004G075700 PHD-finger domain containing protein, putative, expressed -
20 Sobic.009G030400 eyes absent homolog 4, putative, expressed -


Gene co-expression network
sample Sobic003G180100 Sobic003G180100 Sobic009G148000 Sobic009G148000 Sobic003G180100--Sobic009G148000 Sobic002G343000 Sobic002G343000 Sobic003G180100--Sobic002G343000 Sobic001G429200 Sobic001G429200 Sobic003G180100--Sobic001G429200 Sobic003G161800 Sobic003G161800 Sobic003G180100--Sobic003G161800 Sobic001G541400 Sobic001G541400 Sobic003G180100--Sobic001G541400 Sobic005G074400 Sobic005G074400 Sobic003G180100--Sobic005G074400 Sobic006G200901 Sobic006G200901 Sobic003G180100--Sobic006G200901 Sobic002G390400 Sobic002G390400 Sobic003G180100--Sobic002G390400 Sobic004G242200 Sobic004G242200 Sobic003G180100--Sobic004G242200 Sobic009G148000--Sobic002G343000 Sobic002G253900 Sobic002G253900 Sobic009G148000--Sobic002G253900 Sobic009G148000--Sobic006G200901 Sobic006G186300 Sobic006G186300 Sobic009G148000--Sobic006G186300 Sobic003G217500 Sobic003G217500 Sobic009G148000--Sobic003G217500 Sobic001G005800 Sobic001G005800 Sobic009G148000--Sobic001G005800 Sobic004G014100 Sobic004G014100 Sobic009G148000--Sobic004G014100 Sobic008G041900 Sobic008G041900 Sobic009G148000--Sobic008G041900 Sobic004G250600 Sobic004G250600 Sobic009G148000--Sobic004G250600 Sobic002G343000--Sobic009G148000 Sobic002G343000--Sobic006G200901 Sobic002G343000--Sobic004G014100 Sobic006G143300 Sobic006G143300 Sobic002G343000--Sobic006G143300 Sobic002G343000--Sobic002G253900 Sobic002G343000--Sobic003G217500 Sobic002G230400 Sobic002G230400 Sobic002G343000--Sobic002G230400 Sobic002G343000--Sobic008G041900 Sobic002G343000--Sobic006G186300 Sobic001G429200--Sobic002G390400 Sobic001G429200--Sobic003G180100 Sobic001G346700 Sobic001G346700 Sobic001G429200--Sobic001G346700 Sobic004G050300 Sobic004G050300 Sobic001G429200--Sobic004G050300 Sobic010G052400 Sobic010G052400 Sobic001G429200--Sobic010G052400 Sobic009G069200 Sobic009G069200 Sobic001G429200--Sobic009G069200 Sobic001G115500 Sobic001G115500 Sobic001G429200--Sobic001G115500 Sobic001G507200 Sobic001G507200 Sobic001G429200--Sobic001G507200 Sobic003G415100 Sobic003G415100 Sobic001G429200--Sobic003G415100 Sobic002G254800 Sobic002G254800 Sobic003G161800--Sobic002G254800 Sobic001G373000 Sobic001G373000 Sobic003G161800--Sobic001G373000 Sobic009G030400 Sobic009G030400 Sobic003G161800--Sobic009G030400 Sobic006G179400 Sobic006G179400 Sobic003G161800--Sobic006G179400 Sobic003G161800--Sobic003G180100 Sobic010G236200 Sobic010G236200 Sobic003G161800--Sobic010G236200 Sobic005G030100 Sobic005G030100 Sobic003G161800--Sobic005G030100 Sobic009G113100 Sobic009G113100 Sobic003G161800--Sobic009G113100 Sobic003G161800--Sobic001G115500 Sobic002G197800 Sobic002G197800 Sobic001G541400--Sobic002G197800 Sobic002G273000 Sobic002G273000 Sobic001G541400--Sobic002G273000 Sobic010G195450 Sobic010G195450 Sobic001G541400--Sobic010G195450 Sobic010G195301 Sobic010G195301 Sobic001G541400--Sobic010G195301 Sobic001G085200 Sobic001G085200 Sobic001G541400--Sobic001G085200 Sobic009G201100 Sobic009G201100 Sobic001G541400--Sobic009G201100 Sobic005G176875 Sobic005G176875 Sobic001G541400--Sobic005G176875 Sobic002G066000 Sobic002G066000 Sobic001G541400--Sobic002G066000 Sobic004G286301 Sobic004G286301 Sobic001G541400--Sobic004G286301 Sobic004G075700 Sobic004G075700 Sobic005G074400--Sobic004G075700 Sobic005G074400--Sobic002G273000 Sobic003G430100 Sobic003G430100 Sobic005G074400--Sobic003G430100 Sobic004G210000 Sobic004G210000 Sobic005G074400--Sobic004G210000 Sobic005G074400--Sobic005G176875 Sobic001G269650 Sobic001G269650 Sobic005G074400--Sobic001G269650 Sobic005G074400--Sobic006G200901 Sobic009G132650 Sobic009G132650 Sobic005G074400--Sobic009G132650 Sobic008G184500 Sobic008G184500 Sobic005G074400--Sobic008G184500 Sobic006G200901--Sobic002G343000 Sobic006G200901--Sobic006G143300 Sobic006G200901--Sobic004G014100 Sobic006G200901--Sobic009G148000 Sobic006G200901--Sobic002G253900 Sobic006G200901--Sobic003G217500 Sobic006G200901--Sobic006G186300 Sobic006G200901--Sobic002G230400 Sobic006G200901--Sobic004G075700 Sobic001G135500 Sobic001G135500 Sobic002G390400--Sobic001G135500 Sobic002G390400--Sobic003G415100 Sobic002G390400--Sobic009G069200 Sobic005G198200 Sobic005G198200 Sobic002G390400--Sobic005G198200 Sobic002G390400--Sobic005G030100 Sobic002G390400--Sobic009G030400 Sobic002G390400--Sobic009G113100 Sobic008G156200 Sobic008G156200 Sobic002G390400--Sobic008G156200 Sobic002G390400--Sobic001G429200 Sobic002G420400 Sobic002G420400 Sobic004G242200--Sobic002G420400 Sobic001G456400 Sobic001G456400 Sobic004G242200--Sobic001G456400 Sobic005G036200 Sobic005G036200 Sobic004G242200--Sobic005G036200 Sobic009G002200 Sobic009G002200 Sobic004G242200--Sobic009G002200 Sobic001G375800 Sobic001G375800 Sobic004G242200--Sobic001G375800 Sobic007G192200 Sobic007G192200 Sobic004G242200--Sobic007G192200 Sobic004G339900 Sobic004G339900 Sobic004G242200--Sobic004G339900 Sobic010G152000 Sobic010G152000 Sobic004G242200--Sobic010G152000 Sobic004G071050 Sobic004G071050 Sobic004G242200--Sobic004G071050
Octagon: transcription factors


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